Experiment: Lactate-Sulfate (60-30 mM) minimal (MoLS4)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0051 and DVUA0052 are separated by 181 nucleotides DVUA0052 and DVUA0053 are separated by 250 nucleotides DVUA0053 and DVUA0054 overlap by 4 nucleotides
DVUA0051: DVUA0051 - glycosyl transferase, group 1 family protein (TIGR), at 62,499 to 63,887
DVUA0051
DVUA0052: DVUA0052 - conserved hypothetical protein (TIGR), at 64,069 to 64,737
DVUA0052
DVUA0053: DVUA0053 - conserved hypothetical protein (TIGR), at 64,988 to 65,575
DVUA0053
DVUA0054: DVUA0054 - glycosyl transferase, group 1 family protein (TIGR), at 65,572 to 66,972
DVUA0054
Position (kb) 64
65 Strain fitness (log2 ratio) -1
0
1
2 at 63.079 kb on + strand, within DVUA0051 at 63.079 kb on + strand, within DVUA0051 at 63.270 kb on + strand, within DVUA0051 at 63.323 kb on - strand, within DVUA0051 at 63.335 kb on - strand, within DVUA0051 at 63.335 kb on - strand, within DVUA0051 at 63.468 kb on + strand, within DVUA0051 at 63.469 kb on + strand, within DVUA0051 at 63.524 kb on + strand, within DVUA0051 at 63.524 kb on + strand, within DVUA0051 at 63.524 kb on + strand, within DVUA0051 at 63.592 kb on + strand, within DVUA0051 at 63.829 kb on + strand at 63.829 kb on + strand at 63.876 kb on + strand at 63.891 kb on - strand at 63.931 kb on + strand at 63.941 kb on - strand at 63.955 kb on + strand at 64.031 kb on - strand at 64.208 kb on + strand, within DVUA0052 at 64.208 kb on + strand, within DVUA0052 at 64.208 kb on + strand, within DVUA0052 at 64.208 kb on + strand, within DVUA0052 at 64.216 kb on - strand, within DVUA0052 at 64.216 kb on - strand, within DVUA0052 at 64.236 kb on + strand, within DVUA0052 at 64.236 kb on + strand, within DVUA0052 at 64.282 kb on + strand, within DVUA0052 at 64.333 kb on + strand, within DVUA0052 at 64.361 kb on - strand, within DVUA0052 at 64.364 kb on - strand, within DVUA0052 at 64.413 kb on + strand, within DVUA0052 at 64.445 kb on + strand, within DVUA0052 at 64.445 kb on + strand, within DVUA0052 at 64.458 kb on - strand, within DVUA0052 at 64.518 kb on + strand, within DVUA0052 at 64.650 kb on + strand, within DVUA0052 at 64.701 kb on + strand at 64.701 kb on + strand at 64.709 kb on - strand at 64.714 kb on + strand at 64.717 kb on - strand at 64.724 kb on + strand at 64.732 kb on + strand at 64.732 kb on + strand at 64.740 kb on - strand at 64.768 kb on - strand at 64.779 kb on - strand at 64.779 kb on - strand at 64.781 kb on + strand at 64.835 kb on + strand at 65.030 kb on + strand at 65.035 kb on + strand at 65.038 kb on - strand at 65.043 kb on - strand at 65.121 kb on + strand, within DVUA0053 at 65.138 kb on + strand, within DVUA0053 at 65.153 kb on + strand, within DVUA0053 at 65.161 kb on - strand, within DVUA0053 at 65.259 kb on - strand, within DVUA0053 at 65.264 kb on - strand, within DVUA0053 at 65.327 kb on + strand, within DVUA0053 at 65.444 kb on + strand, within DVUA0053 at 65.452 kb on - strand, within DVUA0053 at 65.516 kb on + strand, within DVUA0053 at 65.597 kb on + strand at 65.605 kb on - strand at 65.611 kb on - strand at 65.637 kb on + strand at 65.649 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lactate-Sulfate (60-30 mM) minimal (MoLS4) remove 63,079 + DVUA0051 0.42 -0.3 63,079 + DVUA0051 0.42 -0.6 63,270 + DVUA0051 0.56 -0.2 63,323 - DVUA0051 0.59 +0.2 63,335 - DVUA0051 0.60 -0.5 63,335 - DVUA0051 0.60 -0.2 63,468 + DVUA0051 0.70 -0.3 63,469 + DVUA0051 0.70 -0.1 63,524 + DVUA0051 0.74 +0.2 63,524 + DVUA0051 0.74 -1.6 63,524 + DVUA0051 0.74 -1.5 63,592 + DVUA0051 0.79 +0.0 63,829 + +0.2 63,829 + -0.0 63,876 + +1.9 63,891 - -0.0 63,931 + -1.1 63,941 - -0.2 63,955 + -0.3 64,031 - -0.3 64,208 + DVUA0052 0.21 +0.3 64,208 + DVUA0052 0.21 +0.3 64,208 + DVUA0052 0.21 +1.2 64,208 + DVUA0052 0.21 -0.2 64,216 - DVUA0052 0.22 -0.3 64,216 - DVUA0052 0.22 +0.4 64,236 + DVUA0052 0.25 +0.0 64,236 + DVUA0052 0.25 +0.0 64,282 + DVUA0052 0.32 -0.4 64,333 + DVUA0052 0.39 +0.5 64,361 - DVUA0052 0.44 +1.0 64,364 - DVUA0052 0.44 -0.3 64,413 + DVUA0052 0.51 +0.0 64,445 + DVUA0052 0.56 +0.2 64,445 + DVUA0052 0.56 -0.5 64,458 - DVUA0052 0.58 +0.2 64,518 + DVUA0052 0.67 +0.9 64,650 + DVUA0052 0.87 -0.1 64,701 + -0.8 64,701 + -0.2 64,709 - +0.1 64,714 + -1.4 64,717 - -0.2 64,724 + +0.7 64,732 + +0.2 64,732 + -0.0 64,740 - -0.3 64,768 - +1.3 64,779 - -1.2 64,779 - -0.3 64,781 + -1.0 64,835 + +1.0 65,030 + -0.2 65,035 + +0.0 65,038 - +0.2 65,043 - +0.6 65,121 + DVUA0053 0.23 +0.2 65,138 + DVUA0053 0.26 +0.2 65,153 + DVUA0053 0.28 -0.0 65,161 - DVUA0053 0.29 +0.3 65,259 - DVUA0053 0.46 -1.0 65,264 - DVUA0053 0.47 +0.2 65,327 + DVUA0053 0.58 -0.0 65,444 + DVUA0053 0.78 +0.1 65,452 - DVUA0053 0.79 +0.2 65,516 + DVUA0053 0.90 +0.1 65,597 + -0.2 65,605 - +0.4 65,611 - -0.5 65,637 + -0.3 65,649 - -0.3
Or see this region's nucleotide sequence