Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS15040

Experiment: Aerobic; Aluminium sulfate 215

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aerobic; Aluminium sulfate 215
3,186,795	-		ABCV34_RS15030	0.73	-1.6
3,186,926	+				-1.6
3,186,926	+				-0.2
3,186,976	+				-3.9
3,186,977	-				-2.4
3,187,116	+		ABCV34_RS15035	0.20	-2.1
3,187,117	-		ABCV34_RS15035	0.20	-1.7
3,187,234	+		ABCV34_RS15035	0.39	-1.9
3,187,234	+		ABCV34_RS15035	0.39	-1.9
3,187,234	+		ABCV34_RS15035	0.39	-1.1
3,187,234	+		ABCV34_RS15035	0.39	-1.2
3,187,234	+		ABCV34_RS15035	0.39	-2.2
3,187,234	+		ABCV34_RS15035	0.39	-0.4
3,187,234	+		ABCV34_RS15035	0.39	-2.0
3,187,234	+		ABCV34_RS15035	0.39	-1.2
3,187,234	+		ABCV34_RS15035	0.39	-1.0
3,187,234	+		ABCV34_RS15035	0.39	-1.4
3,187,234	+		ABCV34_RS15035	0.39	-1.5
3,187,235	-		ABCV34_RS15035	0.39	-0.8
3,187,235	-		ABCV34_RS15035	0.39	-1.6
3,187,235	-		ABCV34_RS15035	0.39	-2.0
3,187,235	-		ABCV34_RS15035	0.39	-0.6
3,187,235	-		ABCV34_RS15035	0.39	-1.0
3,187,235	-		ABCV34_RS15035	0.39	-2.5
3,187,235	-		ABCV34_RS15035	0.39	-1.6
3,187,235	-		ABCV34_RS15035	0.39	-1.6
3,187,235	-		ABCV34_RS15035	0.39	-1.5
3,187,235	-		ABCV34_RS15035	0.39	-1.9
3,187,235	-		ABCV34_RS15035	0.39	-1.7
3,187,237	+		ABCV34_RS15035	0.39	-1.6
3,187,237	+		ABCV34_RS15035	0.39	-1.6
3,187,237	+		ABCV34_RS15035	0.39	-2.4
3,187,237	+		ABCV34_RS15035	0.39	-1.5
3,187,238	-		ABCV34_RS15035	0.39	-1.3
3,187,261	+		ABCV34_RS15035	0.43	-1.2
3,187,262	-		ABCV34_RS15035	0.43	-2.1
3,187,388	+		ABCV34_RS15035	0.63	-1.4
3,187,388	+		ABCV34_RS15035	0.63	-2.9
3,187,402	+		ABCV34_RS15035	0.65	-1.6
3,187,402	+		ABCV34_RS15035	0.65	-1.4
3,187,402	+		ABCV34_RS15035	0.65	-1.1
3,187,402	+		ABCV34_RS15035	0.65	-1.7
3,187,403	-		ABCV34_RS15035	0.65	-0.7
3,187,403	-		ABCV34_RS15035	0.65	-2.1
3,187,403	-		ABCV34_RS15035	0.65	-1.7
3,187,537	+		ABCV34_RS15035	0.86	-1.5
3,187,537	+		ABCV34_RS15035	0.86	-0.9
3,187,537	+		ABCV34_RS15035	0.86	-1.9
3,187,538	-		ABCV34_RS15035	0.87	-1.5
3,187,538	-		ABCV34_RS15035	0.87	-2.0
3,187,564	+				-2.1
3,187,564	+				-1.9
3,187,565	-				-1.0
3,187,631	+				-1.0
3,187,631	+				-2.1
3,187,631	+				-1.6
3,187,631	+				-1.1
3,187,632	-				-1.7
3,187,675	+				-1.8
3,187,676	-				-2.2
3,187,676	-				-2.1
3,187,822	-		ABCV34_RS15040	0.27	-2.0
3,187,822	-		ABCV34_RS15040	0.27	-1.4
3,187,823	+		ABCV34_RS15040	0.28	-1.4
3,187,823	+		ABCV34_RS15040	0.28	-1.7
3,187,823	+		ABCV34_RS15040	0.28	-1.0
3,187,823	+		ABCV34_RS15040	0.28	-2.4
3,187,823	+		ABCV34_RS15040	0.28	-1.8
3,187,824	-		ABCV34_RS15040	0.28	-1.4
3,187,824	-		ABCV34_RS15040	0.28	-2.0
3,187,824	-		ABCV34_RS15040	0.28	-1.5
3,187,824	-		ABCV34_RS15040	0.28	-1.9
3,187,824	-		ABCV34_RS15040	0.28	-1.5
3,187,824	-		ABCV34_RS15040	0.28	-2.0
3,187,824	-		ABCV34_RS15040	0.28	-2.0
3,187,883	+		ABCV34_RS15040	0.36	-1.4
3,187,883	+		ABCV34_RS15040	0.36	-1.7
3,187,884	-		ABCV34_RS15040	0.36	-1.0
3,187,884	-		ABCV34_RS15040	0.36	-1.7
3,187,913	+		ABCV34_RS15040	0.40	-1.6
3,187,913	+		ABCV34_RS15040	0.40	-1.1
3,187,914	-		ABCV34_RS15040	0.40	-2.0
3,187,914	-		ABCV34_RS15040	0.40	-1.7
3,187,914	-		ABCV34_RS15040	0.40	-0.2
3,187,914	-		ABCV34_RS15040	0.40	-1.6
3,187,914	-		ABCV34_RS15040	0.40	-1.8
3,188,112	+		ABCV34_RS15040	0.68	-1.9
3,188,112	+		ABCV34_RS15040	0.68	-0.4
3,188,113	-		ABCV34_RS15040	0.68	-1.5
3,188,113	-		ABCV34_RS15040	0.68	-1.4
3,188,327	+				-2.3
3,188,327	+				-0.3
3,188,327	+				-1.4
3,188,327	+				-0.8
3,188,327	+				-0.8
3,188,327	+				-1.5
3,188,327	+				-1.2
3,188,327	+				-1.9
3,188,327	+				-2.0
3,188,327	+				-2.6
3,188,327	+				-1.9
3,188,327	+				-0.4
3,188,327	+				-1.6
3,188,327	+				-1.3
3,188,327	+				-1.9
3,188,327	+				-2.6
3,188,327	+				-1.9
3,188,327	+				-0.4
3,188,328	-				-2.2
3,188,328	-				-2.5
3,188,328	-				-2.3
3,188,328	-				-1.4
3,188,328	-				-1.4
3,188,328	-				-2.0
3,188,328	-				-2.0
3,188,328	-				-1.6
3,188,356	-				-0.2
3,188,411	+				-1.9
3,188,411	+				-1.3
3,188,411	+				-0.6
3,188,411	+				-0.4
3,188,411	+				-2.1
3,188,411	+				-2.1
3,188,411	+				-0.8
3,188,411	+				-2.0
3,188,412	-				-1.0
3,188,412	-				-1.9
3,188,412	-				-0.5
3,188,412	-				-1.5
3,188,412	-				-1.8
3,188,413	+				-1.7
3,188,413	+				-2.7
3,188,413	+				-1.5
3,188,413	+				-2.4
3,188,413	+				-0.7
3,188,413	+				-1.8
3,188,413	+				-1.3
3,188,413	+				-1.8
3,188,413	+				-2.4
3,188,413	+				-1.0
3,188,413	+				-1.4
3,188,413	+				-3.1
3,188,413	+				-0.3
3,188,413	+				-2.1
3,188,413	+				-0.6
3,188,413	+				-2.1
3,188,413	+				-1.8
3,188,413	+				-1.9
3,188,413	+				-1.8
3,188,414	-				-1.4
3,188,414	-				-1.5
3,188,414	-				-0.9
3,188,414	-				-1.0
3,188,414	-				-2.1
3,188,414	-				-1.7
3,188,414	-				-1.3
3,188,414	-				-1.8
3,188,519	+				-2.1
3,188,519	+				-1.8
3,188,520	-				-3.0
3,188,520	-				-0.1
3,188,520	-				-1.5
3,188,657	-				-1.0
3,188,736	+		ABCV34_RS15045	0.14	-1.2
3,188,740	+		ABCV34_RS15045	0.15	-1.3
3,188,740	+		ABCV34_RS15045	0.15	-1.1
3,188,740	+		ABCV34_RS15045	0.15	-1.4
3,188,740	+		ABCV34_RS15045	0.15	-1.1
3,188,740	+		ABCV34_RS15045	0.15	-1.6
3,188,740	+		ABCV34_RS15045	0.15	-0.4
3,188,740	+		ABCV34_RS15045	0.15	-0.4
3,188,740	+		ABCV34_RS15045	0.15	-1.6
3,188,740	+		ABCV34_RS15045	0.15	-2.5
3,188,741	-		ABCV34_RS15045	0.15	-2.1
3,188,741	-		ABCV34_RS15045	0.15	-1.6
3,188,741	-		ABCV34_RS15045	0.15	-0.8
3,188,741	-		ABCV34_RS15045	0.15	-1.8
3,188,741	-		ABCV34_RS15045	0.15	-1.2
3,188,744	+		ABCV34_RS15045	0.15	-1.1
3,188,744	+		ABCV34_RS15045	0.15	-0.6
3,188,744	+		ABCV34_RS15045	0.15	-1.3
3,188,744	+		ABCV34_RS15045	0.15	-1.8
3,188,744	+		ABCV34_RS15045	0.15	-3.8
3,188,744	+		ABCV34_RS15045	0.15	-1.7
3,188,744	+		ABCV34_RS15045	0.15	-2.4
3,188,744	+		ABCV34_RS15045	0.15	-1.2
3,188,745	-		ABCV34_RS15045	0.15	-1.8
3,188,772	+		ABCV34_RS15045	0.17	-1.6
3,188,772	+		ABCV34_RS15045	0.17	-1.4
3,188,897	+		ABCV34_RS15045	0.27	-1.4
3,188,897	+		ABCV34_RS15045	0.27	-2.0
3,188,898	-		ABCV34_RS15045	0.27	-0.5
3,188,898	-		ABCV34_RS15045	0.27	-0.3
3,188,910	+		ABCV34_RS15045	0.28	-1.8
3,188,910	+		ABCV34_RS15045	0.28	+0.2
3,188,911	-		ABCV34_RS15045	0.28	-1.2
3,188,911	-		ABCV34_RS15045	0.28	-1.2
3,188,980	+		ABCV34_RS15045	0.34	-1.1
3,188,981	-		ABCV34_RS15045	0.34	-1.2
3,188,981	-		ABCV34_RS15045	0.34	-1.1
3,188,984	+		ABCV34_RS15045	0.34	-1.9
3,188,984	+		ABCV34_RS15045	0.34	-1.7
3,188,984	+		ABCV34_RS15045	0.34	-2.7
3,188,984	+		ABCV34_RS15045	0.34	-1.1
3,188,984	+		ABCV34_RS15045	0.34	-1.4
3,188,984	+		ABCV34_RS15045	0.34	-1.7
3,188,985	-		ABCV34_RS15045	0.34	-1.5
3,188,985	-		ABCV34_RS15045	0.34	-0.5
3,188,985	-		ABCV34_RS15045	0.34	+0.2
3,188,985	-		ABCV34_RS15045	0.34	-0.9
3,188,985	-		ABCV34_RS15045	0.34	-2.0
3,189,054	-		ABCV34_RS15045	0.40	-1.3