Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS12905

Experiment: Anaerobic; copper (II) chloride 1 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; copper (II) chloride 1 uM
2,734,168	-		ABCV34_RS12900	0.60	-1.2
2,734,441	+		ABCV34_RS12900	0.72	-1.2
2,734,441	+		ABCV34_RS12900	0.72	-2.0
2,734,442	-		ABCV34_RS12900	0.72	-1.5
2,734,442	-		ABCV34_RS12900	0.72	-2.2
2,734,442	-		ABCV34_RS12900	0.72	-0.2
2,734,442	-		ABCV34_RS12900	0.72	-3.5
2,734,442	-		ABCV34_RS12900	0.72	-1.3
2,734,442	-		ABCV34_RS12900	0.72	+0.0
2,734,442	-		ABCV34_RS12900	0.72	-1.3
2,734,559	+		ABCV34_RS12900	0.77	-2.2
2,734,559	+		ABCV34_RS12900	0.77	-1.3
2,734,560	-		ABCV34_RS12900	0.78	-0.8
2,734,560	-		ABCV34_RS12900	0.78	-1.9
2,734,560	-		ABCV34_RS12900	0.78	-1.6
2,734,560	-		ABCV34_RS12900	0.78	-1.2
2,734,741	-		ABCV34_RS12900	0.86	-1.4
2,734,832	+		ABCV34_RS12900	0.90	-1.7
2,734,969	+				-2.0
2,734,969	+				-2.4
2,734,969	+				-0.9
2,734,970	-				-1.7
2,734,970	-				-1.5
2,734,970	-				-1.3
2,734,970	-				-1.7
2,734,970	-				-1.5
2,734,970	-				-2.4
2,734,971	+				-1.6
2,734,981	+				-2.4
2,734,982	-				-0.9
2,735,053	-				-1.1
2,735,059	+				-1.5
2,735,059	+				-1.4
2,735,059	+				-0.9
2,735,059	+				-1.2
2,735,059	+				-1.2
2,735,060	-				-1.2
2,735,060	-				-1.2
2,735,060	-				-2.1
2,735,060	-				-2.3
2,735,060	-				-2.3
2,735,123	+				-2.3
2,735,123	+				-1.5
2,735,124	-				-1.4
2,735,124	-				-1.9
2,735,124	-				-2.2
2,735,124	-				-1.3
2,735,197	+				-1.3
2,735,197	+				-1.8
2,735,198	-				-1.1
2,735,198	-				-0.9
2,735,306	+		ABCV34_RS12905	0.15	-0.7
2,735,307	-		ABCV34_RS12905	0.15	-1.7
2,735,307	-		ABCV34_RS12905	0.15	-1.5
2,735,471	+		ABCV34_RS12905	0.28	-1.4
2,735,471	+		ABCV34_RS12905	0.28	-0.6
2,735,471	+		ABCV34_RS12905	0.28	-0.8
2,735,471	+		ABCV34_RS12905	0.28	-0.8
2,735,472	-		ABCV34_RS12905	0.28	-1.2
2,735,472	-		ABCV34_RS12905	0.28	-0.3
2,735,472	-		ABCV34_RS12905	0.28	-0.2
2,735,472	-		ABCV34_RS12905	0.28	-2.2
2,735,472	-		ABCV34_RS12905	0.28	+1.4
2,735,472	-		ABCV34_RS12905	0.28	-2.3
2,735,573	+		ABCV34_RS12905	0.36	-2.3
2,735,573	+		ABCV34_RS12905	0.36	-1.8
2,735,573	+		ABCV34_RS12905	0.36	-1.4
2,735,573	+		ABCV34_RS12905	0.36	-0.3
2,735,573	+		ABCV34_RS12905	0.36	-1.2
2,735,574	-		ABCV34_RS12905	0.36	-2.5
2,735,574	-		ABCV34_RS12905	0.36	-0.7
2,735,574	-		ABCV34_RS12905	0.36	-1.7
2,735,574	-		ABCV34_RS12905	0.36	-0.2
2,735,680	+		ABCV34_RS12905	0.44	-0.2
2,735,680	+		ABCV34_RS12905	0.44	-0.2
2,735,680	+		ABCV34_RS12905	0.44	+0.8
2,735,681	-		ABCV34_RS12905	0.45	+0.1
2,735,681	-		ABCV34_RS12905	0.45	-1.1
2,735,681	-		ABCV34_RS12905	0.45	-0.3
2,735,681	-		ABCV34_RS12905	0.45	-0.5
2,735,789	+		ABCV34_RS12905	0.53	+2.4
2,735,789	+		ABCV34_RS12905	0.53	+0.3
2,735,789	+		ABCV34_RS12905	0.53	-1.2
2,735,789	+		ABCV34_RS12905	0.53	-0.3
2,735,789	+		ABCV34_RS12905	0.53	-1.4
2,735,789	+		ABCV34_RS12905	0.53	-1.2
2,735,789	+		ABCV34_RS12905	0.53	-0.7
2,735,789	+		ABCV34_RS12905	0.53	-0.6
2,735,789	+		ABCV34_RS12905	0.53	-0.2
2,735,789	+		ABCV34_RS12905	0.53	-0.6
2,735,789	+		ABCV34_RS12905	0.53	-1.3
2,735,789	+		ABCV34_RS12905	0.53	-0.2
2,735,789	+		ABCV34_RS12905	0.53	-0.9
2,735,789	+		ABCV34_RS12905	0.53	-0.5
2,735,789	+		ABCV34_RS12905	0.53	+1.1
2,735,789	+		ABCV34_RS12905	0.53	-1.8
2,735,789	+		ABCV34_RS12905	0.53	-2.2
2,735,789	+		ABCV34_RS12905	0.53	-1.2
2,735,789	+		ABCV34_RS12905	0.53	-1.2
2,735,789	+		ABCV34_RS12905	0.53	-1.4
2,735,789	+		ABCV34_RS12905	0.53	-1.0
2,735,790	-		ABCV34_RS12905	0.53	-0.6
2,735,790	-		ABCV34_RS12905	0.53	-1.6
2,735,790	-		ABCV34_RS12905	0.53	-1.4
2,735,790	-		ABCV34_RS12905	0.53	-0.4
2,735,790	-		ABCV34_RS12905	0.53	-0.8
2,735,790	-		ABCV34_RS12905	0.53	-1.6
2,735,790	-		ABCV34_RS12905	0.53	-0.2
2,735,790	-		ABCV34_RS12905	0.53	-1.6
2,735,790	-		ABCV34_RS12905	0.53	-1.1
2,735,790	-		ABCV34_RS12905	0.53	-0.4
2,735,790	-		ABCV34_RS12905	0.53	-0.2
2,735,790	-		ABCV34_RS12905	0.53	-1.2
2,735,790	-		ABCV34_RS12905	0.53	+0.2
2,735,790	-		ABCV34_RS12905	0.53	-0.6
2,735,790	-		ABCV34_RS12905	0.53	-0.6
2,735,790	-		ABCV34_RS12905	0.53	-0.7
2,735,790	-		ABCV34_RS12905	0.53	-0.4
2,735,790	-		ABCV34_RS12905	0.53	-0.2
2,735,790	-		ABCV34_RS12905	0.53	-1.2
2,735,974	+		ABCV34_RS12905	0.68	-1.2
2,736,098	+		ABCV34_RS12905	0.78	+0.3
2,736,098	+		ABCV34_RS12905	0.78	-0.7
2,736,098	+		ABCV34_RS12905	0.78	-0.7
2,736,098	+		ABCV34_RS12905	0.78	-0.5
2,736,098	+		ABCV34_RS12905	0.78	-0.6
2,736,099	-		ABCV34_RS12905	0.78	-0.4
2,736,099	-		ABCV34_RS12905	0.78	-0.6
2,736,099	-		ABCV34_RS12905	0.78	-0.5
2,736,099	-		ABCV34_RS12905	0.78	-0.9
2,736,099	-		ABCV34_RS12905	0.78	-0.6
2,736,099	-		ABCV34_RS12905	0.78	-1.5
2,736,279	-				-2.4
2,736,286	-				-1.0
2,736,289	+				-2.0
2,736,382	+				-1.6
2,736,382	+				-1.6
2,736,383	-				-1.5
2,736,383	-				-1.5
2,736,383	-				-2.2
2,736,417	+				-1.3
2,736,418	-				-1.6
2,736,418	-				-1.5
2,736,418	-				-0.9
2,736,418	-				-1.7
2,736,418	-				-2.3
2,736,418	-				-1.7
2,736,465	+				-2.1
2,736,465	+				-1.2
2,736,465	+				-1.7
2,736,515	+				-1.7
2,736,516	-				-1.7
2,736,516	-				-1.3
2,736,516	-				-1.8
2,736,516	-				-2.0
2,736,519	+				-1.6
2,736,519	+				-1.7
2,736,519	+				-1.5
2,736,519	+				-1.8
2,736,519	+				-1.1
2,736,520	-				-3.2
2,736,520	-				-1.7
2,736,520	-				-1.0
2,736,520	-				-2.3
2,736,651	+				-1.8
2,736,651	+				-1.5
2,736,652	-				-1.8
2,736,652	-				-1.9
2,736,706	+				-1.1
2,736,707	-				-1.2
2,736,718	+				-0.6
2,736,718	+				-0.5
2,736,765	+				-1.4
2,736,775	+				-1.0
2,736,776	-				-1.2
2,736,795	+				-1.9
2,736,795	+				-2.2
2,736,795	+				-1.2
2,736,798	+				-0.7
2,736,798	+				-2.0
2,736,798	+				-1.5
2,736,799	-				+0.3
2,736,818	+				-2.2
2,736,818	+				-1.9
2,736,818	+				-1.4
2,736,818	+				+0.2
2,736,818	+				-2.0
2,736,818	+				-2.4
2,736,818	+				-1.4
2,736,818	+				-1.5
2,736,818	+				-1.6
2,736,818	+				-1.9
2,736,818	+				-1.5
2,736,818	+				-1.5
2,736,818	+				-1.7
2,736,818	+				-1.9
2,736,818	+				-1.5
2,736,818	+				-0.8
2,736,818	+				-0.5
2,736,818	+				-1.6
2,736,819	-				-1.0
2,736,819	-				-1.9
2,736,819	-				-1.6
2,736,819	-				-1.2
2,736,819	-				-0.4
2,736,819	-				-3.3
2,736,819	-				-3.7
2,736,819	-				+0.4
2,736,819	-				-0.7
2,736,819	-				-1.7
2,736,819	-				-2.1
2,736,819	-				-1.6
2,736,819	-				-0.6
2,736,819	-				-1.2
2,736,819	-				+0.4
2,736,819	-				-0.5
2,736,819	-				-1.2
2,736,819	-				-1.0
2,736,819	-				-0.7
2,736,819	-				-1.2
2,736,819	-				-1.4
2,736,819	-				-0.2
2,736,908	+		ABCV34_RS12910	0.18	-0.9
2,737,013	+		ABCV34_RS12910	0.44	-1.6
2,737,013	+		ABCV34_RS12910	0.44	-1.6
2,737,013	+		ABCV34_RS12910	0.44	-2.8
2,737,013	+		ABCV34_RS12910	0.44	-2.2
2,737,013	+		ABCV34_RS12910	0.44	-1.7
2,737,013	+		ABCV34_RS12910	0.44	-1.7
2,737,013	+		ABCV34_RS12910	0.44	-1.4
2,737,013	+		ABCV34_RS12910	0.44	-1.1
2,737,013	+		ABCV34_RS12910	0.44	-1.7
2,737,013	+		ABCV34_RS12910	0.44	-1.6
2,737,013	+		ABCV34_RS12910	0.44	-1.9
2,737,013	+		ABCV34_RS12910	0.44	-0.2
2,737,013	+		ABCV34_RS12910	0.44	-1.5
2,737,013	+		ABCV34_RS12910	0.44	-1.5
2,737,013	+		ABCV34_RS12910	0.44	-1.6
2,737,014	-		ABCV34_RS12910	0.44	-0.2
2,737,014	-		ABCV34_RS12910	0.44	-1.2
2,737,014	-		ABCV34_RS12910	0.44	-0.2
2,737,014	-		ABCV34_RS12910	0.44	-1.2
2,737,014	-		ABCV34_RS12910	0.44	-1.7
2,737,014	-		ABCV34_RS12910	0.44	-0.2
2,737,014	-		ABCV34_RS12910	0.44	-1.7
2,737,072	+		ABCV34_RS12910	0.58	-1.3
2,737,072	+		ABCV34_RS12910	0.58	-1.9
2,737,072	+		ABCV34_RS12910	0.58	-1.5
2,737,072	+		ABCV34_RS12910	0.58	-1.4
2,737,072	+		ABCV34_RS12910	0.58	-1.4
2,737,094	+		ABCV34_RS12910	0.64	-1.2
2,737,095	-		ABCV34_RS12910	0.64	-0.2
2,737,110	+		ABCV34_RS12910	0.68	-1.6
2,737,145	+		ABCV34_RS12910	0.76	-2.1
2,737,145	+		ABCV34_RS12910	0.76	-1.6
2,737,145	+		ABCV34_RS12910	0.76	-1.6
2,737,145	+		ABCV34_RS12910	0.76	-1.2
2,737,145	+		ABCV34_RS12910	0.76	-1.7
2,737,145	+		ABCV34_RS12910	0.76	-2.5
2,737,169	+		ABCV34_RS12910	0.82	-1.7
2,737,169	+		ABCV34_RS12910	0.82	-0.2
2,737,169	+		ABCV34_RS12910	0.82	-0.2
2,737,169	+		ABCV34_RS12910	0.82	-2.3
2,737,169	+		ABCV34_RS12910	0.82	-3.2
2,737,169	+		ABCV34_RS12910	0.82	-1.3
2,737,169	+		ABCV34_RS12910	0.82	-2.0
2,737,170	-		ABCV34_RS12910	0.82	-0.2
2,737,170	-		ABCV34_RS12910	0.82	-0.2
2,737,170	-		ABCV34_RS12910	0.82	-1.2
2,737,200	+				-1.7
2,737,200	+				-1.8
2,737,200	+				-0.7
2,737,264	+				-0.6
2,737,268	+				-1.2
2,737,268	+				-3.6
2,737,268	+				-1.2
2,737,300	+				-2.0