Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS11395

Experiment: Aerobic; Cadmium acetate 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aerobic; Cadmium acetate 1
2,413,532	-				-1.4
2,413,532	-				-0.6
2,413,568	+				-2.8
2,413,568	+				-2.2
2,413,568	+				-2.1
2,413,569	-				-1.9
2,413,569	-				-1.7
2,413,569	-				-1.2
2,413,569	-				-2.1
2,413,594	+				+0.0
2,413,737	+		ABCV34_RS11390	0.18	-0.6
2,413,737	+		ABCV34_RS11390	0.18	-3.2
2,413,737	+		ABCV34_RS11390	0.18	+0.0
2,413,860	-		ABCV34_RS11390	0.34	-1.5
2,413,884	+		ABCV34_RS11390	0.37	-2.3
2,413,884	+		ABCV34_RS11390	0.37	-2.2
2,413,884	+		ABCV34_RS11390	0.37	-1.3
2,413,885	-		ABCV34_RS11390	0.38	-2.7
2,413,885	-		ABCV34_RS11390	0.38	-1.6
2,414,356	+				-0.9
2,414,356	+				-1.3
2,414,356	+				-0.9
2,414,357	-				-1.9
2,414,357	-				-2.2
2,414,357	-				-1.1
2,414,357	-				-1.6
2,414,357	-				-1.1
2,414,357	-				-1.8
2,414,357	-				-1.9
2,414,516	+				-2.7
2,414,516	+				-0.9
2,414,516	+				-2.1
2,414,516	+				-1.2
2,414,517	-				-1.6
2,414,517	-				-1.7
2,414,642	-				-2.2
2,414,683	+		ABCV34_RS11395	0.12	-1.2
2,414,683	+		ABCV34_RS11395	0.12	-2.2
2,414,683	+		ABCV34_RS11395	0.12	-2.1
2,414,683	+		ABCV34_RS11395	0.12	-0.8
2,414,683	+		ABCV34_RS11395	0.12	-1.2
2,414,684	-		ABCV34_RS11395	0.12	-1.3
2,414,684	-		ABCV34_RS11395	0.12	-2.0
2,414,684	-		ABCV34_RS11395	0.12	-0.7
2,414,684	-		ABCV34_RS11395	0.12	-1.3
2,414,684	-		ABCV34_RS11395	0.12	-1.9
2,414,684	-		ABCV34_RS11395	0.12	-1.2
2,414,684	-		ABCV34_RS11395	0.12	-1.7
2,414,684	-		ABCV34_RS11395	0.12	-1.7
2,414,686	+		ABCV34_RS11395	0.13	-2.2
2,414,686	+		ABCV34_RS11395	0.13	-1.8
2,414,686	+		ABCV34_RS11395	0.13	-1.0
2,414,686	+		ABCV34_RS11395	0.13	-2.0
2,414,686	+		ABCV34_RS11395	0.13	-1.0
2,414,686	+		ABCV34_RS11395	0.13	-1.6
2,414,686	+		ABCV34_RS11395	0.13	-1.5
2,414,686	+		ABCV34_RS11395	0.13	-1.7
2,414,686	+		ABCV34_RS11395	0.13	-1.8
2,414,686	+		ABCV34_RS11395	0.13	-2.0
2,414,687	-		ABCV34_RS11395	0.13	-2.2
2,414,687	-		ABCV34_RS11395	0.13	-0.8
2,414,687	-		ABCV34_RS11395	0.13	-1.8
2,414,687	-		ABCV34_RS11395	0.13	-2.0
2,414,687	-		ABCV34_RS11395	0.13	-1.3
2,414,687	-		ABCV34_RS11395	0.13	-1.2
2,414,687	-		ABCV34_RS11395	0.13	-1.6
2,414,857	+		ABCV34_RS11395	0.25	-2.6
2,414,857	+		ABCV34_RS11395	0.25	-2.3
2,414,857	+		ABCV34_RS11395	0.25	-2.5
2,414,857	+		ABCV34_RS11395	0.25	-2.4
2,414,857	+		ABCV34_RS11395	0.25	-1.7
2,414,857	+		ABCV34_RS11395	0.25	-1.4
2,414,932	+		ABCV34_RS11395	0.31	-2.7
2,414,933	-		ABCV34_RS11395	0.31	-2.6
2,414,933	-		ABCV34_RS11395	0.31	-1.5
2,415,119	+		ABCV34_RS11395	0.45	-1.7
2,415,128	-		ABCV34_RS11395	0.45	-0.8
2,415,128	-		ABCV34_RS11395	0.45	-1.7
2,415,128	-		ABCV34_RS11395	0.45	-2.3
2,415,130	+		ABCV34_RS11395	0.46	+1.0
2,415,130	+		ABCV34_RS11395	0.46	-1.9
2,415,130	+		ABCV34_RS11395	0.46	-1.9
2,415,130	+		ABCV34_RS11395	0.46	-2.0
2,415,131	-		ABCV34_RS11395	0.46	-1.1
2,415,131	-		ABCV34_RS11395	0.46	-1.5
2,415,204	+		ABCV34_RS11395	0.51	-1.6
2,415,213	+		ABCV34_RS11395	0.52	-1.5
2,415,213	+		ABCV34_RS11395	0.52	-2.0
2,415,213	+		ABCV34_RS11395	0.52	-1.6
2,415,214	-		ABCV34_RS11395	0.52	-2.1
2,415,251	+		ABCV34_RS11395	0.55	-1.5
2,415,251	+		ABCV34_RS11395	0.55	-0.3
2,415,251	+		ABCV34_RS11395	0.55	-1.6
2,415,251	+		ABCV34_RS11395	0.55	-1.2
2,415,251	+		ABCV34_RS11395	0.55	-2.1
2,415,251	+		ABCV34_RS11395	0.55	-2.6
2,415,251	+		ABCV34_RS11395	0.55	-1.8
2,415,251	+		ABCV34_RS11395	0.55	-2.4
2,415,251	+		ABCV34_RS11395	0.55	-1.2
2,415,252	-		ABCV34_RS11395	0.55	-1.7
2,415,252	-		ABCV34_RS11395	0.55	-1.7
2,415,252	-		ABCV34_RS11395	0.55	+0.0
2,415,252	-		ABCV34_RS11395	0.55	-1.8
2,415,252	-		ABCV34_RS11395	0.55	-1.2
2,415,252	-		ABCV34_RS11395	0.55	-1.0
2,415,252	-		ABCV34_RS11395	0.55	-1.8
2,415,252	-		ABCV34_RS11395	0.55	-2.1
2,415,252	-		ABCV34_RS11395	0.55	-1.4
2,415,252	-		ABCV34_RS11395	0.55	-2.0
2,415,349	+		ABCV34_RS11395	0.62	-1.1
2,415,349	+		ABCV34_RS11395	0.62	-0.9
2,415,349	+		ABCV34_RS11395	0.62	-1.4
2,415,350	-		ABCV34_RS11395	0.62	-1.4
2,415,350	-		ABCV34_RS11395	0.62	-1.8
2,415,350	-		ABCV34_RS11395	0.62	-0.9
2,415,352	+		ABCV34_RS11395	0.62	-1.9
2,415,352	+		ABCV34_RS11395	0.62	-1.8
2,415,393	+		ABCV34_RS11395	0.65	+0.2
2,415,393	+		ABCV34_RS11395	0.65	-0.6
2,415,394	-		ABCV34_RS11395	0.65	-2.1
2,415,401	+		ABCV34_RS11395	0.66	-2.5
2,415,401	+		ABCV34_RS11395	0.66	-0.9
2,415,401	+		ABCV34_RS11395	0.66	-1.2
2,415,401	+		ABCV34_RS11395	0.66	-2.1
2,415,401	+		ABCV34_RS11395	0.66	-1.7
2,415,401	+		ABCV34_RS11395	0.66	-2.1
2,415,401	+		ABCV34_RS11395	0.66	-0.7
2,415,401	+		ABCV34_RS11395	0.66	-1.0
2,415,401	+		ABCV34_RS11395	0.66	-2.7
2,415,401	+		ABCV34_RS11395	0.66	-2.1
2,415,401	+		ABCV34_RS11395	0.66	-0.6
2,415,401	+		ABCV34_RS11395	0.66	-1.2
2,415,401	+		ABCV34_RS11395	0.66	-1.5
2,415,402	-		ABCV34_RS11395	0.66	-1.4
2,415,402	-		ABCV34_RS11395	0.66	-1.4
2,415,402	-		ABCV34_RS11395	0.66	-1.5
2,415,402	-		ABCV34_RS11395	0.66	-2.2
2,415,402	-		ABCV34_RS11395	0.66	-1.4
2,415,405	+		ABCV34_RS11395	0.66	-1.7
2,415,405	+		ABCV34_RS11395	0.66	-2.2
2,415,405	+		ABCV34_RS11395	0.66	-2.0
2,415,406	-		ABCV34_RS11395	0.66	-2.3
2,415,406	-		ABCV34_RS11395	0.66	-1.5
2,415,406	-		ABCV34_RS11395	0.66	-1.4
2,415,406	-		ABCV34_RS11395	0.66	-1.2
2,415,406	-		ABCV34_RS11395	0.66	-0.8
2,415,406	-		ABCV34_RS11395	0.66	-2.1
2,415,406	-		ABCV34_RS11395	0.66	-0.8
2,415,568	+		ABCV34_RS11395	0.78	-1.2
2,415,568	+		ABCV34_RS11395	0.78	-1.4
2,415,569	-		ABCV34_RS11395	0.78	-1.4
2,415,569	-		ABCV34_RS11395	0.78	-2.0
2,415,569	-		ABCV34_RS11395	0.78	-0.6
2,415,574	+		ABCV34_RS11395	0.79	-1.9
2,415,574	+		ABCV34_RS11395	0.79	-1.5
2,415,574	+		ABCV34_RS11395	0.79	-1.4
2,415,574	+		ABCV34_RS11395	0.79	-2.2
2,415,574	+		ABCV34_RS11395	0.79	-1.4
2,415,574	+		ABCV34_RS11395	0.79	-2.0
2,415,575	-		ABCV34_RS11395	0.79	-1.7
2,415,640	+		ABCV34_RS11395	0.84	-1.6
2,415,640	+		ABCV34_RS11395	0.84	-1.2
2,415,640	+		ABCV34_RS11395	0.84	-3.0
2,415,640	+		ABCV34_RS11395	0.84	-1.6
2,415,640	+		ABCV34_RS11395	0.84	+0.6
2,415,641	-		ABCV34_RS11395	0.84	-1.6
2,415,641	-		ABCV34_RS11395	0.84	-1.4
2,415,641	-		ABCV34_RS11395	0.84	-1.6
2,415,641	-		ABCV34_RS11395	0.84	-2.2
2,415,641	-		ABCV34_RS11395	0.84	-1.3
2,415,641	-		ABCV34_RS11395	0.84	-1.7
2,415,641	-		ABCV34_RS11395	0.84	-1.4
2,415,697	+		ABCV34_RS11395	0.88	-1.8
2,415,697	+		ABCV34_RS11395	0.88	-1.2
2,415,697	+		ABCV34_RS11395	0.88	-1.1
2,415,697	+		ABCV34_RS11395	0.88	-1.3
2,415,697	+		ABCV34_RS11395	0.88	-0.4
2,415,698	-		ABCV34_RS11395	0.88	-1.1
2,415,698	-		ABCV34_RS11395	0.88	-2.4
2,415,698	-		ABCV34_RS11395	0.88	-1.8
2,415,793	-				-2.0
2,415,808	+				-1.4
2,415,808	+				-1.1
2,415,809	-				-1.8
2,415,809	-				-1.9
2,415,876	+				-1.6
2,415,876	+				-2.6
2,415,877	-				-1.6
2,415,877	-				-2.0
2,415,877	-				-1.8
2,415,943	+		ABCV34_RS11400	0.12	-1.1
2,415,943	+		ABCV34_RS11400	0.12	+0.0
2,415,944	-		ABCV34_RS11400	0.12	-2.1
2,415,944	-		ABCV34_RS11400	0.12	-1.6
2,416,279	+		ABCV34_RS11400	0.76	-1.9
2,416,280	-		ABCV34_RS11400	0.76	-1.4
2,416,315	+		ABCV34_RS11400	0.82	-0.4
2,416,316	-		ABCV34_RS11400	0.83	-1.2
2,416,339	+		ABCV34_RS11400	0.87	-3.4
2,416,339	+		ABCV34_RS11400	0.87	+1.0
2,416,339	+		ABCV34_RS11400	0.87	-0.9
2,416,340	-		ABCV34_RS11400	0.87	-1.5
2,416,340	-		ABCV34_RS11400	0.87	-2.5
2,416,340	-		ABCV34_RS11400	0.87	-1.0
2,416,340	-		ABCV34_RS11400	0.87	-1.6
2,416,340	-		ABCV34_RS11400	0.87	-1.5
2,416,340	-		ABCV34_RS11400	0.87	-2.0
2,416,340	-		ABCV34_RS11400	0.87	-1.2
2,416,340	-		ABCV34_RS11400	0.87	-1.3
2,416,360	+				-0.7
2,416,360	+				-1.8
2,416,413	+				-2.4
2,416,413	+				-1.4
2,416,413	+				-1.6
2,416,414	-				-2.0
2,416,414	-				-1.4
2,416,414	-				-1.8
2,416,414	-				-2.2
2,416,414	-				-1.5
2,416,414	-				-2.6
2,416,414	-				-1.5
2,416,414	-				-1.6
2,416,587	+		ABCV34_RS11405	0.31	-1.7
2,416,588	-		ABCV34_RS11405	0.31	-1.1
2,416,602	+		ABCV34_RS11405	0.33	-2.0
2,416,603	-		ABCV34_RS11405	0.33	-1.6
2,416,603	-		ABCV34_RS11405	0.33	-1.1
2,416,736	+		ABCV34_RS11405	0.56	-2.8
2,416,736	+		ABCV34_RS11405	0.56	-1.2
2,416,736	+		ABCV34_RS11405	0.56	-1.1
2,416,736	+		ABCV34_RS11405	0.56	-0.2
2,416,737	-		ABCV34_RS11405	0.56	-1.1
2,416,737	-		ABCV34_RS11405	0.56	-2.0
2,416,739	+		ABCV34_RS11405	0.56	-1.7
2,416,739	+		ABCV34_RS11405	0.56	-2.2
2,416,739	+		ABCV34_RS11405	0.56	-2.0
2,416,739	+		ABCV34_RS11405	0.56	-1.1
2,416,739	+		ABCV34_RS11405	0.56	-1.7
2,416,739	+		ABCV34_RS11405	0.56	-1.9
2,416,739	+		ABCV34_RS11405	0.56	-1.3
2,416,740	-		ABCV34_RS11405	0.56	-1.4
2,416,740	-		ABCV34_RS11405	0.56	-1.2
2,416,740	-		ABCV34_RS11405	0.56	-1.6
2,416,740	-		ABCV34_RS11405	0.56	-1.7
2,416,740	-		ABCV34_RS11405	0.56	-1.7
2,416,740	-		ABCV34_RS11405	0.56	-1.7
2,416,740	-		ABCV34_RS11405	0.56	-1.5