Experiment: MoYLS4 with Chloride 125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0215 and DVU0216 are separated by 1 nucleotides DVU0216 and DVU0217 are separated by 1 nucleotides DVU0217 and DVU0218 are separated by 8 nucleotides
DVU0215: DVU0215 - tail protein, putative (TIGR), at 255,790 to 256,923
DVU0215
DVU0216: DVU0216 - phage baseplate assembly protein V, putative (TIGR), at 256,925 to 257,563
DVU0216
DVU0217: DVU0217 - tail protein, putative (TIGR), at 257,565 to 258,041
DVU0217
DVU0218: DVU0218 - tail protein, putative (TIGR), at 258,050 to 259,111
DVU0218
Position (kb) 256
257
258 Strain fitness (log2 ratio) -2
-1
0
1 at 255.932 kb on - strand, within DVU0215 at 256.100 kb on + strand, within DVU0215 at 256.105 kb on + strand, within DVU0215 at 256.167 kb on - strand, within DVU0215 at 256.173 kb on - strand, within DVU0215 at 256.180 kb on - strand, within DVU0215 at 256.287 kb on + strand, within DVU0215 at 256.337 kb on + strand, within DVU0215 at 256.376 kb on - strand, within DVU0215 at 256.851 kb on + strand at 256.871 kb on - strand at 257.185 kb on + strand, within DVU0216 at 257.230 kb on + strand, within DVU0216 at 257.230 kb on + strand, within DVU0216 at 257.236 kb on - strand, within DVU0216 at 257.357 kb on + strand, within DVU0216 at 257.374 kb on - strand, within DVU0216 at 257.386 kb on + strand, within DVU0216 at 257.411 kb on - strand, within DVU0216 at 257.605 kb on + strand at 257.663 kb on - strand, within DVU0217 at 257.668 kb on - strand, within DVU0217 at 257.673 kb on - strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.906 kb on - strand, within DVU0217 at 257.913 kb on - strand, within DVU0217 at 257.927 kb on + strand, within DVU0217 at 258.082 kb on + strand at 258.221 kb on + strand, within DVU0218 at 258.274 kb on + strand, within DVU0218 at 258.282 kb on - strand, within DVU0218 at 258.282 kb on - strand, within DVU0218 at 258.282 kb on - strand, within DVU0218
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Chloride 125 mM remove 255,932 - DVU0215 0.13 -0.8 256,100 + DVU0215 0.27 -0.2 256,105 + DVU0215 0.28 -0.1 256,167 - DVU0215 0.33 -0.6 256,173 - DVU0215 0.34 +0.6 256,180 - DVU0215 0.34 -0.2 256,287 + DVU0215 0.44 -0.0 256,337 + DVU0215 0.48 -0.2 256,376 - DVU0215 0.52 -0.1 256,851 + -0.9 256,871 - +0.2 257,185 + DVU0216 0.41 -1.2 257,230 + DVU0216 0.48 -0.7 257,230 + DVU0216 0.48 -1.9 257,236 - DVU0216 0.49 -0.1 257,357 + DVU0216 0.68 +0.1 257,374 - DVU0216 0.70 -0.3 257,386 + DVU0216 0.72 -0.2 257,411 - DVU0216 0.76 -0.0 257,605 + -0.4 257,663 - DVU0217 0.21 +0.2 257,668 - DVU0217 0.22 +0.2 257,673 - DVU0217 0.23 -1.3 257,905 + DVU0217 0.71 -0.4 257,905 + DVU0217 0.71 -0.4 257,905 + DVU0217 0.71 +0.2 257,905 + DVU0217 0.71 +0.1 257,906 - DVU0217 0.71 -0.2 257,913 - DVU0217 0.73 -0.9 257,927 + DVU0217 0.76 -0.8 258,082 + +1.3 258,221 + DVU0218 0.16 +0.1 258,274 + DVU0218 0.21 -0.6 258,282 - DVU0218 0.22 -0.9 258,282 - DVU0218 0.22 +0.2 258,282 - DVU0218 0.22 +0.2
Or see this region's nucleotide sequence