Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS15175

Experiment: Anaerobic; Cadmium acetate 1 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; Cadmium acetate 1 uM
3,220,716	-		ABCV34_RS15165	0.86	-2.6
3,220,733	+		ABCV34_RS15165	0.88	-2.9
3,220,733	+		ABCV34_RS15165	0.88	-3.2
3,220,733	+		ABCV34_RS15165	0.88	-4.8
3,220,733	+		ABCV34_RS15165	0.88	-3.8
3,220,734	-		ABCV34_RS15165	0.88	-3.7
3,220,734	-		ABCV34_RS15165	0.88	-0.0
3,220,893	+				-5.8
3,220,893	+				-4.0
3,220,893	+				-1.6
3,220,893	+				-1.8
3,220,894	-				-3.4
3,220,894	-				-2.8
3,220,894	-				-3.6
3,220,894	-				-5.5
3,220,894	-				-2.7
3,220,944	+				-4.4
3,220,944	+				-5.5
3,220,944	+				-3.7
3,220,944	+				-2.4
3,220,944	+				-4.9
3,220,944	+				-3.1
3,220,944	+				-1.6
3,220,944	+				-3.7
3,220,944	+				-3.7
3,220,944	+				-2.2
3,220,944	+				-4.4
3,220,944	+				-4.4
3,220,944	+				-4.3
3,220,945	-				-7.1
3,220,945	-				-3.5
3,220,945	-				-3.9
3,220,945	-				-4.9
3,220,945	-				-3.9
3,220,945	-				-3.8
3,220,945	-				-3.1
3,220,945	-				-5.9
3,220,945	-				-4.5
3,220,945	-				-3.0
3,220,945	-				-4.0
3,220,945	-				-4.6
3,220,945	-				-1.4
3,220,945	-				-3.1
3,221,089	+		ABCV34_RS15170	0.22	-4.4
3,221,089	+		ABCV34_RS15170	0.22	-2.4
3,221,089	+		ABCV34_RS15170	0.22	-4.1
3,221,089	+		ABCV34_RS15170	0.22	-3.5
3,221,090	-		ABCV34_RS15170	0.22	-1.6
3,221,090	-		ABCV34_RS15170	0.22	-3.4
3,221,131	+		ABCV34_RS15170	0.28	-2.7
3,221,131	+		ABCV34_RS15170	0.28	-1.6
3,221,132	-		ABCV34_RS15170	0.28	-4.4
3,221,132	-		ABCV34_RS15170	0.28	-3.1
3,221,132	-		ABCV34_RS15170	0.28	-5.9
3,221,132	-		ABCV34_RS15170	0.28	-3.2
3,221,132	-		ABCV34_RS15170	0.28	-4.0
3,221,132	-		ABCV34_RS15170	0.28	-1.0
3,221,132	-		ABCV34_RS15170	0.28	-3.7
3,221,239	+		ABCV34_RS15170	0.44	-4.0
3,221,239	+		ABCV34_RS15170	0.44	-4.7
3,221,239	+		ABCV34_RS15170	0.44	-5.7
3,221,239	+		ABCV34_RS15170	0.44	-4.0
3,221,240	-		ABCV34_RS15170	0.44	-4.3
3,221,240	-		ABCV34_RS15170	0.44	-3.6
3,221,284	+		ABCV34_RS15170	0.50	-2.7
3,221,284	+		ABCV34_RS15170	0.50	-3.8
3,221,284	+		ABCV34_RS15170	0.50	-3.5
3,221,284	+		ABCV34_RS15170	0.50	-2.9
3,221,284	+		ABCV34_RS15170	0.50	-2.7
3,221,284	+		ABCV34_RS15170	0.50	-4.6
3,221,285	-		ABCV34_RS15170	0.50	-4.5
3,221,285	-		ABCV34_RS15170	0.50	-3.7
3,221,407	+		ABCV34_RS15170	0.68	-3.0
3,221,407	+		ABCV34_RS15170	0.68	-4.9
3,221,408	-		ABCV34_RS15170	0.68	-3.5
3,221,626	+				-3.0
3,221,626	+				-1.8
3,221,647	-				-4.2
3,221,674	+				-4.7
3,221,674	+				-4.4
3,221,674	+				-5.7
3,221,674	+				-2.0
3,221,674	+				-4.1
3,221,674	+				-4.4
3,221,675	-				-1.0
3,221,675	-				-3.1
3,221,680	+				-3.5
3,221,680	+				-3.6
3,221,680	+				-5.2
3,221,680	+				-3.5
3,221,680	+				-4.5
3,221,680	+				-3.7
3,221,680	+				-4.9
3,221,680	+				-3.5
3,221,681	-				-4.6
3,221,681	-				-1.8
3,221,681	-				-1.6
3,221,681	-				-3.7
3,221,681	-				-4.0
3,221,681	-				-1.6
3,221,681	-				-5.8
3,221,737	+		ABCV34_RS15175	0.14	-4.3
3,221,737	+		ABCV34_RS15175	0.14	-3.7
3,221,737	+		ABCV34_RS15175	0.14	-2.5
3,221,737	+		ABCV34_RS15175	0.14	-4.3
3,221,737	+		ABCV34_RS15175	0.14	-4.2
3,221,737	+		ABCV34_RS15175	0.14	-3.4
3,221,737	+		ABCV34_RS15175	0.14	-4.7
3,221,737	+		ABCV34_RS15175	0.14	-3.8
3,221,737	+		ABCV34_RS15175	0.14	-3.0
3,221,737	+		ABCV34_RS15175	0.14	-3.0
3,221,738	-		ABCV34_RS15175	0.15	-3.3
3,221,738	-		ABCV34_RS15175	0.15	-4.4
3,221,738	-		ABCV34_RS15175	0.15	-3.9
3,221,738	-		ABCV34_RS15175	0.15	-3.1
3,221,738	-		ABCV34_RS15175	0.15	-3.1
3,221,738	-		ABCV34_RS15175	0.15	-3.6
3,221,738	-		ABCV34_RS15175	0.15	-4.8
3,221,738	-		ABCV34_RS15175	0.15	-3.3
3,221,738	-		ABCV34_RS15175	0.15	-2.1
3,221,738	-		ABCV34_RS15175	0.15	-3.8
3,221,870	-		ABCV34_RS15175	0.34	-4.2
3,221,874	+		ABCV34_RS15175	0.34	-5.2
3,221,874	+		ABCV34_RS15175	0.34	-3.2
3,221,874	+		ABCV34_RS15175	0.34	-4.4
3,221,874	+		ABCV34_RS15175	0.34	-5.4
3,221,875	-		ABCV34_RS15175	0.34	-4.6
3,221,875	-		ABCV34_RS15175	0.34	-2.4
3,222,283	+				-3.8
3,222,283	+				-3.5
3,222,283	+				-4.4
3,222,283	+				-3.7
3,222,284	-				-3.6
3,222,284	-				-3.8
3,222,284	-				-1.6
3,222,437	+				-0.8
3,222,438	-				-1.4
3,222,438	-				-1.2
3,222,711	+		ABCV34_RS15180	0.14	-0.7
3,222,711	+		ABCV34_RS15180	0.14	-1.3
3,222,711	+		ABCV34_RS15180	0.14	-1.4
3,222,712	-		ABCV34_RS15180	0.14	-0.8
3,222,712	-		ABCV34_RS15180	0.14	-1.6
3,222,712	-		ABCV34_RS15180	0.14	-2.4
3,222,712	-		ABCV34_RS15180	0.14	-2.0
3,222,712	-		ABCV34_RS15180	0.14	-3.0
3,222,805	+		ABCV34_RS15180	0.19	-1.6
3,222,806	-		ABCV34_RS15180	0.19	-3.0
3,222,841	-		ABCV34_RS15180	0.21	-1.1
3,222,854	+		ABCV34_RS15180	0.21	-1.8
3,222,854	+		ABCV34_RS15180	0.21	-1.8
3,222,854	+		ABCV34_RS15180	0.21	-0.9
3,222,854	+		ABCV34_RS15180	0.21	-2.9
3,222,855	-		ABCV34_RS15180	0.21	-1.7
3,222,855	-		ABCV34_RS15180	0.21	-1.6
3,222,995	+		ABCV34_RS15180	0.28	+0.7
3,222,995	+		ABCV34_RS15180	0.28	-2.6
3,222,996	-		ABCV34_RS15180	0.28	-2.2
3,222,996	-		ABCV34_RS15180	0.28	-2.0
3,222,996	-		ABCV34_RS15180	0.28	-2.1
3,222,996	-		ABCV34_RS15180	0.28	-2.5
3,222,996	-		ABCV34_RS15180	0.28	-2.0
3,222,996	-		ABCV34_RS15180	0.28	-0.0
3,223,183	+		ABCV34_RS15180	0.38	-0.5
3,223,210	+		ABCV34_RS15180	0.39	-0.6
3,223,210	+		ABCV34_RS15180	0.39	-1.0
3,223,210	+		ABCV34_RS15180	0.39	-1.5
3,223,210	+		ABCV34_RS15180	0.39	-0.9
3,223,210	+		ABCV34_RS15180	0.39	+0.2
3,223,210	+		ABCV34_RS15180	0.39	-1.5
3,223,210	+		ABCV34_RS15180	0.39	-1.0
3,223,211	-		ABCV34_RS15180	0.39	-1.9
3,223,211	-		ABCV34_RS15180	0.39	-0.2
3,223,211	-		ABCV34_RS15180	0.39	-2.4
3,223,211	-		ABCV34_RS15180	0.39	-0.9
3,223,211	-		ABCV34_RS15180	0.39	-1.6
3,223,211	-		ABCV34_RS15180	0.39	-1.0
3,223,211	-		ABCV34_RS15180	0.39	-2.0
3,223,214	+		ABCV34_RS15180	0.39	-0.9
3,223,214	+		ABCV34_RS15180	0.39	-0.8
3,223,214	+		ABCV34_RS15180	0.39	-1.1
3,223,214	+		ABCV34_RS15180	0.39	-0.4
3,223,214	+		ABCV34_RS15180	0.39	-2.4
3,223,214	+		ABCV34_RS15180	0.39	-0.6
3,223,214	+		ABCV34_RS15180	0.39	-1.0
3,223,215	-		ABCV34_RS15180	0.40	-1.4
3,223,215	-		ABCV34_RS15180	0.40	-1.4
3,223,215	-		ABCV34_RS15180	0.40	-0.9
3,223,215	-		ABCV34_RS15180	0.40	-0.5
3,223,235	-		ABCV34_RS15180	0.41	-0.9
3,223,235	-		ABCV34_RS15180	0.41	-2.1