Experiment: Lactate-Sulfate (60-30 mM) minimal (MoLS4)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2800 and DVU2801 are separated by 251 nucleotides DVU2801 and DVU2802 are separated by 247 nucleotides
DVU2800: DVU2800 - heavy metal translocating P-type ATPase (TIGR), at 2,901,273 to 2,903,174
DVU2800
DVU2801: DVU2801 - hypothetical protein (TIGR), at 2,903,426 to 2,904,691
DVU2801
DVU2802: DVU2802 - transcriptional regulator, GntR family (TIGR), at 2,904,939 to 2,905,634
DVU2802
Position (kb)
2903
2904
2905 Strain fitness (log2 ratio)
-1
0
1 at 2902.444 kb on + strand, within DVU2800 at 2902.444 kb on - strand, within DVU2800 at 2902.446 kb on + strand, within DVU2800 at 2902.465 kb on + strand, within DVU2800 at 2902.473 kb on + strand, within DVU2800 at 2902.520 kb on - strand, within DVU2800 at 2902.525 kb on - strand, within DVU2800 at 2902.616 kb on + strand, within DVU2800 at 2902.660 kb on - strand, within DVU2800 at 2902.706 kb on + strand, within DVU2800 at 2902.756 kb on - strand, within DVU2800 at 2902.762 kb on - strand, within DVU2800 at 2902.782 kb on + strand, within DVU2800 at 2902.782 kb on + strand, within DVU2800 at 2902.900 kb on + strand, within DVU2800 at 2903.022 kb on + strand at 2903.030 kb on - strand at 2903.146 kb on + strand at 2903.321 kb on + strand at 2903.337 kb on + strand at 2903.368 kb on - strand at 2903.379 kb on + strand at 2903.600 kb on + strand, within DVU2801 at 2903.652 kb on + strand, within DVU2801 at 2903.823 kb on - strand, within DVU2801 at 2903.990 kb on + strand, within DVU2801 at 2904.046 kb on - strand, within DVU2801 at 2904.051 kb on - strand, within DVU2801 at 2904.103 kb on - strand, within DVU2801 at 2904.167 kb on + strand, within DVU2801 at 2904.241 kb on - strand, within DVU2801 at 2904.241 kb on - strand, within DVU2801 at 2904.291 kb on + strand, within DVU2801 at 2904.333 kb on - strand, within DVU2801 at 2904.333 kb on - strand, within DVU2801 at 2904.401 kb on - strand, within DVU2801 at 2904.444 kb on + strand, within DVU2801 at 2904.444 kb on + strand, within DVU2801 at 2904.508 kb on - strand, within DVU2801 at 2904.537 kb on - strand, within DVU2801 at 2904.560 kb on + strand, within DVU2801 at 2904.583 kb on - strand at 2904.616 kb on - strand at 2904.620 kb on + strand at 2904.872 kb on - strand at 2905.006 kb on + strand at 2905.014 kb on - strand, within DVU2802 at 2905.061 kb on + strand, within DVU2802 at 2905.140 kb on - strand, within DVU2802 at 2905.140 kb on - strand, within DVU2802 at 2905.142 kb on + strand, within DVU2802 at 2905.173 kb on + strand, within DVU2802 at 2905.181 kb on - strand, within DVU2802 at 2905.212 kb on + strand, within DVU2802 at 2905.212 kb on + strand, within DVU2802 at 2905.227 kb on - strand, within DVU2802 at 2905.229 kb on + strand, within DVU2802 at 2905.338 kb on - strand, within DVU2802 at 2905.368 kb on + strand, within DVU2802 at 2905.397 kb on + strand, within DVU2802 at 2905.410 kb on - strand, within DVU2802 at 2905.476 kb on + strand, within DVU2802 at 2905.484 kb on - strand, within DVU2802 at 2905.508 kb on + strand, within DVU2802 at 2905.508 kb on + strand, within DVU2802 at 2905.509 kb on + strand, within DVU2802 at 2905.691 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lactate-Sulfate (60-30 mM) minimal (MoLS4) remove 2,902,444 + DVU2800 0.62 +0.1 2,902,444 - DVU2800 0.62 -0.5 2,902,446 + DVU2800 0.62 -0.3 2,902,465 + DVU2800 0.63 -0.4 2,902,473 + DVU2800 0.63 +0.0 2,902,520 - DVU2800 0.66 +0.1 2,902,525 - DVU2800 0.66 +0.7 2,902,616 + DVU2800 0.71 -0.1 2,902,660 - DVU2800 0.73 +0.3 2,902,706 + DVU2800 0.75 -0.2 2,902,756 - DVU2800 0.78 -0.6 2,902,762 - DVU2800 0.78 -0.0 2,902,782 + DVU2800 0.79 +0.2 2,902,782 + DVU2800 0.79 -0.3 2,902,900 + DVU2800 0.86 -0.3 2,903,022 + +0.6 2,903,030 - -0.2 2,903,146 + -0.6 2,903,321 + -0.7 2,903,337 + -0.1 2,903,368 - +0.0 2,903,379 + -0.9 2,903,600 + DVU2801 0.14 -0.0 2,903,652 + DVU2801 0.18 -0.6 2,903,823 - DVU2801 0.31 +1.1 2,903,990 + DVU2801 0.45 -0.6 2,904,046 - DVU2801 0.49 -0.8 2,904,051 - DVU2801 0.49 -0.7 2,904,103 - DVU2801 0.53 +0.8 2,904,167 + DVU2801 0.59 -0.9 2,904,241 - DVU2801 0.64 -0.7 2,904,241 - DVU2801 0.64 -0.8 2,904,291 + DVU2801 0.68 -0.8 2,904,333 - DVU2801 0.72 -1.2 2,904,333 - DVU2801 0.72 +0.1 2,904,401 - DVU2801 0.77 -0.7 2,904,444 + DVU2801 0.80 -1.4 2,904,444 + DVU2801 0.80 -0.9 2,904,508 - DVU2801 0.85 -0.7 2,904,537 - DVU2801 0.88 -0.6 2,904,560 + DVU2801 0.90 -1.0 2,904,583 - -0.2 2,904,616 - +0.2 2,904,620 + +0.2 2,904,872 - +0.2 2,905,006 + +1.5 2,905,014 - DVU2802 0.11 -1.0 2,905,061 + DVU2802 0.18 +0.3 2,905,140 - DVU2802 0.29 -0.4 2,905,140 - DVU2802 0.29 -0.7 2,905,142 + DVU2802 0.29 +0.0 2,905,173 + DVU2802 0.34 +0.1 2,905,181 - DVU2802 0.35 -0.0 2,905,212 + DVU2802 0.39 -0.2 2,905,212 + DVU2802 0.39 -0.2 2,905,227 - DVU2802 0.41 -0.0 2,905,229 + DVU2802 0.42 +0.2 2,905,338 - DVU2802 0.57 +0.1 2,905,368 + DVU2802 0.62 -0.1 2,905,397 + DVU2802 0.66 +1.4 2,905,410 - DVU2802 0.68 -1.4 2,905,476 + DVU2802 0.77 +0.4 2,905,484 - DVU2802 0.78 -0.0 2,905,508 + DVU2802 0.82 -0.8 2,905,508 + DVU2802 0.82 +0.1 2,905,509 + DVU2802 0.82 +0.4 2,905,691 - -0.5
Or see this region's nucleotide sequence