Experiment: Anaerobic; Cadmium acetate 1 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABCV34_RS01620 and ABCV34_RS01625 are separated by 2 nucleotides ABCV34_RS01625 and ABCV34_RS01630 are separated by 116 nucleotides ABCV34_RS01630 and ABCV34_RS01635 are separated by 83 nucleotides
ABCV34_RS01620: ABCV34_RS01620 - thermonuclease family protein, at 348,164 to 348,901
_RS01620
ABCV34_RS01625: ABCV34_RS01625 - DUF1178 family protein, at 348,904 to 349,413
_RS01625
ABCV34_RS01630: ABCV34_RS01630 - elongation factor P, at 349,530 to 350,087
_RS01630
ABCV34_RS01635: ABCV34_RS01635 - elongation factor P maturation arginine rhamnosyltransferase EarP, at 350,171 to 351,265
_RS01635
Position (kb) 349
350
351 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 348.630 kb on - strand, within ABCV34_RS01620 at 348.645 kb on - strand, within ABCV34_RS01620 at 348.655 kb on + strand, within ABCV34_RS01620 at 348.655 kb on + strand, within ABCV34_RS01620 at 348.656 kb on - strand, within ABCV34_RS01620 at 348.656 kb on - strand, within ABCV34_RS01620 at 348.656 kb on - strand, within ABCV34_RS01620 at 348.656 kb on - strand, within ABCV34_RS01620 at 348.656 kb on - strand, within ABCV34_RS01620 at 348.656 kb on - strand, within ABCV34_RS01620 at 348.656 kb on - strand, within ABCV34_RS01620 at 348.656 kb on - strand, within ABCV34_RS01620 at 348.749 kb on + strand, within ABCV34_RS01620 at 348.749 kb on + strand, within ABCV34_RS01620 at 348.749 kb on + strand, within ABCV34_RS01620 at 348.750 kb on - strand, within ABCV34_RS01620 at 348.750 kb on - strand, within ABCV34_RS01620 at 348.750 kb on - strand, within ABCV34_RS01620 at 348.750 kb on - strand, within ABCV34_RS01620 at 348.750 kb on - strand, within ABCV34_RS01620 at 348.917 kb on + strand at 348.979 kb on + strand, within ABCV34_RS01625 at 348.979 kb on + strand, within ABCV34_RS01625 at 348.980 kb on - strand, within ABCV34_RS01625 at 348.980 kb on - strand, within ABCV34_RS01625 at 349.424 kb on - strand at 350.172 kb on + strand at 350.172 kb on + strand at 350.173 kb on - strand at 350.173 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic; Cadmium acetate 1 uM remove 348,630 - ABCV34_RS01620 0.63 -3.4 348,645 - ABCV34_RS01620 0.65 -3.4 348,655 + ABCV34_RS01620 0.67 -1.9 348,655 + ABCV34_RS01620 0.67 -1.5 348,656 - ABCV34_RS01620 0.67 -2.3 348,656 - ABCV34_RS01620 0.67 -0.7 348,656 - ABCV34_RS01620 0.67 +0.6 348,656 - ABCV34_RS01620 0.67 -2.5 348,656 - ABCV34_RS01620 0.67 -3.4 348,656 - ABCV34_RS01620 0.67 -1.2 348,656 - ABCV34_RS01620 0.67 -1.9 348,656 - ABCV34_RS01620 0.67 -1.0 348,749 + ABCV34_RS01620 0.79 -1.0 348,749 + ABCV34_RS01620 0.79 -2.7 348,749 + ABCV34_RS01620 0.79 -0.2 348,750 - ABCV34_RS01620 0.79 -2.3 348,750 - ABCV34_RS01620 0.79 -0.6 348,750 - ABCV34_RS01620 0.79 +0.0 348,750 - ABCV34_RS01620 0.79 +1.0 348,750 - ABCV34_RS01620 0.79 -3.5 348,917 + -1.5 348,979 + ABCV34_RS01625 0.15 -2.7 348,979 + ABCV34_RS01625 0.15 -1.4 348,980 - ABCV34_RS01625 0.15 -2.3 348,980 - ABCV34_RS01625 0.15 -2.0 349,424 - -1.0 350,172 + -3.0 350,172 + -2.5 350,173 - -1.4 350,173 - -1.3
Or see this region's nucleotide sequence