Experiment: Lactate-Sulfate (60-30 mM) minimal (MoLS4)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0680 and DVU0681 overlap by 139 nucleotides DVU0681 and DVU0682 are separated by 219 nucleotides
DVU0680: DVU0680 - sensory box histidine kinase (TIGR), at 752,095 to 754,167
DVU0680
DVU0681: DVU0681 - sensor histidine kinase/response regulator (TIGR), at 754,029 to 756,032
DVU0681
DVU0682: DVU0682 - DNA-binding protein, putative (TIGR), at 756,252 to 756,950
DVU0682
Position (kb) 754
755
756
757 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 753.033 kb on - strand, within DVU0680 at 753.048 kb on + strand, within DVU0680 at 753.092 kb on - strand, within DVU0680 at 753.119 kb on + strand, within DVU0680 at 753.128 kb on + strand, within DVU0680 at 753.140 kb on + strand, within DVU0680 at 753.141 kb on - strand, within DVU0680 at 753.221 kb on + strand, within DVU0680 at 753.221 kb on + strand, within DVU0680 at 753.227 kb on - strand, within DVU0680 at 753.239 kb on - strand, within DVU0680 at 753.271 kb on + strand, within DVU0680 at 753.292 kb on + strand, within DVU0680 at 753.364 kb on + strand, within DVU0680 at 753.373 kb on - strand, within DVU0680 at 753.435 kb on - strand, within DVU0680 at 753.512 kb on - strand, within DVU0680 at 753.512 kb on - strand, within DVU0680 at 753.600 kb on - strand, within DVU0680 at 753.925 kb on - strand, within DVU0680 at 754.030 kb on - strand at 754.141 kb on - strand at 754.164 kb on + strand at 754.164 kb on + strand at 754.172 kb on - strand at 754.299 kb on + strand, within DVU0681 at 754.335 kb on - strand, within DVU0681 at 754.355 kb on - strand, within DVU0681 at 754.463 kb on - strand, within DVU0681 at 754.636 kb on + strand, within DVU0681 at 754.636 kb on + strand, within DVU0681 at 754.754 kb on + strand, within DVU0681 at 754.910 kb on + strand, within DVU0681 at 755.016 kb on + strand, within DVU0681 at 755.024 kb on - strand, within DVU0681 at 755.164 kb on + strand, within DVU0681 at 755.484 kb on - strand, within DVU0681 at 755.692 kb on + strand, within DVU0681 at 756.159 kb on + strand at 756.269 kb on + strand at 756.313 kb on + strand at 756.331 kb on - strand, within DVU0682 at 756.411 kb on - strand, within DVU0682 at 756.520 kb on + strand, within DVU0682 at 756.621 kb on - strand, within DVU0682 at 756.621 kb on - strand, within DVU0682 at 756.645 kb on + strand, within DVU0682 at 756.724 kb on - strand, within DVU0682 at 756.724 kb on - strand, within DVU0682 at 756.724 kb on - strand, within DVU0682 at 756.746 kb on - strand, within DVU0682 at 756.750 kb on + strand, within DVU0682 at 756.826 kb on + strand, within DVU0682 at 756.828 kb on - strand, within DVU0682 at 756.893 kb on + strand at 756.903 kb on - strand at 756.991 kb on - strand at 756.991 kb on - strand at 757.009 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lactate-Sulfate (60-30 mM) minimal (MoLS4) remove 753,033 - DVU0680 0.45 -0.1 753,048 + DVU0680 0.46 +0.0 753,092 - DVU0680 0.48 -0.0 753,119 + DVU0680 0.49 +0.2 753,128 + DVU0680 0.50 +0.5 753,140 + DVU0680 0.50 -0.3 753,141 - DVU0680 0.50 -0.2 753,221 + DVU0680 0.54 +0.0 753,221 + DVU0680 0.54 -0.1 753,227 - DVU0680 0.55 +0.2 753,239 - DVU0680 0.55 +0.3 753,271 + DVU0680 0.57 +0.1 753,292 + DVU0680 0.58 -1.3 753,364 + DVU0680 0.61 -0.2 753,373 - DVU0680 0.62 +0.2 753,435 - DVU0680 0.65 -0.1 753,512 - DVU0680 0.68 +0.3 753,512 - DVU0680 0.68 -0.5 753,600 - DVU0680 0.73 -0.7 753,925 - DVU0680 0.88 +0.8 754,030 - -1.5 754,141 - -0.6 754,164 + -0.2 754,164 + +0.4 754,172 - -0.0 754,299 + DVU0681 0.13 -0.1 754,335 - DVU0681 0.15 +0.5 754,355 - DVU0681 0.16 -0.8 754,463 - DVU0681 0.22 +0.2 754,636 + DVU0681 0.30 -1.5 754,636 + DVU0681 0.30 -0.7 754,754 + DVU0681 0.36 +0.5 754,910 + DVU0681 0.44 -1.0 755,016 + DVU0681 0.49 +0.2 755,024 - DVU0681 0.50 +0.1 755,164 + DVU0681 0.57 +0.2 755,484 - DVU0681 0.73 -0.1 755,692 + DVU0681 0.83 +1.5 756,159 + +0.5 756,269 + -3.2 756,313 + +0.3 756,331 - DVU0682 0.11 +0.7 756,411 - DVU0682 0.23 +0.1 756,520 + DVU0682 0.38 -0.4 756,621 - DVU0682 0.53 -0.3 756,621 - DVU0682 0.53 -0.7 756,645 + DVU0682 0.56 -2.6 756,724 - DVU0682 0.68 -1.7 756,724 - DVU0682 0.68 -0.5 756,724 - DVU0682 0.68 -0.5 756,746 - DVU0682 0.71 -0.1 756,750 + DVU0682 0.71 -0.4 756,826 + DVU0682 0.82 -1.1 756,828 - DVU0682 0.82 -0.7 756,893 + +0.5 756,903 - -0.9 756,991 - +0.2 756,991 - -0.6 757,009 - -1.4
Or see this region's nucleotide sequence