Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS10140

Experiment: Anaerobic; copper (II) chloride 1 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; copper (II) chloride 1 uM
2,171,310	+				-1.2
2,171,310	+				-0.5
2,171,310	+				-2.1
2,171,310	+				-1.9
2,171,310	+				-1.7
2,171,310	+				-0.5
2,171,310	+				-1.4
2,171,310	+				-1.1
2,171,310	+				-0.9
2,171,310	+				-0.8
2,171,310	+				-1.1
2,171,310	+				-2.7
2,171,310	+				-1.6
2,171,311	-				-1.6
2,171,311	-				-0.5
2,171,311	-				-3.5
2,171,311	-				-1.0
2,171,311	-				-1.5
2,171,311	-				-1.3
2,171,311	-				-2.7
2,171,311	-				-1.1
2,171,311	-				-1.4
2,171,311	-				-1.6
2,171,311	-				-0.8
2,171,311	-				-1.6
2,171,317	+				-1.3
2,171,317	+				-1.9
2,171,317	+				-1.1
2,171,317	+				-1.6
2,171,318	-				-1.7
2,171,318	-				-1.3
2,171,318	-				-1.6
2,171,318	-				-0.7
2,171,318	-				-1.6
2,171,393	+				-1.1
2,171,393	+				-2.6
2,171,393	+				-2.6
2,171,393	+				-2.3
2,171,393	+				-3.3
2,171,394	-				-2.4
2,171,394	-				-0.8
2,171,398	+				-2.9
2,171,398	+				-1.7
2,171,398	+				-2.1
2,171,398	+				+0.5
2,171,399	-				-2.2
2,171,405	+				-3.0
2,171,406	-				+1.9
2,171,638	+		ABCV34_RS10145	0.42	-2.3
2,171,638	+		ABCV34_RS10145	0.42	-1.1
2,171,638	+		ABCV34_RS10145	0.42	-2.1
2,171,639	-		ABCV34_RS10145	0.42	-1.8
2,171,639	-		ABCV34_RS10145	0.42	-0.7
2,171,639	-		ABCV34_RS10145	0.42	-2.1
2,171,704	-		ABCV34_RS10145	0.53	-2.9
2,171,704	-		ABCV34_RS10145	0.53	-2.5
2,171,826	+		ABCV34_RS10145	0.72	-2.1
2,171,827	-		ABCV34_RS10145	0.72	-1.7
2,171,827	-		ABCV34_RS10145	0.72	-2.1
2,171,908	-		ABCV34_RS10145	0.85	-2.7
2,171,917	+		ABCV34_RS10145	0.86	-1.8
2,171,918	-		ABCV34_RS10145	0.87	-3.7
2,171,918	-		ABCV34_RS10145	0.87	-1.7
2,171,945	+				-2.2
2,171,945	+				-1.3
2,171,946	-				-2.7
2,171,946	-				-1.9
2,171,946	-				-0.9
2,171,948	+				-0.7
2,171,948	+				-1.4
2,171,948	+				-1.3
2,171,949	-				-2.4
2,171,949	-				-2.2
2,171,949	-				-3.1
2,171,949	-				-1.0