Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS08465

Experiment: Anaerobic; Cadmium acetate 1 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; Cadmium acetate 1 uM
1,803,833	+		ABCV34_RS08455	0.72	-2.1
1,803,833	+		ABCV34_RS08455	0.72	-2.4
1,803,833	+		ABCV34_RS08455	0.72	-1.4
1,803,833	+		ABCV34_RS08455	0.72	-1.9
1,803,833	+		ABCV34_RS08455	0.72	-1.7
1,803,833	+		ABCV34_RS08455	0.72	-1.7
1,803,833	+		ABCV34_RS08455	0.72	-1.5
1,803,833	+		ABCV34_RS08455	0.72	-1.3
1,803,833	+		ABCV34_RS08455	0.72	-2.2
1,803,833	+		ABCV34_RS08455	0.72	+0.8
1,803,833	+		ABCV34_RS08455	0.72	-1.1
1,803,833	+		ABCV34_RS08455	0.72	-1.8
1,803,833	+		ABCV34_RS08455	0.72	-1.2
1,803,833	+		ABCV34_RS08455	0.72	-0.0
1,803,834	-		ABCV34_RS08455	0.72	-1.0
1,803,834	-		ABCV34_RS08455	0.72	-1.3
1,803,834	-		ABCV34_RS08455	0.72	-1.7
1,803,834	-		ABCV34_RS08455	0.72	-2.4
1,803,834	-		ABCV34_RS08455	0.72	-1.6
1,803,834	-		ABCV34_RS08455	0.72	-1.5
1,803,834	-		ABCV34_RS08455	0.72	-0.3
1,803,834	-		ABCV34_RS08455	0.72	-1.2
1,803,834	-		ABCV34_RS08455	0.72	-0.5
1,803,834	-		ABCV34_RS08455	0.72	-2.0
1,803,834	-		ABCV34_RS08455	0.72	-1.5
1,803,834	-		ABCV34_RS08455	0.72	-1.2
1,803,866	+		ABCV34_RS08455	0.75	+0.3
1,803,866	+		ABCV34_RS08455	0.75	-1.5
1,803,866	+		ABCV34_RS08455	0.75	-1.3
1,803,867	-		ABCV34_RS08455	0.75	-1.7
1,803,867	-		ABCV34_RS08455	0.75	-2.6
1,803,867	-		ABCV34_RS08455	0.75	-0.6
1,803,867	-		ABCV34_RS08455	0.75	-1.7
1,804,098	-				-0.6
1,804,141	+				-2.0
1,804,141	+				-1.4
1,804,142	-				-1.3
1,804,287	-		ABCV34_RS08460	0.10	-0.8
1,804,543	+		ABCV34_RS08460	0.52	+1.5
1,804,543	+		ABCV34_RS08460	0.52	-0.2
1,804,543	+		ABCV34_RS08460	0.52	-0.9
1,804,543	+		ABCV34_RS08460	0.52	+0.1
1,804,543	+		ABCV34_RS08460	0.52	-0.4
1,804,543	+		ABCV34_RS08460	0.52	-0.0
1,804,544	-		ABCV34_RS08460	0.52	-1.9
1,804,544	-		ABCV34_RS08460	0.52	-1.6
1,804,544	-		ABCV34_RS08460	0.52	-1.5
1,804,544	-		ABCV34_RS08460	0.52	-0.2
1,804,544	-		ABCV34_RS08460	0.52	+2.3
1,804,544	-		ABCV34_RS08460	0.52	-1.0
1,804,906	+		ABCV34_RS08465	0.12	-2.2
1,804,906	+		ABCV34_RS08465	0.12	-3.4
1,804,906	+		ABCV34_RS08465	0.12	-2.7
1,804,907	-		ABCV34_RS08465	0.12	-1.4
1,804,907	-		ABCV34_RS08465	0.12	-3.2
1,804,914	+		ABCV34_RS08465	0.13	-1.7
1,804,914	+		ABCV34_RS08465	0.13	-2.0
1,804,914	+		ABCV34_RS08465	0.13	-1.6
1,804,914	+		ABCV34_RS08465	0.13	-1.0
1,804,914	+		ABCV34_RS08465	0.13	-1.5
1,804,914	+		ABCV34_RS08465	0.13	-2.6
1,804,915	-		ABCV34_RS08465	0.13	-1.7
1,804,915	-		ABCV34_RS08465	0.13	-1.4
1,804,915	-		ABCV34_RS08465	0.13	-2.0
1,804,915	-		ABCV34_RS08465	0.13	-1.4
1,804,915	-		ABCV34_RS08465	0.13	-0.7
1,804,915	-		ABCV34_RS08465	0.13	-2.5
1,805,074	+		ABCV34_RS08465	0.38	-0.7
1,805,074	+		ABCV34_RS08465	0.38	-1.9
1,805,074	+		ABCV34_RS08465	0.38	-2.1
1,805,074	+		ABCV34_RS08465	0.38	-1.3
1,805,074	+		ABCV34_RS08465	0.38	-1.0
1,805,074	+		ABCV34_RS08465	0.38	-2.2
1,805,075	-		ABCV34_RS08465	0.38	-1.4
1,805,075	-		ABCV34_RS08465	0.38	-1.0
1,805,075	-		ABCV34_RS08465	0.38	-1.0
1,805,341	+		ABCV34_RS08465	0.79	-1.4
1,805,341	+		ABCV34_RS08465	0.79	-2.4
1,805,341	+		ABCV34_RS08465	0.79	-2.0
1,805,341	+		ABCV34_RS08465	0.79	-1.8
1,805,342	-		ABCV34_RS08465	0.80	-2.1
1,805,342	-		ABCV34_RS08465	0.80	-1.8
1,805,342	-		ABCV34_RS08465	0.80	-1.2
1,805,342	-		ABCV34_RS08465	0.80	-2.4
1,805,342	-		ABCV34_RS08465	0.80	-2.4
1,805,342	-		ABCV34_RS08465	0.80	-1.0
1,805,383	+		ABCV34_RS08465	0.86	-2.0
1,805,384	-		ABCV34_RS08465	0.86	-0.0
1,805,384	-		ABCV34_RS08465	0.86	-0.7
1,805,384	-		ABCV34_RS08465	0.86	-1.6
1,805,384	-		ABCV34_RS08465	0.86	-1.2
1,805,585	+				-2.4
1,805,585	+				-3.6
1,805,675	+				-1.3
1,805,675	+				-2.0
1,805,675	+				-2.0
1,805,676	-				-3.0
1,805,717	-				-1.5
1,806,044	+		ABCV34_RS08470	0.47	+0.4
1,806,044	+		ABCV34_RS08470	0.47	-2.4
1,806,044	+		ABCV34_RS08470	0.47	-2.6
1,806,045	-		ABCV34_RS08470	0.47	-2.0
1,806,045	-		ABCV34_RS08470	0.47	-2.7
1,806,375	+		ABCV34_RS08470	0.89	-1.5
1,806,375	+		ABCV34_RS08470	0.89	-1.5
1,806,375	+		ABCV34_RS08470	0.89	-1.4
1,806,375	+		ABCV34_RS08470	0.89	-1.8
1,806,376	-		ABCV34_RS08470	0.89	-1.6
1,806,376	-		ABCV34_RS08470	0.89	-2.4
1,806,414	+				-2.2
1,806,414	+				-1.9
1,806,414	+				-2.5
1,806,414	+				-1.5
1,806,414	+				-0.8
1,806,414	+				-1.9
1,806,414	+				-2.2
1,806,415	-				-1.6
1,806,415	-				-3.1
1,806,415	-				-2.2
1,806,415	-				-3.0
1,806,415	-				-3.4
1,806,415	-				-3.0
1,806,415	-				-1.8
1,806,415	-				-2.3
1,806,415	-				-1.7
1,806,415	-				-1.8
1,806,415	-				-1.3
1,806,415	-				-1.6
1,806,415	-				-1.7
1,806,415	-				-2.1