Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS07440

Experiment: Aerobic; Uranyl acetate 80

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABCV34_RS07435 and ABCV34_RS07440 are separated by 66 nucleotidesABCV34_RS07440 and ABCV34_RS07445 are separated by 146 nucleotides ABCV34_RS07435: ABCV34_RS07435 - pitrilysin family protein, at 1,595,811 to 1,598,558 _RS07435 ABCV34_RS07440: ABCV34_RS07440 - molecular chaperone DnaJ, at 1,598,625 to 1,599,755 _RS07440 ABCV34_RS07445: ABCV34_RS07445 - molecular chaperone DnaK, at 1,599,902 to 1,601,824 _RS07445 Position (kb) 1598 1599 1600Strain fitness (log2 ratio) -3 -2 -1 0 1at 1597.668 kb on - strand, within ABCV34_RS07435at 1597.701 kb on + strand, within ABCV34_RS07435at 1597.701 kb on + strand, within ABCV34_RS07435at 1597.701 kb on + strand, within ABCV34_RS07435at 1597.701 kb on + strand, within ABCV34_RS07435at 1597.701 kb on + strand, within ABCV34_RS07435at 1597.701 kb on + strand, within ABCV34_RS07435at 1597.701 kb on + strand, within ABCV34_RS07435at 1597.702 kb on - strand, within ABCV34_RS07435at 1597.702 kb on - strand, within ABCV34_RS07435at 1597.702 kb on - strand, within ABCV34_RS07435at 1597.763 kb on + strand, within ABCV34_RS07435at 1597.763 kb on + strand, within ABCV34_RS07435at 1597.843 kb on - strand, within ABCV34_RS07435at 1597.947 kb on + strand, within ABCV34_RS07435at 1597.947 kb on + strand, within ABCV34_RS07435at 1597.947 kb on + strand, within ABCV34_RS07435at 1597.947 kb on + strand, within ABCV34_RS07435at 1597.947 kb on + strand, within ABCV34_RS07435at 1597.947 kb on + strand, within ABCV34_RS07435at 1597.948 kb on - strand, within ABCV34_RS07435at 1597.948 kb on - strand, within ABCV34_RS07435at 1597.948 kb on - strand, within ABCV34_RS07435at 1597.948 kb on - strand, within ABCV34_RS07435at 1597.948 kb on - strand, within ABCV34_RS07435at 1597.948 kb on - strand, within ABCV34_RS07435at 1597.948 kb on - strand, within ABCV34_RS07435at 1597.972 kb on - strand, within ABCV34_RS07435at 1598.028 kb on + strand, within ABCV34_RS07435at 1598.028 kb on + strand, within ABCV34_RS07435at 1598.028 kb on + strand, within ABCV34_RS07435at 1598.028 kb on + strand, within ABCV34_RS07435at 1598.028 kb on + strand, within ABCV34_RS07435at 1598.029 kb on - strand, within ABCV34_RS07435at 1598.029 kb on - strand, within ABCV34_RS07435at 1598.060 kb on + strand, within ABCV34_RS07435at 1598.097 kb on + strand, within ABCV34_RS07435at 1598.097 kb on + strand, within ABCV34_RS07435at 1598.098 kb on - strand, within ABCV34_RS07435at 1598.098 kb on - strand, within ABCV34_RS07435at 1598.098 kb on - strand, within ABCV34_RS07435at 1598.098 kb on - strand, within ABCV34_RS07435at 1598.098 kb on - strand, within ABCV34_RS07435at 1598.098 kb on - strand, within ABCV34_RS07435at 1598.163 kb on + strand, within ABCV34_RS07435at 1598.164 kb on - strand, within ABCV34_RS07435at 1598.164 kb on - strand, within ABCV34_RS07435at 1598.182 kb on + strand, within ABCV34_RS07435at 1598.183 kb on - strand, within ABCV34_RS07435at 1598.183 kb on - strand, within ABCV34_RS07435at 1598.183 kb on - strand, within ABCV34_RS07435at 1598.183 kb on - strand, within ABCV34_RS07435at 1598.349 kb on + strandat 1598.350 kb on - strandat 1598.403 kb on + strandat 1598.403 kb on + strandat 1598.403 kb on + strandat 1598.403 kb on + strandat 1598.404 kb on - strandat 1598.420 kb on + strandat 1598.421 kb on - strandat 1598.421 kb on - strandat 1598.556 kb on + strandat 1598.556 kb on + strandat 1598.557 kb on - strandat 1598.557 kb on - strandat 1599.756 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.015 kb on - strandat 1600.165 kb on - strand, within ABCV34_RS07445

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Per-strain Table

Position Strand Gene LocusTag Fraction Aerobic; Uranyl acetate 80
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1,597,668 - ABCV34_RS07435 0.68 -2.3
1,597,701 + ABCV34_RS07435 0.69 -1.8
1,597,701 + ABCV34_RS07435 0.69 -1.5
1,597,701 + ABCV34_RS07435 0.69 -1.3
1,597,701 + ABCV34_RS07435 0.69 -2.0
1,597,701 + ABCV34_RS07435 0.69 -1.8
1,597,701 + ABCV34_RS07435 0.69 -1.5
1,597,701 + ABCV34_RS07435 0.69 -2.9
1,597,702 - ABCV34_RS07435 0.69 -1.3
1,597,702 - ABCV34_RS07435 0.69 -1.6
1,597,702 - ABCV34_RS07435 0.69 -2.5
1,597,763 + ABCV34_RS07435 0.71 -1.4
1,597,763 + ABCV34_RS07435 0.71 -0.5
1,597,843 - ABCV34_RS07435 0.74 -1.1
1,597,947 + ABCV34_RS07435 0.78 -1.6
1,597,947 + ABCV34_RS07435 0.78 -1.7
1,597,947 + ABCV34_RS07435 0.78 -2.7
1,597,947 + ABCV34_RS07435 0.78 -1.2
1,597,947 + ABCV34_RS07435 0.78 -0.1
1,597,947 + ABCV34_RS07435 0.78 -1.7
1,597,948 - ABCV34_RS07435 0.78 -1.5
1,597,948 - ABCV34_RS07435 0.78 +0.1
1,597,948 - ABCV34_RS07435 0.78 -0.2
1,597,948 - ABCV34_RS07435 0.78 -2.0
1,597,948 - ABCV34_RS07435 0.78 -1.3
1,597,948 - ABCV34_RS07435 0.78 -1.7
1,597,948 - ABCV34_RS07435 0.78 -0.5
1,597,972 - ABCV34_RS07435 0.79 -1.6
1,598,028 + ABCV34_RS07435 0.81 -0.8
1,598,028 + ABCV34_RS07435 0.81 -2.5
1,598,028 + ABCV34_RS07435 0.81 -1.3
1,598,028 + ABCV34_RS07435 0.81 -1.7
1,598,028 + ABCV34_RS07435 0.81 -3.2
1,598,029 - ABCV34_RS07435 0.81 -1.6
1,598,029 - ABCV34_RS07435 0.81 -1.1
1,598,060 + ABCV34_RS07435 0.82 -0.8
1,598,097 + ABCV34_RS07435 0.83 -0.1
1,598,097 + ABCV34_RS07435 0.83 -0.5
1,598,098 - ABCV34_RS07435 0.83 -1.9
1,598,098 - ABCV34_RS07435 0.83 -1.5
1,598,098 - ABCV34_RS07435 0.83 -1.8
1,598,098 - ABCV34_RS07435 0.83 +0.7
1,598,098 - ABCV34_RS07435 0.83 -2.5
1,598,098 - ABCV34_RS07435 0.83 -3.0
1,598,163 + ABCV34_RS07435 0.86 -1.8
1,598,164 - ABCV34_RS07435 0.86 -2.4
1,598,164 - ABCV34_RS07435 0.86 -1.3
1,598,182 + ABCV34_RS07435 0.86 -1.6
1,598,183 - ABCV34_RS07435 0.86 -1.1
1,598,183 - ABCV34_RS07435 0.86 -2.0
1,598,183 - ABCV34_RS07435 0.86 -1.5
1,598,183 - ABCV34_RS07435 0.86 -0.8
1,598,349 + -1.1
1,598,350 - -2.2
1,598,403 + -2.1
1,598,403 + -1.5
1,598,403 + -1.3
1,598,403 + -2.4
1,598,404 - -2.7
1,598,420 + -1.7
1,598,421 - -1.5
1,598,421 - -1.8
1,598,556 + -1.2
1,598,556 + -2.2
1,598,557 - -0.5
1,598,557 - -1.1
1,599,756 - -1.2
1,600,015 - -1.5
1,600,015 - -3.2
1,600,015 - -1.9
1,600,015 - -2.9
1,600,015 - -1.6
1,600,015 - -2.7
1,600,015 - -2.5
1,600,015 - -1.8
1,600,015 - -1.1
1,600,015 - -1.3
1,600,015 - -3.6
1,600,015 - -1.8
1,600,015 - -1.2
1,600,015 - -2.0
1,600,015 - -2.3
1,600,015 - -1.8
1,600,015 - -1.0
1,600,165 - ABCV34_RS07445 0.14 -1.0

Or see this region's nucleotide sequence