Experiment: Parafilmed volatile R2A_HEPES agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS14665 and ABIE51_RS14670 are separated by 80 nucleotides
ABIE51_RS14665: ABIE51_RS14665 - glycosyltransferase family 4 protein, at 3,183,318 to 3,184,376
_RS14665
ABIE51_RS14670: ABIE51_RS14670 - amylo-alpha-1,6-glucosidase, at 3,184,457 to 3,186,574
_RS14670
Position (kb)
3184
3185
3186
3187 Strain fitness (log2 ratio)
-2
-1
0
1 at 3183.699 kb on + strand, within ABIE51_RS14665 at 3183.699 kb on + strand, within ABIE51_RS14665 at 3183.700 kb on - strand, within ABIE51_RS14665 at 3183.700 kb on - strand, within ABIE51_RS14665 at 3183.700 kb on - strand, within ABIE51_RS14665 at 3183.840 kb on + strand, within ABIE51_RS14665 at 3183.960 kb on + strand, within ABIE51_RS14665 at 3183.961 kb on - strand, within ABIE51_RS14665 at 3184.008 kb on + strand, within ABIE51_RS14665 at 3184.009 kb on - strand, within ABIE51_RS14665 at 3184.327 kb on - strand at 3184.493 kb on + strand at 3184.494 kb on - strand at 3184.799 kb on + strand, within ABIE51_RS14670 at 3185.066 kb on + strand, within ABIE51_RS14670 at 3185.067 kb on - strand, within ABIE51_RS14670 at 3185.666 kb on + strand, within ABIE51_RS14670 at 3185.786 kb on + strand, within ABIE51_RS14670 at 3185.786 kb on + strand, within ABIE51_RS14670 at 3185.786 kb on + strand, within ABIE51_RS14670 at 3185.787 kb on - strand, within ABIE51_RS14670 at 3185.924 kb on + strand, within ABIE51_RS14670 at 3185.993 kb on + strand, within ABIE51_RS14670 at 3185.993 kb on + strand, within ABIE51_RS14670 at 3186.104 kb on + strand, within ABIE51_RS14670 at 3186.105 kb on - strand, within ABIE51_RS14670 at 3186.180 kb on - strand, within ABIE51_RS14670 at 3186.578 kb on - strand at 3187.049 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile R2A_HEPES agar plate with no fungus remove 3,183,699 + ABIE51_RS14665 0.36 +1.0 3,183,699 + ABIE51_RS14665 0.36 -0.3 3,183,700 - ABIE51_RS14665 0.36 +0.8 3,183,700 - ABIE51_RS14665 0.36 +0.1 3,183,700 - ABIE51_RS14665 0.36 +0.7 3,183,840 + ABIE51_RS14665 0.49 -0.6 3,183,960 + ABIE51_RS14665 0.61 +0.3 3,183,961 - ABIE51_RS14665 0.61 -0.0 3,184,008 + ABIE51_RS14665 0.65 -0.4 3,184,009 - ABIE51_RS14665 0.65 -0.3 3,184,327 - -0.1 3,184,493 + +0.0 3,184,494 - -0.1 3,184,799 + ABIE51_RS14670 0.16 +0.3 3,185,066 + ABIE51_RS14670 0.29 -0.3 3,185,067 - ABIE51_RS14670 0.29 +0.5 3,185,666 + ABIE51_RS14670 0.57 +0.1 3,185,786 + ABIE51_RS14670 0.63 +0.4 3,185,786 + ABIE51_RS14670 0.63 +0.7 3,185,786 + ABIE51_RS14670 0.63 -0.1 3,185,787 - ABIE51_RS14670 0.63 +0.7 3,185,924 + ABIE51_RS14670 0.69 +0.0 3,185,993 + ABIE51_RS14670 0.73 +0.1 3,185,993 + ABIE51_RS14670 0.73 -1.8 3,186,104 + ABIE51_RS14670 0.78 +0.4 3,186,105 - ABIE51_RS14670 0.78 +0.1 3,186,180 - ABIE51_RS14670 0.81 -0.4 3,186,578 - -0.3 3,187,049 - +0.5
Or see this region's nucleotide sequence