Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS15895

Experiment: Anaerobic; copper (II) chloride 1 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; copper (II) chloride 1 uM
3,359,561	+				-2.5
3,359,561	+				-1.0
3,359,561	+				-2.0
3,359,561	+				-1.6
3,359,561	+				-1.0
3,359,561	+				-2.3
3,359,561	+				-2.3
3,359,561	+				-2.0
3,359,561	+				-3.0
3,359,561	+				-0.3
3,359,561	+				-2.5
3,359,561	+				-0.7
3,359,562	-				-0.8
3,359,562	-				-2.2
3,359,562	-				-2.3
3,359,562	-				-2.3
3,359,692	+		ABCV34_RS15890	0.17	-0.9
3,359,692	+		ABCV34_RS15890	0.17	-2.7
3,359,692	+		ABCV34_RS15890	0.17	-2.4
3,359,692	+		ABCV34_RS15890	0.17	-1.4
3,359,692	+		ABCV34_RS15890	0.17	-2.2
3,359,692	+		ABCV34_RS15890	0.17	-2.1
3,359,692	+		ABCV34_RS15890	0.17	-1.5
3,359,692	+		ABCV34_RS15890	0.17	-1.6
3,359,692	+		ABCV34_RS15890	0.17	-1.8
3,359,692	+		ABCV34_RS15890	0.17	-2.4
3,359,693	-		ABCV34_RS15890	0.17	-1.8
3,359,693	-		ABCV34_RS15890	0.17	-2.1
3,359,693	-		ABCV34_RS15890	0.17	-1.0
3,359,693	-		ABCV34_RS15890	0.17	-0.6
3,359,693	-		ABCV34_RS15890	0.17	-0.8
3,359,693	-		ABCV34_RS15890	0.17	-1.0
3,359,856	+		ABCV34_RS15890	0.36	-1.7
3,359,856	+		ABCV34_RS15890	0.36	-1.8
3,359,857	-		ABCV34_RS15890	0.37	-1.7
3,359,857	-		ABCV34_RS15890	0.37	-3.1
3,359,891	-		ABCV34_RS15890	0.41	-1.0
3,360,013	+		ABCV34_RS15890	0.55	-3.0
3,360,014	-		ABCV34_RS15890	0.56	-0.8
3,360,014	-		ABCV34_RS15890	0.56	-2.5
3,360,127	+		ABCV34_RS15890	0.69	-2.2
3,360,127	+		ABCV34_RS15890	0.69	-1.4
3,360,127	+		ABCV34_RS15890	0.69	-0.0
3,360,127	+		ABCV34_RS15890	0.69	-1.3
3,360,127	+		ABCV34_RS15890	0.69	-1.4
3,360,128	-		ABCV34_RS15890	0.69	-1.8
3,360,128	-		ABCV34_RS15890	0.69	-1.5
3,360,223	-		ABCV34_RS15890	0.81	+1.0
3,360,437	+				-1.6
3,360,437	+				-2.9
3,360,438	-				-2.0
3,360,462	-				-3.7
3,360,474	-				-1.6
3,360,474	-				-0.8
3,360,678	+		ABCV34_RS15895	0.10	-2.1
3,360,678	+		ABCV34_RS15895	0.10	-2.4
3,360,679	-		ABCV34_RS15895	0.10	-1.7
3,360,679	-		ABCV34_RS15895	0.10	-2.3
3,360,753	+		ABCV34_RS15895	0.14	-0.8
3,360,754	-		ABCV34_RS15895	0.14	-1.5
3,360,754	-		ABCV34_RS15895	0.14	-2.1
3,361,062	+		ABCV34_RS15895	0.30	-1.6
3,361,062	+		ABCV34_RS15895	0.30	-1.6
3,361,062	+		ABCV34_RS15895	0.30	-1.8
3,361,062	+		ABCV34_RS15895	0.30	-0.3
3,361,062	+		ABCV34_RS15895	0.30	-1.6
3,361,063	-		ABCV34_RS15895	0.30	-2.0
3,361,174	-		ABCV34_RS15895	0.35	-1.7
3,361,233	+		ABCV34_RS15895	0.38	-1.4
3,361,233	+		ABCV34_RS15895	0.38	-1.5
3,361,233	+		ABCV34_RS15895	0.38	-1.5
3,361,233	+		ABCV34_RS15895	0.38	-2.0
3,361,233	+		ABCV34_RS15895	0.38	-0.3
3,361,233	+		ABCV34_RS15895	0.38	-2.0
3,361,233	+		ABCV34_RS15895	0.38	-1.3
3,361,234	-		ABCV34_RS15895	0.38	-1.6
3,361,234	-		ABCV34_RS15895	0.38	-1.3
3,361,234	-		ABCV34_RS15895	0.38	-1.9
3,361,234	-		ABCV34_RS15895	0.38	-1.4
3,361,255	+		ABCV34_RS15895	0.39	-3.0
3,361,255	+		ABCV34_RS15895	0.39	-0.3
3,361,256	-		ABCV34_RS15895	0.39	-2.2
3,361,256	-		ABCV34_RS15895	0.39	-1.9
3,361,256	-		ABCV34_RS15895	0.39	-2.0
3,361,256	-		ABCV34_RS15895	0.39	-1.7
3,361,256	-		ABCV34_RS15895	0.39	-1.8
3,361,347	+		ABCV34_RS15895	0.44	-1.3
3,361,347	+		ABCV34_RS15895	0.44	-2.0
3,361,347	+		ABCV34_RS15895	0.44	-1.7
3,361,347	+		ABCV34_RS15895	0.44	-2.1
3,361,347	+		ABCV34_RS15895	0.44	-1.9
3,361,347	+		ABCV34_RS15895	0.44	-1.4
3,361,347	+		ABCV34_RS15895	0.44	-1.8
3,361,347	+		ABCV34_RS15895	0.44	-2.3
3,361,347	+		ABCV34_RS15895	0.44	-1.2
3,361,347	+		ABCV34_RS15895	0.44	-2.2
3,361,347	+		ABCV34_RS15895	0.44	-2.4
3,361,347	+		ABCV34_RS15895	0.44	-2.4
3,361,347	+		ABCV34_RS15895	0.44	-2.9
3,361,347	+		ABCV34_RS15895	0.44	-2.7
3,361,348	-		ABCV34_RS15895	0.44	-1.5
3,361,348	-		ABCV34_RS15895	0.44	-2.1
3,361,348	-		ABCV34_RS15895	0.44	-1.3
3,361,348	-		ABCV34_RS15895	0.44	-0.0
3,361,348	-		ABCV34_RS15895	0.44	-1.6
3,361,348	-		ABCV34_RS15895	0.44	-0.0
3,361,348	-		ABCV34_RS15895	0.44	-2.2
3,361,348	-		ABCV34_RS15895	0.44	-1.4
3,361,348	-		ABCV34_RS15895	0.44	-1.6
3,361,348	-		ABCV34_RS15895	0.44	-1.7
3,361,348	-		ABCV34_RS15895	0.44	-1.6
3,361,348	-		ABCV34_RS15895	0.44	-2.1
3,361,348	-		ABCV34_RS15895	0.44	-1.1
3,361,348	-		ABCV34_RS15895	0.44	-3.2
3,361,348	-		ABCV34_RS15895	0.44	-1.2
3,361,348	-		ABCV34_RS15895	0.44	-2.3
3,361,348	-		ABCV34_RS15895	0.44	-2.5
3,361,529	-		ABCV34_RS15895	0.53	-0.9
3,361,569	+		ABCV34_RS15895	0.55	-1.5
3,361,570	-		ABCV34_RS15895	0.55	-2.2
3,361,570	-		ABCV34_RS15895	0.55	-0.7
3,361,648	+		ABCV34_RS15895	0.59	-1.5
3,361,648	+		ABCV34_RS15895	0.59	-0.5
3,361,649	-		ABCV34_RS15895	0.59	-1.8
3,361,649	-		ABCV34_RS15895	0.59	-0.7
3,361,649	-		ABCV34_RS15895	0.59	-1.9
3,361,706	-		ABCV34_RS15895	0.62	-1.5
3,361,706	-		ABCV34_RS15895	0.62	-1.2
3,361,890	+		ABCV34_RS15895	0.71	-1.7
3,361,996	+		ABCV34_RS15895	0.76	-1.6
3,361,996	+		ABCV34_RS15895	0.76	-2.3
3,361,996	+		ABCV34_RS15895	0.76	-2.0
3,361,996	+		ABCV34_RS15895	0.76	-1.8
3,361,996	+		ABCV34_RS15895	0.76	-1.6
3,361,996	+		ABCV34_RS15895	0.76	-1.2
3,361,997	-		ABCV34_RS15895	0.76	-1.8
3,361,997	-		ABCV34_RS15895	0.76	-3.2
3,361,997	-		ABCV34_RS15895	0.76	-1.8
3,361,997	-		ABCV34_RS15895	0.76	-0.6
3,361,997	-		ABCV34_RS15895	0.76	-4.1
3,361,997	-		ABCV34_RS15895	0.76	-2.4
3,361,997	-		ABCV34_RS15895	0.76	-2.3
3,362,020	+		ABCV34_RS15895	0.77	-1.8
3,362,021	-		ABCV34_RS15895	0.77	-1.8
3,362,214	+		ABCV34_RS15895	0.87	-2.2
3,362,214	+		ABCV34_RS15895	0.87	-1.7
3,362,215	-		ABCV34_RS15895	0.87	-1.5
3,362,416	+				-2.1
3,362,483	+				-1.1
3,362,483	+				-1.4
3,362,483	+				-1.8
3,362,483	+				-1.8
3,362,484	-				-1.5
3,362,484	-				-2.3
3,362,484	-				-2.4
3,362,484	-				-2.0
3,362,484	-				-2.1
3,362,484	-				-1.9
3,362,484	-				-1.8
3,362,484	-				-2.5
3,362,484	-				-1.0
3,362,484	-				-1.4
3,362,484	-				-2.4
3,362,486	+				-1.9
3,362,486	+				-0.7
3,362,486	+				-2.3
3,362,487	-				-1.9
3,362,487	-				-2.4
3,362,487	-				-3.3
3,362,487	-				-1.7
3,362,532	+				-3.3
3,362,532	+				-1.4
3,362,683	+				-1.8
3,362,683	+				-0.9
3,362,683	+				-0.0
3,362,683	+				-0.0
3,362,684	-				-2.4
3,362,684	-				-2.0
3,362,684	-				-1.5
3,362,684	-				-2.2
3,362,866	+				-1.2
3,362,866	+				-0.7
3,362,867	-				-1.1
3,362,867	-				-1.9
3,362,869	+				-1.6
3,362,869	+				-0.2
3,362,869	+				-1.6
3,362,869	+				-3.3
3,362,869	+				-0.8
3,362,870	-				-1.9
3,362,901	+				-0.6
3,363,255	+				-3.4
3,363,255	+				-1.3
3,363,255	+				-2.1
3,363,256	-				-2.2
3,363,256	-				-2.2
3,363,445	+		ABCV34_RS15900	0.63	-1.8
3,363,446	-		ABCV34_RS15900	0.63	-1.2
3,363,446	-		ABCV34_RS15900	0.63	-3.2
3,363,446	-		ABCV34_RS15900	0.63	-1.8
3,363,446	-		ABCV34_RS15900	0.63	-2.7