Experiment: MoYLS4 with Chloride 125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0710 and DVU0711 are separated by 83 nucleotides DVU0711 and DVU0712 are separated by 366 nucleotides
DVU0710: DVU0710 - competence protein comM, putative (TIGR), at 788,925 to 790,589
DVU0710
DVU0711: DVU0711 - hypothetical protein (TIGR), at 790,673 to 791,314
DVU0711
DVU0712: DVU0712 - amino acid ABC transporter, periplasmic-binding protein (TIGR), at 791,681 to 792,811
DVU0712
Position (kb) 790
791
792 Strain fitness (log2 ratio) -2
-1
0
1 at 789.755 kb on + strand, within DVU0710 at 789.796 kb on + strand, within DVU0710 at 789.796 kb on + strand, within DVU0710 at 789.796 kb on + strand, within DVU0710 at 789.796 kb on + strand, within DVU0710 at 789.804 kb on - strand, within DVU0710 at 789.804 kb on - strand, within DVU0710 at 789.812 kb on + strand, within DVU0710 at 789.812 kb on + strand, within DVU0710 at 789.812 kb on + strand, within DVU0710 at 789.820 kb on - strand, within DVU0710 at 789.820 kb on - strand, within DVU0710 at 789.820 kb on - strand, within DVU0710 at 789.843 kb on + strand, within DVU0710 at 789.869 kb on + strand, within DVU0710 at 789.881 kb on + strand, within DVU0710 at 789.958 kb on + strand, within DVU0710 at 789.963 kb on + strand, within DVU0710 at 790.068 kb on + strand, within DVU0710 at 790.070 kb on + strand, within DVU0710 at 790.070 kb on + strand, within DVU0710 at 790.078 kb on - strand, within DVU0710 at 790.102 kb on + strand, within DVU0710 at 790.102 kb on - strand, within DVU0710 at 790.106 kb on + strand, within DVU0710 at 790.108 kb on + strand, within DVU0710 at 790.140 kb on + strand, within DVU0710 at 790.148 kb on - strand, within DVU0710 at 790.338 kb on - strand, within DVU0710 at 790.406 kb on + strand, within DVU0710 at 790.506 kb on + strand at 790.574 kb on - strand at 790.699 kb on - strand at 790.699 kb on - strand at 790.701 kb on - strand at 790.781 kb on - strand, within DVU0711 at 790.808 kb on + strand, within DVU0711 at 790.808 kb on + strand, within DVU0711 at 790.816 kb on - strand, within DVU0711 at 790.820 kb on + strand, within DVU0711 at 790.855 kb on + strand, within DVU0711 at 790.858 kb on - strand, within DVU0711 at 790.878 kb on - strand, within DVU0711 at 790.938 kb on - strand, within DVU0711 at 791.015 kb on + strand, within DVU0711 at 791.035 kb on - strand, within DVU0711 at 791.035 kb on - strand, within DVU0711 at 791.197 kb on - strand, within DVU0711 at 791.205 kb on + strand, within DVU0711 at 791.260 kb on + strand at 791.316 kb on - strand at 791.321 kb on + strand at 791.327 kb on + strand at 791.332 kb on + strand at 791.354 kb on + strand at 791.359 kb on + strand at 791.359 kb on + strand at 791.359 kb on + strand at 791.367 kb on - strand at 791.367 kb on - strand at 791.422 kb on - strand at 791.464 kb on - strand at 791.631 kb on + strand at 791.636 kb on + strand at 791.636 kb on + strand at 791.636 kb on + strand at 791.636 kb on + strand at 791.644 kb on - strand at 791.644 kb on - strand at 791.644 kb on - strand at 791.654 kb on - strand at 791.654 kb on - strand at 791.658 kb on + strand at 791.690 kb on + strand at 791.805 kb on + strand, within DVU0712 at 791.810 kb on + strand, within DVU0712 at 791.810 kb on + strand, within DVU0712 at 791.818 kb on - strand, within DVU0712 at 791.850 kb on - strand, within DVU0712 at 791.852 kb on - strand, within DVU0712 at 791.933 kb on - strand, within DVU0712 at 791.933 kb on - strand, within DVU0712 at 792.016 kb on + strand, within DVU0712 at 792.113 kb on - strand, within DVU0712 at 792.154 kb on + strand, within DVU0712 at 792.223 kb on + strand, within DVU0712 at 792.223 kb on + strand, within DVU0712 at 792.231 kb on - strand, within DVU0712 at 792.287 kb on - strand, within DVU0712
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chloride 125 mM remove 789,755 + DVU0710 0.50 +0.3 789,796 + DVU0710 0.52 -0.1 789,796 + DVU0710 0.52 -2.1 789,796 + DVU0710 0.52 -0.5 789,796 + DVU0710 0.52 -0.6 789,804 - DVU0710 0.53 +0.1 789,804 - DVU0710 0.53 +0.2 789,812 + DVU0710 0.53 -1.0 789,812 + DVU0710 0.53 -0.4 789,812 + DVU0710 0.53 +0.2 789,820 - DVU0710 0.54 -0.1 789,820 - DVU0710 0.54 -0.4 789,820 - DVU0710 0.54 +0.5 789,843 + DVU0710 0.55 -0.4 789,869 + DVU0710 0.57 -0.0 789,881 + DVU0710 0.57 -0.3 789,958 + DVU0710 0.62 -0.1 789,963 + DVU0710 0.62 -0.0 790,068 + DVU0710 0.69 -1.4 790,070 + DVU0710 0.69 -0.2 790,070 + DVU0710 0.69 +0.1 790,078 - DVU0710 0.69 +0.3 790,102 + DVU0710 0.71 +0.3 790,102 - DVU0710 0.71 -0.5 790,106 + DVU0710 0.71 +0.0 790,108 + DVU0710 0.71 +0.2 790,140 + DVU0710 0.73 +0.4 790,148 - DVU0710 0.73 -0.2 790,338 - DVU0710 0.85 +0.5 790,406 + DVU0710 0.89 -0.1 790,506 + -0.1 790,574 - +0.4 790,699 - -0.6 790,699 - -0.4 790,701 - -0.2 790,781 - DVU0711 0.17 -0.6 790,808 + DVU0711 0.21 -0.3 790,808 + DVU0711 0.21 -2.4 790,816 - DVU0711 0.22 -0.1 790,820 + DVU0711 0.23 -1.3 790,855 + DVU0711 0.28 +0.5 790,858 - DVU0711 0.29 -0.7 790,878 - DVU0711 0.32 -2.5 790,938 - DVU0711 0.41 -1.6 791,015 + DVU0711 0.53 -1.0 791,035 - DVU0711 0.56 -0.4 791,035 - DVU0711 0.56 +0.2 791,197 - DVU0711 0.82 +0.8 791,205 + DVU0711 0.83 -0.4 791,260 + -0.4 791,316 - -0.4 791,321 + -0.0 791,327 + -0.0 791,332 + -0.4 791,354 + -0.3 791,359 + +0.3 791,359 + -0.7 791,359 + -0.0 791,367 - +0.1 791,367 - +0.5 791,422 - +0.1 791,464 - -0.1 791,631 + +0.0 791,636 + -1.6 791,636 + +0.3 791,636 + +0.8 791,636 + +1.3 791,644 - -0.3 791,644 - +0.6 791,644 - -0.9 791,654 - +0.2 791,654 - +0.3 791,658 + -0.2 791,690 + +0.1 791,805 + DVU0712 0.11 +0.4 791,810 + DVU0712 0.11 -0.4 791,810 + DVU0712 0.11 -0.4 791,818 - DVU0712 0.12 -0.3 791,850 - DVU0712 0.15 -1.9 791,852 - DVU0712 0.15 -0.1 791,933 - DVU0712 0.22 -0.0 791,933 - DVU0712 0.22 +0.6 792,016 + DVU0712 0.30 +0.0 792,113 - DVU0712 0.38 +1.2 792,154 + DVU0712 0.42 +1.0 792,223 + DVU0712 0.48 -1.4 792,223 + DVU0712 0.48 -1.1 792,231 - DVU0712 0.49 -0.4 792,287 - DVU0712 0.54 -0.2
Or see this region's nucleotide sequence