Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS09155

Experiment: Aerobic; copper (II) chloride 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aerobic; copper (II) chloride 1
1,958,461	+		ABCV34_RS09150	0.43	-1.6
1,958,461	+		ABCV34_RS09150	0.43	-0.9
1,958,461	+		ABCV34_RS09150	0.43	-1.2
1,958,461	+		ABCV34_RS09150	0.43	-1.2
1,958,461	+		ABCV34_RS09150	0.43	-1.5
1,958,461	+		ABCV34_RS09150	0.43	-1.5
1,958,461	+		ABCV34_RS09150	0.43	-1.5
1,958,461	+		ABCV34_RS09150	0.43	-0.2
1,958,461	+		ABCV34_RS09150	0.43	-2.9
1,958,461	+		ABCV34_RS09150	0.43	-2.3
1,958,461	+		ABCV34_RS09150	0.43	-0.9
1,958,461	+		ABCV34_RS09150	0.43	-2.3
1,958,461	+		ABCV34_RS09150	0.43	-1.1
1,958,462	-		ABCV34_RS09150	0.43	-1.3
1,958,462	-		ABCV34_RS09150	0.43	-1.7
1,958,462	-		ABCV34_RS09150	0.43	-2.0
1,958,462	-		ABCV34_RS09150	0.43	-1.7
1,958,462	-		ABCV34_RS09150	0.43	-1.9
1,958,462	-		ABCV34_RS09150	0.43	-2.2
1,958,462	-		ABCV34_RS09150	0.43	-1.6
1,958,462	-		ABCV34_RS09150	0.43	-1.4
1,958,487	+		ABCV34_RS09150	0.45	-1.7
1,958,487	+		ABCV34_RS09150	0.45	-1.6
1,958,488	-		ABCV34_RS09150	0.45	-1.9
1,958,488	-		ABCV34_RS09150	0.45	-1.3
1,958,488	-		ABCV34_RS09150	0.45	-2.3
1,958,488	-		ABCV34_RS09150	0.45	-1.5
1,958,488	-		ABCV34_RS09150	0.45	-1.8
1,958,488	-		ABCV34_RS09150	0.45	-1.8
1,958,575	+		ABCV34_RS09150	0.53	-0.8
1,958,575	+		ABCV34_RS09150	0.53	-1.6
1,958,576	-		ABCV34_RS09150	0.53	-2.0
1,958,641	+		ABCV34_RS09150	0.59	-1.4
1,958,641	+		ABCV34_RS09150	0.59	-0.7
1,958,642	-		ABCV34_RS09150	0.59	-1.2
1,958,642	-		ABCV34_RS09150	0.59	-1.4
1,958,678	+		ABCV34_RS09150	0.62	-1.1
1,958,679	-		ABCV34_RS09150	0.62	-1.7
1,958,679	-		ABCV34_RS09150	0.62	-2.8
1,958,679	-		ABCV34_RS09150	0.62	-1.5
1,958,731	+		ABCV34_RS09150	0.67	-1.6
1,958,731	+		ABCV34_RS09150	0.67	-1.1
1,958,731	+		ABCV34_RS09150	0.67	-1.9
1,958,732	-		ABCV34_RS09150	0.67	-1.2
1,958,732	-		ABCV34_RS09150	0.67	-1.2
1,958,732	-		ABCV34_RS09150	0.67	-1.5
1,959,054	+				-2.2
1,959,054	+				-0.8
1,959,054	+				-2.4
1,959,054	+				-0.5
1,959,055	-				-2.1
1,959,055	-				-0.6
1,959,055	-				-2.0
1,959,055	-				-1.3
1,959,086	+				-1.4
1,959,086	+				-1.7
1,959,086	+				-2.4
1,959,158	-				-0.9
1,959,204	+				-2.0
1,959,205	-				-1.3
1,959,214	+				-1.4
1,959,214	+				-0.9
1,959,215	-				-0.5
1,959,218	-				+1.4
1,959,219	+				-0.8
1,959,219	+				-1.5
1,959,219	+				-1.2
1,959,219	+				-1.1
1,959,220	-				-1.0
1,959,223	+				-1.8
1,959,223	+				-1.6
1,959,223	+				-2.1
1,959,223	+				-0.9
1,959,224	-				-1.1
1,959,224	-				-1.8
1,959,224	-				-1.3
1,959,225	+				-2.7
1,959,225	+				-2.6
1,959,282	-				-1.3
1,959,282	-				-0.7
1,959,377	+				-1.0
1,959,377	+				-1.3
1,959,377	+				-0.8
1,959,377	+				-1.1
1,959,377	+				-0.6
1,959,377	+				-1.2
1,959,377	+				-1.4
1,959,377	+				-0.2
1,959,377	+				-1.6
1,959,377	+				-1.2
1,959,378	-				-1.3
1,959,378	-				-0.9
1,959,378	-				+0.3
1,959,378	-				-2.6
1,959,378	-				-2.1
1,959,378	-				+1.0
1,959,378	-				-1.4
1,959,378	-				-1.7
1,959,378	-				-1.4
1,959,378	-				-2.0
1,959,378	-				-0.8
1,959,393	+				+0.3
1,959,455	+				-2.4
1,959,509	-		ABCV34_RS09155	0.13	-1.5
1,959,584	+		ABCV34_RS09155	0.23	-1.4
1,959,585	-		ABCV34_RS09155	0.24	-0.9
1,959,605	+		ABCV34_RS09155	0.26	-1.0
1,959,606	-		ABCV34_RS09155	0.26	-1.1
1,959,606	-		ABCV34_RS09155	0.26	-1.5
1,959,606	-		ABCV34_RS09155	0.26	-1.5
1,959,606	-		ABCV34_RS09155	0.26	-1.4
1,959,698	+		ABCV34_RS09155	0.39	-1.9
1,959,699	-		ABCV34_RS09155	0.39	-1.3
1,959,699	-		ABCV34_RS09155	0.39	-1.6
1,959,699	-		ABCV34_RS09155	0.39	-2.0
1,959,772	+		ABCV34_RS09155	0.49	-0.8
1,959,802	+		ABCV34_RS09155	0.53	-1.9
1,959,803	-		ABCV34_RS09155	0.53	-1.8
1,959,861	+		ABCV34_RS09155	0.61	-1.3
1,959,861	+		ABCV34_RS09155	0.61	-0.9
1,959,861	+		ABCV34_RS09155	0.61	-1.3
1,959,861	+		ABCV34_RS09155	0.61	-1.2
1,959,862	-		ABCV34_RS09155	0.62	-1.6
1,959,862	-		ABCV34_RS09155	0.62	-0.9
1,960,026	+		ABCV34_RS09155	0.84	-1.4
1,960,026	+		ABCV34_RS09155	0.84	-1.5
1,960,026	+		ABCV34_RS09155	0.84	-1.0
1,960,026	+		ABCV34_RS09155	0.84	-2.4
1,960,026	+		ABCV34_RS09155	0.84	-1.6
1,960,026	+		ABCV34_RS09155	0.84	-3.5
1,960,026	+		ABCV34_RS09155	0.84	-1.5
1,960,026	+		ABCV34_RS09155	0.84	-1.0
1,960,026	+		ABCV34_RS09155	0.84	-1.9
1,960,026	+		ABCV34_RS09155	0.84	-1.4
1,960,026	+		ABCV34_RS09155	0.84	-1.9
1,960,026	+		ABCV34_RS09155	0.84	-1.4
1,960,026	+		ABCV34_RS09155	0.84	-0.7
1,960,026	+		ABCV34_RS09155	0.84	-1.8
1,960,027	-		ABCV34_RS09155	0.84	-1.2
1,960,027	-		ABCV34_RS09155	0.84	-1.9
1,960,027	-		ABCV34_RS09155	0.84	-3.1
1,960,027	-		ABCV34_RS09155	0.84	-0.8
1,960,027	-		ABCV34_RS09155	0.84	-2.0
1,960,027	-		ABCV34_RS09155	0.84	-1.3
1,960,027	-		ABCV34_RS09155	0.84	-1.8
1,960,027	-		ABCV34_RS09155	0.84	-1.5
1,960,027	-		ABCV34_RS09155	0.84	-2.5
1,960,027	-		ABCV34_RS09155	0.84	-0.9
1,960,027	-		ABCV34_RS09155	0.84	-1.4
1,960,027	-		ABCV34_RS09155	0.84	-1.3
1,960,027	-		ABCV34_RS09155	0.84	-1.2
1,960,028	+		ABCV34_RS09155	0.84	-2.6
1,960,028	+		ABCV34_RS09155	0.84	-0.9
1,960,028	+		ABCV34_RS09155	0.84	-2.1
1,960,028	+		ABCV34_RS09155	0.84	-1.7
1,960,028	+		ABCV34_RS09155	0.84	-1.2
1,960,028	+		ABCV34_RS09155	0.84	-1.7
1,960,028	+		ABCV34_RS09155	0.84	-1.0
1,960,028	+		ABCV34_RS09155	0.84	-1.8
1,960,029	-		ABCV34_RS09155	0.84	-1.3
1,960,029	-		ABCV34_RS09155	0.84	+0.4
1,960,029	-		ABCV34_RS09155	0.84	-1.7
1,960,029	-		ABCV34_RS09155	0.84	-1.2
1,960,140	-				-2.3
1,960,256	+		ABCV34_RS09160	0.38	-1.2
1,960,256	+		ABCV34_RS09160	0.38	-1.3
1,960,256	+		ABCV34_RS09160	0.38	-1.1
1,960,256	+		ABCV34_RS09160	0.38	-0.3
1,960,256	+		ABCV34_RS09160	0.38	-1.7
1,960,256	+		ABCV34_RS09160	0.38	-0.6
1,960,256	+		ABCV34_RS09160	0.38	-1.5
1,960,257	-		ABCV34_RS09160	0.39	-1.0
1,960,257	-		ABCV34_RS09160	0.39	-1.2
1,960,257	-		ABCV34_RS09160	0.39	-1.9
1,960,257	-		ABCV34_RS09160	0.39	-1.3
1,960,257	-		ABCV34_RS09160	0.39	-1.6
1,960,257	-		ABCV34_RS09160	0.39	-1.3
1,960,259	-		ABCV34_RS09160	0.39	-1.2
1,960,318	+		ABCV34_RS09160	0.57	-1.0
1,960,318	+		ABCV34_RS09160	0.57	+0.8
1,960,318	+		ABCV34_RS09160	0.57	-1.4
1,960,318	+		ABCV34_RS09160	0.57	-1.0
1,960,319	-		ABCV34_RS09160	0.58	-1.3
1,960,319	-		ABCV34_RS09160	0.58	-1.6
1,960,319	-		ABCV34_RS09160	0.58	-0.6
1,960,319	-		ABCV34_RS09160	0.58	-0.6
1,960,319	-		ABCV34_RS09160	0.58	-0.6
1,960,319	-		ABCV34_RS09160	0.58	-1.2
1,960,319	-		ABCV34_RS09160	0.58	-0.8
1,960,682	+				-2.3
1,960,682	+				-1.4
1,960,683	-				-1.1
1,960,893	+		ABCV34_RS09170	0.30	-1.2
1,960,893	+		ABCV34_RS09170	0.30	-1.5
1,960,893	+		ABCV34_RS09170	0.30	-1.0
1,960,894	-		ABCV34_RS09170	0.30	-1.5
1,960,894	-		ABCV34_RS09170	0.30	-0.9
1,960,894	-		ABCV34_RS09170	0.30	+0.6
1,960,994	+		ABCV34_RS09170	0.45	-0.4
1,960,994	+		ABCV34_RS09170	0.45	-1.7
1,960,995	-		ABCV34_RS09170	0.45	-1.6
1,960,995	-		ABCV34_RS09170	0.45	-2.2
1,960,995	-		ABCV34_RS09170	0.45	-1.8
1,960,995	-		ABCV34_RS09170	0.45	-0.0
1,960,995	-		ABCV34_RS09170	0.45	-0.1
1,960,995	-		ABCV34_RS09170	0.45	-1.6
1,961,034	-		ABCV34_RS09170	0.51	-1.4