Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS10855

Experiment: Anaerobic; Cadmium acetate 1 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABCV34_RS10850 and ABCV34_RS10855 overlap by 4 nucleotidesABCV34_RS10855 and ABCV34_RS10860 are separated by 9 nucleotidesABCV34_RS10860 and ABCV34_RS10865 are separated by 25 nucleotides ABCV34_RS10850: ABCV34_RS10850 - rod shape-determining protein RodA, at 2,309,021 to 2,310,196 _RS10850 ABCV34_RS10855: ABCV34_RS10855 - penicillin-binding protein 2, at 2,310,193 to 2,312,253 _RS10855 ABCV34_RS10860: ABCV34_RS10860 - rod shape-determining protein MreD, at 2,312,263 to 2,312,784 _RS10860 ABCV34_RS10865: ABCV34_RS10865 - rod shape-determining protein MreC, at 2,312,810 to 2,313,694 _RS10865 Position (kb) 2310 2311 2312 2313Strain fitness (log2 ratio) -1 0 1at 2312.812 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaerobic; Cadmium acetate 1 uM
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2,312,812 - -1.6

Or see this region's nucleotide sequence