Experiment: MoYLS4 with Chlorate 6.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1280 and DVU1281 are separated by 1 nucleotides DVU1281 and glmM are separated by 59 nucleotides glmM and galU are separated by 37 nucleotides galU and priA are separated by 75 nucleotides
DVU1280: DVU1280 - conserved hypothetical protein TIGR00159 (TIGR), at 1,372,822 to 1,373,568
DVU1280
DVU1281: DVU1281 - conserved hypothetical protein (TIGR), at 1,373,570 to 1,374,472
DVU1281
DVU1282: glmM - phosphoglucosamine mutase (TIGR), at 1,374,532 to 1,375,884
glmM
DVU1283: galU - UTP-glucose-1-phosphate uridylyltransferase (TIGR), at 1,375,922 to 1,376,800
galU
DVU1284: priA - primosomal protein n (TIGR), at 1,376,876 to 1,379,254
priA
Position (kb)
1374
1375
1376 Strain fitness (log2 ratio)
-1
0
1 at 1373.816 kb on + strand, within DVU1281 at 1373.841 kb on - strand, within DVU1281 at 1374.004 kb on - strand, within DVU1281 at 1374.026 kb on - strand, within DVU1281 at 1374.135 kb on + strand, within DVU1281 at 1374.166 kb on + strand, within DVU1281 at 1374.261 kb on - strand, within DVU1281 at 1374.293 kb on - strand, within DVU1281 at 1374.315 kb on + strand, within DVU1281 at 1374.325 kb on + strand, within DVU1281 at 1374.331 kb on - strand, within DVU1281 at 1374.345 kb on + strand, within DVU1281 at 1374.363 kb on + strand, within DVU1281 at 1374.409 kb on - strand at 1374.428 kb on - strand at 1374.444 kb on - strand at 1375.886 kb on + strand at 1375.926 kb on - strand at 1375.961 kb on + strand at 1376.137 kb on + strand, within galU at 1376.380 kb on + strand, within galU at 1376.524 kb on - strand, within galU at 1376.643 kb on + strand, within galU at 1376.788 kb on - strand at 1376.833 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chlorate 6.25 mM remove 1,373,816 + DVU1281 0.27 -0.3 1,373,841 - DVU1281 0.30 -0.1 1,374,004 - DVU1281 0.48 -0.1 1,374,026 - DVU1281 0.50 -0.3 1,374,135 + DVU1281 0.63 -0.8 1,374,166 + DVU1281 0.66 -0.2 1,374,261 - DVU1281 0.77 +0.4 1,374,293 - DVU1281 0.80 +0.3 1,374,315 + DVU1281 0.83 -0.8 1,374,325 + DVU1281 0.84 -0.4 1,374,331 - DVU1281 0.84 -0.2 1,374,345 + DVU1281 0.86 -0.3 1,374,363 + DVU1281 0.88 -1.5 1,374,409 - -0.9 1,374,428 - -1.3 1,374,444 - -1.3 1,375,886 + -1.0 1,375,926 - -0.9 1,375,961 + +0.3 1,376,137 + galU DVU1283 0.24 -1.0 1,376,380 + galU DVU1283 0.52 +0.7 1,376,524 - galU DVU1283 0.68 +0.6 1,376,643 + galU DVU1283 0.82 +0.5 1,376,788 - +0.5 1,376,833 + -0.5
Or see this region's nucleotide sequence