Experiment: Parafilmed volatile R2A_HEPES agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS01420 and ABIE51_RS01425 are separated by 248 nucleotides ABIE51_RS01425 and ABIE51_RS01430 are separated by 133 nucleotides
ABIE51_RS01420: ABIE51_RS01420 - nitronate monooxygenase, at 310,161 to 311,201
_RS01420
ABIE51_RS01425: ABIE51_RS01425 - hypothetical protein, at 311,450 to 311,689
_RS01425
ABIE51_RS01430: ABIE51_RS01430 - amino acid permease, at 311,823 to 313,205
_RS01430
Position (kb) 311
312 Strain fitness (log2 ratio) -1
0
1 at 310.924 kb on + strand, within ABIE51_RS01420 at 310.925 kb on - strand, within ABIE51_RS01420 at 310.928 kb on - strand, within ABIE51_RS01420 at 310.928 kb on - strand, within ABIE51_RS01420 at 310.928 kb on - strand, within ABIE51_RS01420 at 311.052 kb on + strand, within ABIE51_RS01420 at 311.212 kb on + strand at 311.212 kb on + strand at 311.212 kb on + strand at 311.212 kb on + strand at 311.212 kb on + strand at 311.212 kb on + strand at 311.213 kb on - strand at 311.213 kb on - strand at 311.213 kb on - strand at 311.235 kb on + strand at 311.236 kb on - strand at 311.493 kb on + strand, within ABIE51_RS01425 at 311.493 kb on + strand, within ABIE51_RS01425 at 311.494 kb on - strand, within ABIE51_RS01425 at 311.494 kb on - strand, within ABIE51_RS01425 at 311.582 kb on + strand, within ABIE51_RS01425 at 311.582 kb on + strand, within ABIE51_RS01425 at 311.582 kb on + strand, within ABIE51_RS01425 at 311.583 kb on - strand, within ABIE51_RS01425 at 311.583 kb on - strand, within ABIE51_RS01425 at 311.583 kb on - strand, within ABIE51_RS01425 at 311.583 kb on - strand, within ABIE51_RS01425 at 311.583 kb on - strand, within ABIE51_RS01425 at 311.683 kb on + strand at 311.717 kb on - strand at 311.717 kb on - strand at 311.789 kb on + strand at 312.075 kb on + strand, within ABIE51_RS01430 at 312.075 kb on + strand, within ABIE51_RS01430 at 312.076 kb on - strand, within ABIE51_RS01430 at 312.579 kb on + strand, within ABIE51_RS01430 at 312.579 kb on + strand, within ABIE51_RS01430 at 312.579 kb on + strand, within ABIE51_RS01430 at 312.580 kb on - strand, within ABIE51_RS01430 at 312.672 kb on - strand, within ABIE51_RS01430 at 312.672 kb on - strand, within ABIE51_RS01430 at 312.679 kb on - strand, within ABIE51_RS01430
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile R2A_HEPES agar plate with no fungus remove 310,924 + ABIE51_RS01420 0.73 +0.7 310,925 - ABIE51_RS01420 0.73 -0.2 310,928 - ABIE51_RS01420 0.74 +0.1 310,928 - ABIE51_RS01420 0.74 +0.3 310,928 - ABIE51_RS01420 0.74 +1.0 311,052 + ABIE51_RS01420 0.86 -0.2 311,212 + -0.9 311,212 + +0.6 311,212 + +0.1 311,212 + +1.4 311,212 + -0.6 311,212 + -0.4 311,213 - -0.1 311,213 - -0.5 311,213 - +0.0 311,235 + +0.5 311,236 - -0.6 311,493 + ABIE51_RS01425 0.18 -0.1 311,493 + ABIE51_RS01425 0.18 -0.7 311,494 - ABIE51_RS01425 0.18 +0.3 311,494 - ABIE51_RS01425 0.18 +0.2 311,582 + ABIE51_RS01425 0.55 -0.2 311,582 + ABIE51_RS01425 0.55 -0.2 311,582 + ABIE51_RS01425 0.55 -1.4 311,583 - ABIE51_RS01425 0.55 -0.5 311,583 - ABIE51_RS01425 0.55 -1.6 311,583 - ABIE51_RS01425 0.55 +0.0 311,583 - ABIE51_RS01425 0.55 -1.2 311,583 - ABIE51_RS01425 0.55 -0.5 311,683 + -0.2 311,717 - -0.1 311,717 - -0.4 311,789 + +0.6 312,075 + ABIE51_RS01430 0.18 +0.8 312,075 + ABIE51_RS01430 0.18 -0.0 312,076 - ABIE51_RS01430 0.18 +0.3 312,579 + ABIE51_RS01430 0.55 +0.0 312,579 + ABIE51_RS01430 0.55 -0.7 312,579 + ABIE51_RS01430 0.55 -0.6 312,580 - ABIE51_RS01430 0.55 +0.2 312,672 - ABIE51_RS01430 0.61 -0.4 312,672 - ABIE51_RS01430 0.61 -0.4 312,679 - ABIE51_RS01430 0.62 +0.1
Or see this region's nucleotide sequence