Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS06060

Experiment: Aerobic; ammonium iron(II) sulfate 10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aerobic; ammonium iron(II) sulfate 10
1,311,488	+				-1.7
1,311,489	-				-1.9
1,311,511	+				-1.6
1,311,512	-				-2.4
1,311,512	-				-0.7
1,311,512	-				-1.8
1,311,574	+				-2.0
1,311,574	+				-1.2
1,311,574	+				-1.7
1,311,574	+				-1.8
1,311,574	+				-2.0
1,311,574	+				-2.3
1,311,575	-				-1.5
1,311,575	-				-1.5
1,311,575	-				-2.1
1,311,575	-				-1.9
1,311,575	-				-1.7
1,311,577	+				-1.8
1,311,577	+				-0.3
1,311,577	+				-1.8
1,311,577	+				-2.4
1,311,577	+				-0.6
1,311,577	+				-1.6
1,311,577	+				-1.0
1,311,577	+				-0.3
1,311,577	+				-1.3
1,311,577	+				-0.3
1,311,577	+				-2.0
1,311,577	+				-1.5
1,311,577	+				-1.0
1,311,578	-				-0.8
1,311,578	-				-2.0
1,311,578	-				-1.5
1,311,578	-				-1.9
1,311,578	-				-2.0
1,311,578	-				-1.7
1,311,578	-				-2.2
1,311,578	-				-1.8
1,311,578	-				-0.6
1,311,578	-				-0.9
1,311,578	-				-2.0
1,311,578	-				-1.3
1,311,578	-				-3.2
1,311,578	-				-2.9
1,311,636	+				-0.7
1,311,636	+				-0.8
1,311,636	+				-1.7
1,311,636	+				-1.5
1,311,636	+				-2.2
1,311,636	+				-2.5
1,311,636	+				-1.8
1,311,637	-				-1.6
1,311,637	-				-1.5
1,311,639	+				-0.2
1,311,639	+				-2.1
1,311,639	+				-1.5
1,311,639	+				-0.6
1,311,639	+				-2.2
1,311,639	+				-1.2
1,311,639	+				-1.5
1,311,640	-				-1.8
1,311,640	-				-3.0
1,311,640	-				-2.2
1,311,640	-				-2.0
1,311,640	-				-0.5
1,311,640	-				-2.4
1,311,640	-				-1.4
1,311,640	-				-1.3
1,311,640	-				-1.8
1,311,640	-				-1.3
1,311,695	+				-1.4
1,311,695	+				-2.4
1,311,696	-				-2.4
1,311,696	-				-0.6
1,311,696	-				-2.1
1,311,696	-				-2.2
1,311,752	+		ABCV34_RS06055	0.14	-2.3
1,311,752	+		ABCV34_RS06055	0.14	-1.3
1,311,752	+		ABCV34_RS06055	0.14	-1.6
1,311,752	+		ABCV34_RS06055	0.14	-1.1
1,311,753	-		ABCV34_RS06055	0.15	-0.7
1,311,928	+		ABCV34_RS06055	0.47	-1.8
1,311,929	-		ABCV34_RS06055	0.47	-1.2
1,311,929	-		ABCV34_RS06055	0.47	-2.7
1,311,929	-		ABCV34_RS06055	0.47	-2.2
1,311,959	+		ABCV34_RS06055	0.52	-1.2
1,311,959	+		ABCV34_RS06055	0.52	-1.3
1,311,959	+		ABCV34_RS06055	0.52	-1.4
1,311,959	+		ABCV34_RS06055	0.52	-2.0
1,311,959	+		ABCV34_RS06055	0.52	-1.6
1,311,959	+		ABCV34_RS06055	0.52	-3.2
1,311,959	+		ABCV34_RS06055	0.52	-1.9
1,311,959	+		ABCV34_RS06055	0.52	-1.2
1,311,959	+		ABCV34_RS06055	0.52	-2.0
1,311,959	+		ABCV34_RS06055	0.52	-1.6
1,311,959	+		ABCV34_RS06055	0.52	-0.8
1,311,960	-		ABCV34_RS06055	0.53	-2.8
1,311,960	-		ABCV34_RS06055	0.53	-1.4
1,311,960	-		ABCV34_RS06055	0.53	-0.8
1,311,960	-		ABCV34_RS06055	0.53	-2.2
1,311,960	-		ABCV34_RS06055	0.53	-1.7
1,312,038	-		ABCV34_RS06055	0.67	-1.8
1,312,121	+		ABCV34_RS06055	0.82	-1.4
1,312,121	+		ABCV34_RS06055	0.82	-0.5
1,312,122	-		ABCV34_RS06055	0.83	+0.4
1,312,124	+		ABCV34_RS06055	0.83	-1.7
1,312,124	+		ABCV34_RS06055	0.83	-1.3
1,312,124	+		ABCV34_RS06055	0.83	-2.3
1,312,124	+		ABCV34_RS06055	0.83	-0.6
1,312,124	+		ABCV34_RS06055	0.83	-2.5
1,312,125	-		ABCV34_RS06055	0.83	-1.5
1,312,125	-		ABCV34_RS06055	0.83	-0.3
1,312,125	-		ABCV34_RS06055	0.83	-1.2
1,312,157	+		ABCV34_RS06055	0.89	-1.2
1,312,157	+		ABCV34_RS06055	0.89	-1.8
1,312,157	+		ABCV34_RS06055	0.89	-3.1
1,312,157	+		ABCV34_RS06055	0.89	-1.1
1,312,158	-		ABCV34_RS06055	0.89	-1.4
1,312,158	-		ABCV34_RS06055	0.89	-1.8
1,312,158	-		ABCV34_RS06055	0.89	-0.7
1,312,158	-		ABCV34_RS06055	0.89	-0.0
1,312,158	-		ABCV34_RS06055	0.89	-1.7
1,312,158	-		ABCV34_RS06055	0.89	-0.7
1,312,166	+				-1.4
1,312,166	+				-1.8
1,312,166	+				-1.4
1,312,166	+				-0.7
1,312,166	+				-0.3
1,312,166	+				-0.9
1,312,166	+				-1.8
1,312,166	+				-0.1
1,312,166	+				-0.6
1,312,166	+				-2.0
1,312,166	+				-2.1
1,312,166	+				-0.3
1,312,167	-				-2.7
1,312,167	-				-1.0
1,312,167	-				-1.8
1,312,167	-				-2.0
1,312,167	-				-1.0
1,312,167	-				-1.3
1,312,167	-				-1.3
1,312,262	+				-1.3
1,312,262	+				-3.1
1,312,262	+				-2.7
1,312,263	-				-1.3
1,312,263	-				-0.9
1,312,263	-				-0.5
1,312,263	-				-1.6
1,312,265	+				-1.9
1,312,282	+				-4.4
1,312,282	+				-1.6
1,312,282	+				-2.0
1,312,282	+				-2.0
1,312,283	-				-1.2
1,312,287	+				-1.7
1,312,288	-				-1.4
1,312,288	-				-2.2
1,312,288	-				-1.1
1,312,288	-				-0.7
1,312,288	-				-1.5
1,312,288	-				-2.5
1,312,288	-				-1.0
1,312,289	+				-1.8
1,312,289	+				-1.1
1,312,289	+				-1.0
1,312,289	+				-2.0
1,312,289	+				-1.8
1,312,289	+				-1.4
1,312,289	+				-1.1
1,312,290	-				-1.5
1,312,290	-				-0.7
1,312,290	-				-1.2
1,312,290	-				-1.9
1,312,290	-				-1.2
1,312,298	+				-3.0
1,312,298	+				-0.7
1,312,298	+				-1.4
1,312,299	-				-1.0
1,312,336	-				-1.7
1,312,394	+				-2.1
1,312,394	+				-1.4
1,312,395	-				-0.4
1,312,395	-				-1.8
1,312,404	+				-2.9
1,312,461	+		ABCV34_RS06060	0.12	-1.3
1,312,461	+		ABCV34_RS06060	0.12	-1.4
1,312,461	+		ABCV34_RS06060	0.12	-0.7
1,312,462	-		ABCV34_RS06060	0.12	-1.9
1,312,515	+		ABCV34_RS06060	0.19	-0.9
1,312,515	+		ABCV34_RS06060	0.19	+0.1
1,312,515	+		ABCV34_RS06060	0.19	+0.8
1,312,515	+		ABCV34_RS06060	0.19	-1.5
1,312,515	+		ABCV34_RS06060	0.19	-1.2
1,312,515	+		ABCV34_RS06060	0.19	-2.1
1,312,515	+		ABCV34_RS06060	0.19	-3.1
1,312,515	+		ABCV34_RS06060	0.19	-0.5
1,312,516	-		ABCV34_RS06060	0.19	-1.6
1,312,516	-		ABCV34_RS06060	0.19	-2.6
1,312,516	-		ABCV34_RS06060	0.19	-1.2
1,312,516	-		ABCV34_RS06060	0.19	-1.9
1,312,516	-		ABCV34_RS06060	0.19	-1.4
1,312,516	-		ABCV34_RS06060	0.19	-4.2
1,312,516	-		ABCV34_RS06060	0.19	-1.2
1,312,516	-		ABCV34_RS06060	0.19	-0.9
1,312,516	-		ABCV34_RS06060	0.19	+0.1
1,312,657	+		ABCV34_RS06060	0.35	-1.5
1,312,657	+		ABCV34_RS06060	0.35	-1.3
1,312,657	+		ABCV34_RS06060	0.35	-1.1
1,312,657	+		ABCV34_RS06060	0.35	-1.1
1,312,657	+		ABCV34_RS06060	0.35	-1.6
1,312,658	-		ABCV34_RS06060	0.35	-4.7
1,312,658	-		ABCV34_RS06060	0.35	-1.7
1,312,658	-		ABCV34_RS06060	0.35	+0.6
1,312,671	+		ABCV34_RS06060	0.36	-1.1
1,312,672	-		ABCV34_RS06060	0.37	-1.6
1,312,672	-		ABCV34_RS06060	0.37	-2.6
1,312,763	+		ABCV34_RS06060	0.47	-0.8
1,312,763	+		ABCV34_RS06060	0.47	-1.5
1,312,764	-		ABCV34_RS06060	0.47	-0.2
1,312,764	-		ABCV34_RS06060	0.47	-1.5
1,312,787	+		ABCV34_RS06060	0.50	-1.1
1,312,787	+		ABCV34_RS06060	0.50	-0.7
1,312,788	-		ABCV34_RS06060	0.50	-0.7
1,312,826	-		ABCV34_RS06060	0.54	-1.3
1,312,826	-		ABCV34_RS06060	0.54	+0.9
1,312,905	+		ABCV34_RS06060	0.63	-0.9
1,312,969	-		ABCV34_RS06060	0.71	-1.8
1,313,008	+		ABCV34_RS06060	0.75	-2.4
1,313,008	+		ABCV34_RS06060	0.75	-1.7
1,313,184	+				-2.5
1,313,184	+				-2.1
1,313,184	+				+0.2
1,313,184	+				-2.8
1,313,184	+				-1.4
1,313,185	-				-1.3
1,313,185	-				-0.6
1,313,185	-				-3.5
1,313,185	-				-0.8
1,313,782	+		ABCV34_RS06065	0.58	-0.5
1,313,782	+		ABCV34_RS06065	0.58	-2.7
1,313,782	+		ABCV34_RS06065	0.58	-2.5
1,313,782	+		ABCV34_RS06065	0.58	-1.7
1,313,782	+		ABCV34_RS06065	0.58	-1.3
1,313,782	+		ABCV34_RS06065	0.58	-1.3
1,313,783	-		ABCV34_RS06065	0.58	-1.9
1,313,854	+		ABCV34_RS06065	0.66	-1.4
1,313,854	+		ABCV34_RS06065	0.66	-2.3
1,313,855	-		ABCV34_RS06065	0.66	-2.9
1,313,855	-		ABCV34_RS06065	0.66	-1.7
1,313,952	+		ABCV34_RS06065	0.76	-0.8
1,313,952	+		ABCV34_RS06065	0.76	-1.1
1,313,952	+		ABCV34_RS06065	0.76	-1.6
1,313,953	-		ABCV34_RS06065	0.77	-1.4
1,313,953	-		ABCV34_RS06065	0.77	-2.0
1,313,953	-		ABCV34_RS06065	0.77	-1.7
1,313,953	-		ABCV34_RS06065	0.77	-0.9
1,313,953	-		ABCV34_RS06065	0.77	-1.3
1,313,998	+		ABCV34_RS06065	0.82	-0.6
1,313,998	+		ABCV34_RS06065	0.82	-2.3
1,313,998	+		ABCV34_RS06065	0.82	-1.6
1,313,998	+		ABCV34_RS06065	0.82	-0.9
1,313,999	-		ABCV34_RS06065	0.82	-2.0
1,313,999	-		ABCV34_RS06065	0.82	-1.9
1,313,999	-		ABCV34_RS06065	0.82	-3.8
1,313,999	-		ABCV34_RS06065	0.82	-1.0
1,313,999	-		ABCV34_RS06065	0.82	-1.5
1,313,999	-		ABCV34_RS06065	0.82	-0.5
1,313,999	-		ABCV34_RS06065	0.82	-2.3
1,313,999	-		ABCV34_RS06065	0.82	-0.6
1,314,064	+		ABCV34_RS06065	0.89	-0.2
1,314,064	+		ABCV34_RS06065	0.89	-1.2
1,314,064	+		ABCV34_RS06065	0.89	-1.3
1,314,064	+		ABCV34_RS06065	0.89	-2.1
1,314,065	-		ABCV34_RS06065	0.89	-1.2
1,314,065	-		ABCV34_RS06065	0.89	-0.0
1,314,065	-		ABCV34_RS06065	0.89	-1.0
1,314,065	-		ABCV34_RS06065	0.89	-1.8
1,314,065	-		ABCV34_RS06065	0.89	-2.3
1,314,128	+				-2.9