Experiment: Lactate-Sulfate (60-30 mM) minimal (MoLS4)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0132 and DVU0133 are separated by 1 nucleotides DVU0133 and DVU0134 are separated by 360 nucleotides
DVU0132: DVU0132 - membrane protein, putative (TIGR), at 168,235 to 169,359
DVU0132
DVU0133: DVU0133 - hypothetical protein (TIGR), at 169,361 to 170,083
DVU0133
DVU0134: DVU0134 - glycosyl transferase, group 2 family protein (TIGR), at 170,444 to 171,481
DVU0134
Position (kb) 169
170
171 Strain fitness (log2 ratio) -2
-1
0
1 at 168.380 kb on + strand, within DVU0132 at 168.403 kb on + strand, within DVU0132 at 168.432 kb on + strand, within DVU0132 at 168.432 kb on + strand, within DVU0132 at 168.440 kb on - strand, within DVU0132 at 168.494 kb on + strand, within DVU0132 at 168.581 kb on - strand, within DVU0132 at 168.603 kb on + strand, within DVU0132 at 168.699 kb on - strand, within DVU0132 at 168.787 kb on - strand, within DVU0132 at 168.924 kb on + strand, within DVU0132 at 168.941 kb on + strand, within DVU0132 at 168.949 kb on - strand, within DVU0132 at 169.038 kb on - strand, within DVU0132 at 169.056 kb on + strand, within DVU0132 at 169.056 kb on + strand, within DVU0132 at 169.064 kb on - strand, within DVU0132 at 169.109 kb on + strand, within DVU0132 at 169.127 kb on - strand, within DVU0132 at 169.127 kb on - strand, within DVU0132 at 169.228 kb on - strand, within DVU0132 at 169.328 kb on - strand at 169.341 kb on + strand at 169.353 kb on + strand at 169.353 kb on + strand at 169.353 kb on + strand at 169.361 kb on - strand at 169.361 kb on - strand at 169.399 kb on + strand at 169.478 kb on + strand, within DVU0133 at 169.483 kb on + strand, within DVU0133 at 169.547 kb on - strand, within DVU0133 at 169.684 kb on + strand, within DVU0133 at 169.684 kb on + strand, within DVU0133 at 169.684 kb on + strand, within DVU0133 at 169.711 kb on - strand, within DVU0133 at 169.714 kb on - strand, within DVU0133 at 169.817 kb on + strand, within DVU0133 at 169.831 kb on + strand, within DVU0133 at 169.831 kb on + strand, within DVU0133 at 169.831 kb on + strand, within DVU0133 at 169.832 kb on + strand, within DVU0133 at 169.839 kb on - strand, within DVU0133 at 169.851 kb on - strand, within DVU0133 at 169.857 kb on - strand, within DVU0133 at 169.998 kb on - strand, within DVU0133 at 170.019 kb on + strand at 170.059 kb on + strand at 170.067 kb on - strand at 170.067 kb on - strand at 170.078 kb on + strand at 170.078 kb on + strand at 170.078 kb on + strand at 170.086 kb on - strand at 170.086 kb on - strand at 170.086 kb on - strand at 170.167 kb on + strand at 170.211 kb on + strand at 170.234 kb on - strand at 170.330 kb on - strand at 170.354 kb on + strand at 170.362 kb on - strand at 170.363 kb on - strand at 170.382 kb on + strand at 170.382 kb on + strand at 170.472 kb on + strand at 170.479 kb on + strand at 170.487 kb on - strand at 170.515 kb on - strand at 170.613 kb on + strand, within DVU0134 at 170.685 kb on + strand, within DVU0134 at 170.698 kb on - strand, within DVU0134 at 170.766 kb on + strand, within DVU0134 at 170.773 kb on + strand, within DVU0134 at 170.843 kb on - strand, within DVU0134 at 170.881 kb on + strand, within DVU0134 at 170.881 kb on + strand, within DVU0134 at 170.894 kb on - strand, within DVU0134 at 170.961 kb on + strand, within DVU0134 at 170.973 kb on + strand, within DVU0134 at 170.987 kb on - strand, within DVU0134 at 170.989 kb on - strand, within DVU0134 at 171.022 kb on + strand, within DVU0134 at 171.030 kb on - strand, within DVU0134 at 171.074 kb on + strand, within DVU0134
Per-strain Table
Position Strand Gene LocusTag Fraction Lactate-Sulfate (60-30 mM) minimal (MoLS4) remove 168,380 + DVU0132 0.13 -0.9 168,403 + DVU0132 0.15 -0.3 168,432 + DVU0132 0.18 -0.3 168,432 + DVU0132 0.18 -1.0 168,440 - DVU0132 0.18 -0.5 168,494 + DVU0132 0.23 -0.5 168,581 - DVU0132 0.31 -1.6 168,603 + DVU0132 0.33 -0.7 168,699 - DVU0132 0.41 -0.4 168,787 - DVU0132 0.49 -0.3 168,924 + DVU0132 0.61 -1.0 168,941 + DVU0132 0.63 +0.1 168,949 - DVU0132 0.63 -1.1 169,038 - DVU0132 0.71 -1.8 169,056 + DVU0132 0.73 -1.1 169,056 + DVU0132 0.73 -0.3 169,064 - DVU0132 0.74 +0.6 169,109 + DVU0132 0.78 -0.3 169,127 - DVU0132 0.79 -1.5 169,127 - DVU0132 0.79 -0.3 169,228 - DVU0132 0.88 -0.3 169,328 - +0.0 169,341 + +0.6 169,353 + -0.6 169,353 + -0.8 169,353 + -0.2 169,361 - -0.4 169,361 - -0.9 169,399 + -0.7 169,478 + DVU0133 0.16 -1.2 169,483 + DVU0133 0.17 -0.5 169,547 - DVU0133 0.26 -0.1 169,684 + DVU0133 0.45 -0.2 169,684 + DVU0133 0.45 -2.1 169,684 + DVU0133 0.45 -0.3 169,711 - DVU0133 0.48 -1.7 169,714 - DVU0133 0.49 -2.3 169,817 + DVU0133 0.63 -0.8 169,831 + DVU0133 0.65 -0.4 169,831 + DVU0133 0.65 -0.8 169,831 + DVU0133 0.65 -1.0 169,832 + DVU0133 0.65 -0.1 169,839 - DVU0133 0.66 -1.5 169,851 - DVU0133 0.68 +0.3 169,857 - DVU0133 0.69 -0.4 169,998 - DVU0133 0.88 -0.4 170,019 + -0.6 170,059 + -1.2 170,067 - -1.4 170,067 - -0.6 170,078 + -0.3 170,078 + +0.2 170,078 + -0.4 170,086 - +1.2 170,086 - -0.6 170,086 - -0.4 170,167 + +0.3 170,211 + -0.3 170,234 - -0.4 170,330 - +1.0 170,354 + -0.0 170,362 - -0.6 170,363 - +0.6 170,382 + -0.4 170,382 + +0.3 170,472 + -0.1 170,479 + -0.2 170,487 - +0.5 170,515 - +0.0 170,613 + DVU0134 0.16 -0.8 170,685 + DVU0134 0.23 -1.2 170,698 - DVU0134 0.24 -0.1 170,766 + DVU0134 0.31 -0.7 170,773 + DVU0134 0.32 +0.0 170,843 - DVU0134 0.38 +1.0 170,881 + DVU0134 0.42 +0.2 170,881 + DVU0134 0.42 +0.3 170,894 - DVU0134 0.43 -0.1 170,961 + DVU0134 0.50 +0.2 170,973 + DVU0134 0.51 -0.3 170,987 - DVU0134 0.52 +0.7 170,989 - DVU0134 0.53 -0.7 171,022 + DVU0134 0.56 +0.2 171,030 - DVU0134 0.56 -0.0 171,074 + DVU0134 0.61 -0.1
Or see this region's nucleotide sequence