Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS05255

Experiment: Aerobic; copper (II) chloride 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aerobic; copper (II) chloride 1
1,146,061	+				-1.2
1,146,061	+				-1.4
1,146,118	+				-2.1
1,146,118	+				-2.0
1,146,119	-				-1.3
1,146,119	-				-1.9
1,146,119	-				-1.9
1,146,119	-				-2.0
1,146,131	+				-1.3
1,146,132	-				-0.5
1,146,132	-				-3.0
1,146,134	+				-1.5
1,146,135	-				-1.7
1,146,135	-				-1.3
1,146,135	-				+1.1
1,146,138	-				-1.8
1,146,152	+				-2.2
1,146,153	-				-1.0
1,146,153	-				-1.0
1,146,210	+				-1.9
1,146,342	+				-0.0
1,146,342	+				-2.0
1,146,342	+				-1.5
1,146,342	+				-0.8
1,146,343	-				-1.1
1,146,362	+				-1.8
1,146,374	-				-2.7
1,146,538	+		ABCV34_RS05255	0.11	-1.3
1,146,538	+		ABCV34_RS05255	0.11	-1.0
1,146,538	+		ABCV34_RS05255	0.11	-2.8
1,146,539	-		ABCV34_RS05255	0.11	-2.4
1,146,724	+		ABCV34_RS05255	0.27	-1.4
1,146,724	+		ABCV34_RS05255	0.27	-2.0
1,146,724	+		ABCV34_RS05255	0.27	-1.3
1,146,724	+		ABCV34_RS05255	0.27	-1.9
1,146,724	+		ABCV34_RS05255	0.27	-0.9
1,146,725	-		ABCV34_RS05255	0.27	-0.7
1,146,725	-		ABCV34_RS05255	0.27	-1.8
1,146,725	-		ABCV34_RS05255	0.27	-0.9
1,146,725	-		ABCV34_RS05255	0.27	-1.2
1,146,725	-		ABCV34_RS05255	0.27	-1.0
1,146,760	+		ABCV34_RS05255	0.30	-0.9
1,146,760	+		ABCV34_RS05255	0.30	+0.5
1,146,760	+		ABCV34_RS05255	0.30	-0.5
1,146,760	+		ABCV34_RS05255	0.30	-1.9
1,146,761	-		ABCV34_RS05255	0.30	-2.1
1,146,883	+		ABCV34_RS05255	0.41	-1.9
1,146,883	+		ABCV34_RS05255	0.41	-0.8
1,146,883	+		ABCV34_RS05255	0.41	-1.1
1,146,883	+		ABCV34_RS05255	0.41	-1.2
1,146,883	+		ABCV34_RS05255	0.41	-1.0
1,146,883	+		ABCV34_RS05255	0.41	-2.6
1,146,883	+		ABCV34_RS05255	0.41	-0.4
1,146,883	+		ABCV34_RS05255	0.41	-1.1
1,146,884	-		ABCV34_RS05255	0.41	-1.0
1,146,884	-		ABCV34_RS05255	0.41	-1.4
1,146,884	-		ABCV34_RS05255	0.41	-0.4
1,146,904	+		ABCV34_RS05255	0.43	-0.8
1,146,904	+		ABCV34_RS05255	0.43	-2.0
1,146,904	+		ABCV34_RS05255	0.43	-2.0
1,146,904	+		ABCV34_RS05255	0.43	-2.1
1,146,904	+		ABCV34_RS05255	0.43	-2.0
1,146,904	+		ABCV34_RS05255	0.43	-3.2
1,146,904	+		ABCV34_RS05255	0.43	-0.3
1,146,905	-		ABCV34_RS05255	0.43	-1.4
1,146,905	-		ABCV34_RS05255	0.43	-1.1
1,146,905	-		ABCV34_RS05255	0.43	-1.9
1,146,905	-		ABCV34_RS05255	0.43	-0.7
1,146,905	-		ABCV34_RS05255	0.43	-0.7
1,146,905	-		ABCV34_RS05255	0.43	+0.2
1,146,905	-		ABCV34_RS05255	0.43	-1.3
1,146,905	-		ABCV34_RS05255	0.43	-0.6
1,146,905	-		ABCV34_RS05255	0.43	-1.5
1,146,940	+		ABCV34_RS05255	0.46	-2.0
1,146,941	-		ABCV34_RS05255	0.46	-1.8
1,147,036	+		ABCV34_RS05255	0.54	-0.9
1,147,037	-		ABCV34_RS05255	0.54	-1.9
1,147,096	+		ABCV34_RS05255	0.60	-0.9
1,147,097	-		ABCV34_RS05255	0.60	-0.8
1,147,099	+		ABCV34_RS05255	0.60	+0.3
1,147,099	+		ABCV34_RS05255	0.60	-1.1
1,147,099	+		ABCV34_RS05255	0.60	-1.8
1,147,099	+		ABCV34_RS05255	0.60	-1.4
1,147,099	+		ABCV34_RS05255	0.60	-1.4
1,147,099	+		ABCV34_RS05255	0.60	-1.3
1,147,099	+		ABCV34_RS05255	0.60	-0.8
1,147,100	-		ABCV34_RS05255	0.60	-1.9
1,147,100	-		ABCV34_RS05255	0.60	-0.5
1,147,100	-		ABCV34_RS05255	0.60	-1.5
1,147,291	+		ABCV34_RS05255	0.77	-1.2
1,147,292	-		ABCV34_RS05255	0.77	-1.1
1,147,292	-		ABCV34_RS05255	0.77	-2.1
1,147,327	+		ABCV34_RS05255	0.80	-0.4
1,147,327	+		ABCV34_RS05255	0.80	-1.5
1,147,327	+		ABCV34_RS05255	0.80	-1.5
1,147,327	+		ABCV34_RS05255	0.80	-0.0
1,147,327	+		ABCV34_RS05255	0.80	-1.1
1,147,327	+		ABCV34_RS05255	0.80	-1.0
1,147,328	-		ABCV34_RS05255	0.80	-2.9
1,147,328	-		ABCV34_RS05255	0.80	-1.2
1,147,328	-		ABCV34_RS05255	0.80	-0.7
1,147,328	-		ABCV34_RS05255	0.80	-1.4
1,147,328	-		ABCV34_RS05255	0.80	-2.7
1,147,328	-		ABCV34_RS05255	0.80	-1.0
1,147,328	-		ABCV34_RS05255	0.80	-1.3
1,147,328	-		ABCV34_RS05255	0.80	-2.3
1,147,486	-				+0.4
1,147,543	+				-0.9
1,147,543	+				-1.8
1,147,544	-				-3.7
1,147,544	-				-3.1
1,147,558	+				-0.8
1,147,558	+				-0.9
1,147,558	+				-1.5
1,147,559	-				-1.5
1,147,559	-				-2.8
1,147,559	-				-1.4
1,147,607	+				-1.1
1,147,608	-				+0.1
1,147,608	-				-1.7
1,147,645	+				-1.9
1,147,645	+				-0.6
1,147,645	+				-1.9
1,147,645	+				-2.4
1,147,646	-				-1.3
1,147,646	-				-1.7
1,147,646	-				-2.8
1,147,717	+				-1.1
1,147,717	+				-2.1
1,147,760	+				-2.4
1,147,760	+				-2.9
1,147,760	+				-3.8
1,147,760	+				-2.1
1,147,760	+				-1.2
1,147,760	+				-1.8
1,147,760	+				-1.4
1,147,761	-				-1.1
1,147,761	-				+0.2
1,147,761	-				+0.4
1,147,761	-				-1.6
1,147,761	-				-2.2
1,147,761	-				-1.8
1,147,761	-				-1.6
1,147,761	-				-2.2
1,147,761	-				-2.3
1,147,761	-				-1.1
1,147,761	-				-1.0
1,147,761	-				-0.7
1,147,761	-				-0.0
1,147,761	-				-1.7
1,147,781	+				-0.4
1,147,782	-				-1.4
1,147,783	+				-0.2
1,147,783	+				-1.4
1,147,783	+				-1.2
1,147,783	+				+0.7
1,147,783	+				-0.9
1,147,783	+				-1.5
1,147,783	+				-1.6
1,147,784	-				-0.1
1,147,784	-				-1.0
1,147,784	-				-0.5
1,147,784	-				-1.7
1,147,784	-				-0.6
1,147,784	-				-2.2
1,147,784	-				-1.7
1,147,784	-				+0.2
1,147,793	+				-0.6
1,147,793	+				-1.5
1,147,979	+		ABCV34_RS05260	0.30	-2.3
1,147,980	-		ABCV34_RS05260	0.30	-1.3
1,147,980	-		ABCV34_RS05260	0.30	-1.1
1,147,980	-		ABCV34_RS05260	0.30	-1.6
1,147,980	-		ABCV34_RS05260	0.30	-1.3
1,147,980	-		ABCV34_RS05260	0.30	-1.9
1,147,980	-		ABCV34_RS05260	0.30	-2.5
1,148,138	+		ABCV34_RS05260	0.48	-1.3
1,148,138	+		ABCV34_RS05260	0.48	-1.0
1,148,138	+		ABCV34_RS05260	0.48	-2.3
1,148,138	+		ABCV34_RS05260	0.48	-1.4
1,148,198	+		ABCV34_RS05260	0.54	-1.2
1,148,198	+		ABCV34_RS05260	0.54	-2.2
1,148,199	-		ABCV34_RS05260	0.54	-1.4
1,148,199	-		ABCV34_RS05260	0.54	-2.5
1,148,199	-		ABCV34_RS05260	0.54	-3.7
1,148,199	-		ABCV34_RS05260	0.54	-2.6
1,148,199	-		ABCV34_RS05260	0.54	-1.3
1,148,360	+		ABCV34_RS05260	0.72	-1.4
1,148,360	+		ABCV34_RS05260	0.72	-1.2
1,148,360	+		ABCV34_RS05260	0.72	-1.5
1,148,360	+		ABCV34_RS05260	0.72	-1.4
1,148,360	+		ABCV34_RS05260	0.72	-1.8
1,148,361	-		ABCV34_RS05260	0.72	-1.9
1,148,361	-		ABCV34_RS05260	0.72	-1.4
1,148,361	-		ABCV34_RS05260	0.72	-1.5
1,148,361	-		ABCV34_RS05260	0.72	-1.4
1,148,375	+		ABCV34_RS05260	0.74	-2.8
1,148,375	+		ABCV34_RS05260	0.74	-1.0
1,148,375	+		ABCV34_RS05260	0.74	-1.8
1,148,375	+		ABCV34_RS05260	0.74	-1.4
1,148,376	-		ABCV34_RS05260	0.74	-0.5
1,148,376	-		ABCV34_RS05260	0.74	-2.5
1,148,397	-		ABCV34_RS05260	0.76	-1.6
1,148,504	+		ABCV34_RS05260	0.88	-0.2
1,148,504	+		ABCV34_RS05260	0.88	-0.8
1,148,504	+		ABCV34_RS05260	0.88	-1.5
1,148,504	+		ABCV34_RS05260	0.88	-2.5
1,148,504	+		ABCV34_RS05260	0.88	+0.2
1,148,504	+		ABCV34_RS05260	0.88	+0.2
1,148,504	+		ABCV34_RS05260	0.88	-0.2
1,148,504	+		ABCV34_RS05260	0.88	-0.7
1,148,504	+		ABCV34_RS05260	0.88	-1.0
1,148,504	+		ABCV34_RS05260	0.88	-1.9
1,148,504	+		ABCV34_RS05260	0.88	-0.5
1,148,504	+		ABCV34_RS05260	0.88	-1.0
1,148,505	-		ABCV34_RS05260	0.88	-0.6
1,148,505	-		ABCV34_RS05260	0.88	-2.1
1,148,505	-		ABCV34_RS05260	0.88	-1.4
1,148,505	-		ABCV34_RS05260	0.88	-1.9
1,148,505	-		ABCV34_RS05260	0.88	-1.9
1,148,505	-		ABCV34_RS05260	0.88	-1.3
1,148,505	-		ABCV34_RS05260	0.88	-2.1
1,148,505	-		ABCV34_RS05260	0.88	-1.3
1,148,505	-		ABCV34_RS05260	0.88	-2.2
1,148,505	-		ABCV34_RS05260	0.88	-1.2
1,148,505	-		ABCV34_RS05260	0.88	-2.1
1,148,505	-		ABCV34_RS05260	0.88	-1.3
1,148,505	-		ABCV34_RS05260	0.88	-1.8
1,148,505	-		ABCV34_RS05260	0.88	-1.4
1,148,505	-		ABCV34_RS05260	0.88	+0.4