Experiment: MoYLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2731 and DVU2732 are separated by 300 nucleotides DVU2732 and DVU2733 overlap by 28 nucleotides DVU2733 and tRNA-Leu are separated by 283 nucleotides tRNA-Leu and DORF43423 are separated by 331 nucleotides
DVU2731: DVU2731 - tail fiber assembly protein, putative (TIGR), at 2,832,574 to 2,833,113
DVU2731
DVU2732: DVU2732 - conserved hypothetical protein (TIGR), at 2,833,414 to 2,833,614
DVU2732
DVU2733: DVU2733 - adenine specific DNA methyltransferase, putative (TIGR), at 2,833,587 to 2,834,336
DVU2733
DVU_tRNA-Leu-7: tRNA-Leu - tRNA with anticodon GAG for Leu (VIMSS-AUTO), at 2,834,620 to 2,834,706
tRNA-Leu
DORF43423: DORF43423 - SEED: Uncharacterized protein conserved in archaea, at 2,835,038 to 2,836,108
DORF43423
Position (kb)
2833
2834
2835 Strain fitness (log2 ratio)
-2
-1
0
1 at 2832.615 kb on + strand at 2832.615 kb on + strand at 2832.655 kb on + strand, within DVU2731 at 2832.684 kb on + strand, within DVU2731 at 2832.686 kb on + strand, within DVU2731 at 2832.686 kb on + strand, within DVU2731 at 2832.694 kb on - strand, within DVU2731 at 2832.711 kb on - strand, within DVU2731 at 2832.789 kb on + strand, within DVU2731 at 2832.789 kb on + strand, within DVU2731 at 2832.789 kb on + strand, within DVU2731 at 2832.789 kb on + strand, within DVU2731 at 2832.789 kb on + strand, within DVU2731 at 2832.842 kb on + strand, within DVU2731 at 2832.864 kb on + strand, within DVU2731 at 2832.991 kb on - strand, within DVU2731 at 2833.042 kb on - strand, within DVU2731 at 2833.121 kb on - strand at 2833.285 kb on + strand at 2833.306 kb on + strand at 2833.314 kb on - strand at 2833.346 kb on + strand at 2833.351 kb on + strand at 2833.351 kb on + strand at 2833.351 kb on + strand at 2833.356 kb on + strand at 2833.364 kb on - strand at 2833.364 kb on - strand at 2833.364 kb on - strand at 2833.364 kb on - strand at 2833.491 kb on - strand, within DVU2732 at 2833.492 kb on - strand, within DVU2732 at 2833.492 kb on - strand, within DVU2732 at 2833.492 kb on - strand, within DVU2732 at 2833.519 kb on + strand, within DVU2732 at 2833.527 kb on - strand, within DVU2732 at 2833.578 kb on + strand, within DVU2732 at 2833.586 kb on - strand, within DVU2732 at 2833.619 kb on + strand at 2833.633 kb on + strand at 2833.635 kb on - strand at 2833.649 kb on + strand at 2833.680 kb on - strand, within DVU2733 at 2833.692 kb on - strand, within DVU2733 at 2833.748 kb on - strand, within DVU2733 at 2833.755 kb on - strand, within DVU2733 at 2833.765 kb on - strand, within DVU2733 at 2833.967 kb on + strand, within DVU2733 at 2833.975 kb on - strand, within DVU2733 at 2833.998 kb on - strand, within DVU2733 at 2833.998 kb on - strand, within DVU2733 at 2834.019 kb on - strand, within DVU2733 at 2834.063 kb on + strand, within DVU2733 at 2834.141 kb on + strand, within DVU2733 at 2834.149 kb on - strand, within DVU2733 at 2834.149 kb on - strand, within DVU2733 at 2834.239 kb on - strand, within DVU2733 at 2834.289 kb on + strand at 2834.289 kb on + strand at 2834.302 kb on + strand at 2834.333 kb on - strand at 2834.456 kb on - strand at 2834.501 kb on + strand at 2834.501 kb on + strand at 2834.501 kb on + strand at 2834.509 kb on - strand at 2834.817 kb on + strand at 2834.906 kb on - strand at 2834.936 kb on + strand at 2834.997 kb on + strand at 2835.031 kb on + strand at 2835.087 kb on + strand at 2835.301 kb on + strand, within DORF43423 at 2835.301 kb on + strand, within DORF43423 at 2835.309 kb on - strand, within DORF43423 at 2835.327 kb on + strand, within DORF43423
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chlorate 6.25 mM remove 2,832,615 + -1.1 2,832,615 + -0.1 2,832,655 + DVU2731 0.15 -0.0 2,832,684 + DVU2731 0.20 +0.6 2,832,686 + DVU2731 0.21 -0.5 2,832,686 + DVU2731 0.21 -0.0 2,832,694 - DVU2731 0.22 -1.3 2,832,711 - DVU2731 0.25 +0.5 2,832,789 + DVU2731 0.40 +0.6 2,832,789 + DVU2731 0.40 -0.1 2,832,789 + DVU2731 0.40 -1.7 2,832,789 + DVU2731 0.40 -0.6 2,832,789 + DVU2731 0.40 -0.4 2,832,842 + DVU2731 0.50 -0.3 2,832,864 + DVU2731 0.54 +0.3 2,832,991 - DVU2731 0.77 +0.0 2,833,042 - DVU2731 0.87 +0.1 2,833,121 - -0.3 2,833,285 + +0.1 2,833,306 + +0.2 2,833,314 - -0.1 2,833,346 + -0.5 2,833,351 + -0.1 2,833,351 + +0.7 2,833,351 + -1.1 2,833,356 + -0.9 2,833,364 - -0.9 2,833,364 - +0.1 2,833,364 - +1.0 2,833,364 - -0.4 2,833,491 - DVU2732 0.38 +0.1 2,833,492 - DVU2732 0.39 -0.9 2,833,492 - DVU2732 0.39 -0.5 2,833,492 - DVU2732 0.39 -0.2 2,833,519 + DVU2732 0.52 +0.2 2,833,527 - DVU2732 0.56 -1.0 2,833,578 + DVU2732 0.82 -0.1 2,833,586 - DVU2732 0.86 -0.7 2,833,619 + -1.4 2,833,633 + -0.2 2,833,635 - -1.0 2,833,649 + -0.6 2,833,680 - DVU2733 0.12 -0.8 2,833,692 - DVU2733 0.14 -2.1 2,833,748 - DVU2733 0.21 -1.2 2,833,755 - DVU2733 0.22 -0.6 2,833,765 - DVU2733 0.24 -1.8 2,833,967 + DVU2733 0.51 -0.3 2,833,975 - DVU2733 0.52 -0.8 2,833,998 - DVU2733 0.55 -2.4 2,833,998 - DVU2733 0.55 -0.3 2,834,019 - DVU2733 0.58 +0.2 2,834,063 + DVU2733 0.63 -0.1 2,834,141 + DVU2733 0.74 -0.2 2,834,149 - DVU2733 0.75 +0.0 2,834,149 - DVU2733 0.75 -0.8 2,834,239 - DVU2733 0.87 +0.1 2,834,289 + -0.1 2,834,289 + +0.0 2,834,302 + -1.5 2,834,333 - -0.2 2,834,456 - -0.5 2,834,501 + -0.5 2,834,501 + -0.0 2,834,501 + -1.4 2,834,509 - +0.0 2,834,817 + +0.3 2,834,906 - -0.2 2,834,936 + -0.3 2,834,997 + +0.2 2,835,031 + -0.5 2,835,087 + -0.2 2,835,301 + DORF43423 0.25 +0.2 2,835,301 + DORF43423 0.25 +0.0 2,835,309 - DORF43423 0.25 -0.3 2,835,327 + DORF43423 0.27 +0.3
Or see this region's nucleotide sequence