Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS10405

Experiment: Anaerobic; Cadmium acetate 1 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; Cadmium acetate 1 uM
2,223,622	+		ABCV34_RS10400	0.67	-1.3
2,223,622	+		ABCV34_RS10400	0.67	-2.4
2,223,622	+		ABCV34_RS10400	0.67	-1.1
2,223,623	-		ABCV34_RS10400	0.67	-1.6
2,223,703	+		ABCV34_RS10400	0.71	-2.2
2,223,704	-		ABCV34_RS10400	0.71	-2.0
2,223,704	-		ABCV34_RS10400	0.71	-1.8
2,223,704	-		ABCV34_RS10400	0.71	-1.5
2,223,704	-		ABCV34_RS10400	0.71	-1.2
2,223,706	+		ABCV34_RS10400	0.71	-2.1
2,223,706	+		ABCV34_RS10400	0.71	-2.1
2,223,706	+		ABCV34_RS10400	0.71	-0.7
2,223,706	+		ABCV34_RS10400	0.71	-1.8
2,223,706	+		ABCV34_RS10400	0.71	-3.4
2,223,706	+		ABCV34_RS10400	0.71	-2.5
2,223,706	+		ABCV34_RS10400	0.71	-1.5
2,223,707	-		ABCV34_RS10400	0.71	-2.2
2,223,707	-		ABCV34_RS10400	0.71	-2.6
2,223,707	-		ABCV34_RS10400	0.71	-1.7
2,223,707	-		ABCV34_RS10400	0.71	-1.1
2,224,045	+		ABCV34_RS10400	0.85	-1.7
2,224,045	+		ABCV34_RS10400	0.85	-2.1
2,224,045	+		ABCV34_RS10400	0.85	-2.7
2,224,045	+		ABCV34_RS10400	0.85	-3.0
2,224,046	-		ABCV34_RS10400	0.85	-0.8
2,224,046	-		ABCV34_RS10400	0.85	-1.5
2,224,046	-		ABCV34_RS10400	0.85	-1.5
2,224,062	-		ABCV34_RS10400	0.86	-1.8
2,224,101	+		ABCV34_RS10400	0.87	-1.4
2,224,101	+		ABCV34_RS10400	0.87	-2.1
2,224,101	+		ABCV34_RS10400	0.87	-1.7
2,224,102	-		ABCV34_RS10400	0.87	-2.1
2,224,168	-				-1.3
2,224,168	-				-2.2
2,224,168	-				-1.6
2,224,168	-				-1.3
2,224,168	-				-1.4
2,224,180	+				-2.0
2,224,181	-				-3.1
2,224,181	-				-2.3
2,224,181	-				-1.6
2,224,181	-				-1.1
2,224,181	-				-1.9
2,224,234	+				-1.9
2,224,234	+				-1.7
2,224,234	+				-1.6
2,224,234	+				-1.9
2,224,235	-				-1.8
2,224,235	-				-3.6
2,224,235	-				-2.2
2,224,297	+				-2.1
2,224,297	+				-1.6
2,224,297	+				-2.7
2,224,297	+				-1.6
2,224,298	-				-2.6
2,224,298	-				-1.9
2,224,372	+				-1.5
2,224,373	-				-2.2
2,224,373	-				-1.1
2,224,373	-				-1.3
2,224,373	-				-0.9
2,224,396	+				-2.1
2,224,396	+				-2.6
2,224,396	+				-3.5
2,224,396	+				-1.8
2,224,397	-				-1.5
2,224,397	-				-2.2
2,224,397	-				-2.1
2,224,397	-				-0.8
2,224,416	+				-1.7
2,224,416	+				-1.8
2,224,416	+				-2.0
2,224,417	-				-1.6
2,224,417	-				-1.5
2,224,417	-				-0.8
2,224,417	-				-2.7
2,224,417	-				-1.1
2,224,584	+				-3.2
2,224,785	+		ABCV34_RS10405	0.18	-1.3
2,224,785	+		ABCV34_RS10405	0.18	-2.1
2,224,785	+		ABCV34_RS10405	0.18	-2.2
2,224,786	-		ABCV34_RS10405	0.18	-1.8
2,224,786	-		ABCV34_RS10405	0.18	-2.6
2,224,786	-		ABCV34_RS10405	0.18	-1.4
2,224,992	+		ABCV34_RS10405	0.28	-1.3
2,224,992	+		ABCV34_RS10405	0.28	-2.9
2,224,993	-		ABCV34_RS10405	0.28	-1.8
2,225,070	+		ABCV34_RS10405	0.32	-2.1
2,225,070	+		ABCV34_RS10405	0.32	-1.1
2,225,070	+		ABCV34_RS10405	0.32	-1.5
2,225,070	+		ABCV34_RS10405	0.32	-1.7
2,225,071	-		ABCV34_RS10405	0.32	-0.9
2,225,071	-		ABCV34_RS10405	0.32	-1.8
2,225,071	-		ABCV34_RS10405	0.32	-2.2
2,225,071	-		ABCV34_RS10405	0.32	-2.5
2,225,071	-		ABCV34_RS10405	0.32	-0.7
2,225,071	-		ABCV34_RS10405	0.32	-1.7
2,225,071	-		ABCV34_RS10405	0.32	-1.5
2,225,071	-		ABCV34_RS10405	0.32	-2.1
2,225,071	-		ABCV34_RS10405	0.32	-2.3
2,225,071	-		ABCV34_RS10405	0.32	-2.1
2,225,071	-		ABCV34_RS10405	0.32	-1.6
2,225,089	-		ABCV34_RS10405	0.33	-0.9
2,225,226	+		ABCV34_RS10405	0.40	-2.3
2,225,365	+		ABCV34_RS10405	0.47	-0.6
2,225,391	+		ABCV34_RS10405	0.48	-2.0
2,225,391	+		ABCV34_RS10405	0.48	-1.8
2,225,391	+		ABCV34_RS10405	0.48	-2.2
2,225,391	+		ABCV34_RS10405	0.48	-1.5
2,225,391	+		ABCV34_RS10405	0.48	-0.9
2,225,391	+		ABCV34_RS10405	0.48	-1.9
2,225,391	+		ABCV34_RS10405	0.48	+0.2
2,225,391	+		ABCV34_RS10405	0.48	-2.5
2,225,392	-		ABCV34_RS10405	0.48	-1.6
2,225,392	-		ABCV34_RS10405	0.48	-2.1
2,225,392	-		ABCV34_RS10405	0.48	-1.4
2,225,392	-		ABCV34_RS10405	0.48	-2.3
2,225,392	-		ABCV34_RS10405	0.48	-1.9
2,225,392	-		ABCV34_RS10405	0.48	-1.8
2,225,392	-		ABCV34_RS10405	0.48	-2.4
2,225,392	-		ABCV34_RS10405	0.48	-2.1
2,225,392	-		ABCV34_RS10405	0.48	-2.2
2,225,392	-		ABCV34_RS10405	0.48	-1.8
2,225,392	-		ABCV34_RS10405	0.48	-1.8
2,225,392	-		ABCV34_RS10405	0.48	-2.7
2,225,392	-		ABCV34_RS10405	0.48	-2.6
2,225,392	-		ABCV34_RS10405	0.48	-1.6
2,225,392	-		ABCV34_RS10405	0.48	-1.4
2,225,392	-		ABCV34_RS10405	0.48	-0.7
2,225,397	+		ABCV34_RS10405	0.48	-2.2
2,225,397	+		ABCV34_RS10405	0.48	-1.2
2,225,397	+		ABCV34_RS10405	0.48	-1.4
2,225,397	+		ABCV34_RS10405	0.48	-4.5
2,225,397	+		ABCV34_RS10405	0.48	-1.4
2,225,398	-		ABCV34_RS10405	0.48	-0.9
2,225,398	-		ABCV34_RS10405	0.48	-1.1
2,225,398	-		ABCV34_RS10405	0.48	-2.8
2,225,398	-		ABCV34_RS10405	0.48	-0.4
2,225,398	-		ABCV34_RS10405	0.48	-1.9
2,225,530	-		ABCV34_RS10405	0.55	-0.1
2,225,530	-		ABCV34_RS10405	0.55	-2.0
2,225,616	+		ABCV34_RS10405	0.59	-1.7
2,225,616	+		ABCV34_RS10405	0.59	-2.6
2,225,616	+		ABCV34_RS10405	0.59	-1.2
2,225,616	+		ABCV34_RS10405	0.59	-1.6
2,225,617	-		ABCV34_RS10405	0.59	-1.6
2,225,617	-		ABCV34_RS10405	0.59	-1.3
2,225,776	+		ABCV34_RS10405	0.67	-2.0
2,225,777	-		ABCV34_RS10405	0.67	-2.7
2,225,779	-		ABCV34_RS10405	0.67	-1.6
2,226,048	+		ABCV34_RS10405	0.80	-2.4
2,226,048	+		ABCV34_RS10405	0.80	-3.6
2,226,049	-		ABCV34_RS10405	0.80	-2.4
2,226,049	-		ABCV34_RS10405	0.80	-2.1
2,226,120	+		ABCV34_RS10405	0.84	-2.4
2,226,120	+		ABCV34_RS10405	0.84	-0.7
2,226,120	+		ABCV34_RS10405	0.84	-2.4
2,226,120	+		ABCV34_RS10405	0.84	-3.1
2,226,120	+		ABCV34_RS10405	0.84	-1.7
2,226,120	+		ABCV34_RS10405	0.84	-1.8
2,226,120	+		ABCV34_RS10405	0.84	-1.7
2,226,121	-		ABCV34_RS10405	0.84	-1.3
2,226,121	-		ABCV34_RS10405	0.84	-2.2
2,226,357	+				-2.5
2,226,358	-				-1.7
2,226,361	-				-1.2
2,226,361	-				-1.8
2,226,413	+				-2.0
2,226,606	+		ABCV34_RS10410	0.11	-0.4
2,226,606	+		ABCV34_RS10410	0.11	-2.4
2,226,606	+		ABCV34_RS10410	0.11	-1.9
2,226,606	+		ABCV34_RS10410	0.11	-1.6
2,226,606	+		ABCV34_RS10410	0.11	-2.2
2,226,606	+		ABCV34_RS10410	0.11	-1.5
2,226,607	-		ABCV34_RS10410	0.11	-2.1
2,226,607	-		ABCV34_RS10410	0.11	-0.2
2,226,607	-		ABCV34_RS10410	0.11	-2.3
2,226,607	-		ABCV34_RS10410	0.11	-2.9
2,226,607	-		ABCV34_RS10410	0.11	-1.7
2,226,607	-		ABCV34_RS10410	0.11	-1.9
2,226,607	-		ABCV34_RS10410	0.11	-1.2
2,226,609	+		ABCV34_RS10410	0.11	-2.8
2,226,609	+		ABCV34_RS10410	0.11	-1.8
2,226,610	-		ABCV34_RS10410	0.12	-2.9
2,226,705	+		ABCV34_RS10410	0.19	-1.6
2,226,759	+		ABCV34_RS10410	0.23	-2.5
2,226,759	+		ABCV34_RS10410	0.23	-1.6
2,226,759	+		ABCV34_RS10410	0.23	-2.0
2,226,759	+		ABCV34_RS10410	0.23	-1.3
2,226,927	+		ABCV34_RS10410	0.35	-1.5
2,226,928	-		ABCV34_RS10410	0.35	-2.0
2,226,928	-		ABCV34_RS10410	0.35	-2.2
2,226,978	+		ABCV34_RS10410	0.39	-2.2
2,226,978	+		ABCV34_RS10410	0.39	-1.6
2,226,978	+		ABCV34_RS10410	0.39	-2.7
2,226,978	+		ABCV34_RS10410	0.39	-1.3
2,226,978	+		ABCV34_RS10410	0.39	-1.7
2,226,979	-		ABCV34_RS10410	0.39	-2.1
2,226,979	-		ABCV34_RS10410	0.39	-1.7
2,226,979	-		ABCV34_RS10410	0.39	-1.7
2,226,979	-		ABCV34_RS10410	0.39	-1.6
2,226,979	-		ABCV34_RS10410	0.39	-1.5
2,226,979	-		ABCV34_RS10410	0.39	-1.8
2,226,979	-		ABCV34_RS10410	0.39	-1.0
2,226,979	-		ABCV34_RS10410	0.39	-1.1
2,226,979	-		ABCV34_RS10410	0.39	-2.5
2,227,125	+		ABCV34_RS10410	0.50	-2.1
2,227,125	+		ABCV34_RS10410	0.50	-1.3
2,227,126	-		ABCV34_RS10410	0.50	-2.0
2,227,126	-		ABCV34_RS10410	0.50	-2.1
2,227,126	-		ABCV34_RS10410	0.50	-2.1
2,227,126	-		ABCV34_RS10410	0.50	-1.1
2,227,126	-		ABCV34_RS10410	0.50	-2.6
2,227,431	+		ABCV34_RS10410	0.73	-1.4
2,227,432	-		ABCV34_RS10410	0.73	-1.8
2,227,432	-		ABCV34_RS10410	0.73	-1.7
2,227,432	-		ABCV34_RS10410	0.73	-2.7