Experiment: Anaerobic; ammonium iron(II) sulfate 10 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABCV34_RS07665 and ABCV34_RS07670 are separated by 4 nucleotides ABCV34_RS07670 and ABCV34_RS07675 are separated by 89 nucleotides ABCV34_RS07675 and ABCV34_RS07680 are separated by 236 nucleotides ABCV34_RS07680 and ABCV34_RS07685 are separated by 303 nucleotides
ABCV34_RS07665: ABCV34_RS07665 - type II toxin-antitoxin system RelE/ParE family toxin, at 1,644,121 to 1,644,441
_RS07665
ABCV34_RS07670: ABCV34_RS07670 - addiction module antitoxin, at 1,644,446 to 1,644,706
_RS07670
ABCV34_RS07675: ABCV34_RS07675 - Arm DNA-binding domain-containing protein, at 1,644,796 to 1,644,957
_RS07675
ABCV34_RS07680: ABCV34_RS07680 - tRNA-Gly, at 1,645,194 to 1,645,269
_RS07680
ABCV34_RS07685: ABCV34_RS07685 - sulfite exporter TauE/SafE family protein, at 1,645,573 to 1,646,322
_RS07685
Position (kb) 1645
1646 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1644.218 kb on + strand, within ABCV34_RS07665 at 1644.218 kb on + strand, within ABCV34_RS07665 at 1644.219 kb on - strand, within ABCV34_RS07665 at 1644.219 kb on - strand, within ABCV34_RS07665 at 1644.219 kb on - strand, within ABCV34_RS07665 at 1644.249 kb on - strand, within ABCV34_RS07665 at 1644.336 kb on + strand, within ABCV34_RS07665 at 1644.336 kb on + strand, within ABCV34_RS07665 at 1644.336 kb on + strand, within ABCV34_RS07665 at 1644.336 kb on + strand, within ABCV34_RS07665 at 1644.336 kb on + strand, within ABCV34_RS07665 at 1644.337 kb on - strand, within ABCV34_RS07665 at 1644.337 kb on - strand, within ABCV34_RS07665 at 1644.337 kb on - strand, within ABCV34_RS07665 at 1644.337 kb on - strand, within ABCV34_RS07665 at 1644.337 kb on - strand, within ABCV34_RS07665 at 1644.337 kb on - strand, within ABCV34_RS07665 at 1644.337 kb on - strand, within ABCV34_RS07665 at 1644.338 kb on + strand, within ABCV34_RS07665 at 1644.338 kb on + strand, within ABCV34_RS07665 at 1644.338 kb on + strand, within ABCV34_RS07665 at 1644.338 kb on + strand, within ABCV34_RS07665 at 1644.339 kb on - strand, within ABCV34_RS07665 at 1644.339 kb on - strand, within ABCV34_RS07665 at 1644.339 kb on - strand, within ABCV34_RS07665 at 1644.339 kb on - strand, within ABCV34_RS07665 at 1644.339 kb on - strand, within ABCV34_RS07665 at 1644.339 kb on - strand, within ABCV34_RS07665 at 1644.378 kb on - strand, within ABCV34_RS07665 at 1644.383 kb on + strand, within ABCV34_RS07665 at 1644.383 kb on + strand, within ABCV34_RS07665 at 1644.383 kb on + strand, within ABCV34_RS07665 at 1644.383 kb on + strand, within ABCV34_RS07665 at 1644.383 kb on + strand, within ABCV34_RS07665 at 1644.383 kb on + strand, within ABCV34_RS07665 at 1644.383 kb on + strand, within ABCV34_RS07665 at 1644.384 kb on - strand, within ABCV34_RS07665 at 1644.384 kb on - strand, within ABCV34_RS07665 at 1644.384 kb on - strand, within ABCV34_RS07665 at 1644.384 kb on - strand, within ABCV34_RS07665 at 1644.384 kb on - strand, within ABCV34_RS07665 at 1644.430 kb on + strand at 1644.430 kb on + strand at 1644.431 kb on - strand at 1644.431 kb on - strand at 1644.492 kb on + strand, within ABCV34_RS07670 at 1644.492 kb on + strand, within ABCV34_RS07670 at 1644.492 kb on + strand, within ABCV34_RS07670 at 1644.492 kb on + strand, within ABCV34_RS07670 at 1644.493 kb on - strand, within ABCV34_RS07670 at 1644.513 kb on + strand, within ABCV34_RS07670 at 1644.593 kb on + strand, within ABCV34_RS07670 at 1644.593 kb on + strand, within ABCV34_RS07670 at 1644.593 kb on + strand, within ABCV34_RS07670 at 1644.594 kb on - strand, within ABCV34_RS07670 at 1644.594 kb on - strand, within ABCV34_RS07670 at 1644.597 kb on + strand, within ABCV34_RS07670 at 1644.597 kb on + strand, within ABCV34_RS07670 at 1644.597 kb on + strand, within ABCV34_RS07670 at 1644.700 kb on + strand at 1644.700 kb on + strand at 1644.700 kb on + strand at 1644.736 kb on + strand at 1644.737 kb on - strand at 1644.738 kb on + strand at 1644.739 kb on - strand at 1644.743 kb on - strand at 1644.752 kb on + strand at 1644.788 kb on + strand at 1644.788 kb on + strand at 1644.788 kb on + strand at 1644.788 kb on + strand at 1644.788 kb on + strand at 1644.788 kb on + strand at 1644.788 kb on + strand at 1644.788 kb on + strand at 1644.789 kb on - strand at 1644.789 kb on - strand at 1644.789 kb on - strand at 1644.789 kb on - strand at 1644.789 kb on - strand at 1644.789 kb on - strand at 1644.830 kb on + strand, within ABCV34_RS07675 at 1644.830 kb on + strand, within ABCV34_RS07675 at 1644.830 kb on + strand, within ABCV34_RS07675 at 1644.831 kb on - strand, within ABCV34_RS07675 at 1644.831 kb on - strand, within ABCV34_RS07675 at 1644.831 kb on - strand, within ABCV34_RS07675 at 1644.834 kb on - strand, within ABCV34_RS07675 at 1644.905 kb on + strand, within ABCV34_RS07675 at 1644.906 kb on - strand, within ABCV34_RS07675 at 1644.948 kb on + strand at 1644.995 kb on + strand at 1644.995 kb on + strand at 1644.995 kb on + strand at 1644.995 kb on + strand at 1644.995 kb on + strand at 1644.995 kb on + strand at 1644.996 kb on - strand at 1644.996 kb on - strand at 1644.996 kb on - strand at 1645.069 kb on + strand at 1645.069 kb on + strand at 1645.069 kb on + strand at 1645.069 kb on + strand at 1645.069 kb on + strand at 1645.070 kb on - strand at 1645.070 kb on - strand at 1645.070 kb on - strand at 1645.070 kb on - strand at 1645.098 kb on + strand at 1645.159 kb on + strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.160 kb on - strand at 1645.407 kb on - strand at 1645.407 kb on - strand at 1645.407 kb on - strand at 1645.407 kb on - strand at 1645.407 kb on - strand at 1645.409 kb on - strand at 1645.409 kb on - strand at 1645.460 kb on + strand at 1645.460 kb on + strand at 1645.461 kb on - strand at 1645.461 kb on - strand at 1645.461 kb on - strand at 1645.461 kb on - strand at 1645.461 kb on - strand at 1645.519 kb on - strand at 1645.519 kb on - strand at 1645.519 kb on - strand at 1645.682 kb on + strand, within ABCV34_RS07685 at 1645.683 kb on - strand, within ABCV34_RS07685 at 1645.889 kb on + strand, within ABCV34_RS07685 at 1645.889 kb on + strand, within ABCV34_RS07685 at 1645.889 kb on + strand, within ABCV34_RS07685 at 1645.889 kb on + strand, within ABCV34_RS07685 at 1645.889 kb on + strand, within ABCV34_RS07685 at 1645.889 kb on + strand, within ABCV34_RS07685 at 1645.890 kb on - strand, within ABCV34_RS07685 at 1646.043 kb on + strand, within ABCV34_RS07685 at 1646.043 kb on + strand, within ABCV34_RS07685 at 1646.043 kb on + strand, within ABCV34_RS07685 at 1646.044 kb on - strand, within ABCV34_RS07685 at 1646.141 kb on + strand, within ABCV34_RS07685 at 1646.142 kb on - strand, within ABCV34_RS07685 at 1646.171 kb on + strand, within ABCV34_RS07685
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic; ammonium iron(II) sulfate 10 uM remove 1,644,218 + ABCV34_RS07665 0.30 -2.1 1,644,218 + ABCV34_RS07665 0.30 -1.4 1,644,219 - ABCV34_RS07665 0.31 -0.6 1,644,219 - ABCV34_RS07665 0.31 -1.9 1,644,219 - ABCV34_RS07665 0.31 -1.4 1,644,249 - ABCV34_RS07665 0.40 -1.8 1,644,336 + ABCV34_RS07665 0.67 -2.4 1,644,336 + ABCV34_RS07665 0.67 -1.8 1,644,336 + ABCV34_RS07665 0.67 -4.1 1,644,336 + ABCV34_RS07665 0.67 -2.1 1,644,336 + ABCV34_RS07665 0.67 -2.0 1,644,337 - ABCV34_RS07665 0.67 -1.1 1,644,337 - ABCV34_RS07665 0.67 -1.9 1,644,337 - ABCV34_RS07665 0.67 -2.8 1,644,337 - ABCV34_RS07665 0.67 -1.9 1,644,337 - ABCV34_RS07665 0.67 -2.1 1,644,337 - ABCV34_RS07665 0.67 -0.9 1,644,337 - ABCV34_RS07665 0.67 -2.3 1,644,338 + ABCV34_RS07665 0.68 -1.0 1,644,338 + ABCV34_RS07665 0.68 -1.9 1,644,338 + ABCV34_RS07665 0.68 -2.8 1,644,338 + ABCV34_RS07665 0.68 -0.1 1,644,339 - ABCV34_RS07665 0.68 -1.8 1,644,339 - ABCV34_RS07665 0.68 -2.0 1,644,339 - ABCV34_RS07665 0.68 -2.1 1,644,339 - ABCV34_RS07665 0.68 -2.3 1,644,339 - ABCV34_RS07665 0.68 -1.5 1,644,339 - ABCV34_RS07665 0.68 -2.1 1,644,378 - ABCV34_RS07665 0.80 -1.7 1,644,383 + ABCV34_RS07665 0.82 -2.1 1,644,383 + ABCV34_RS07665 0.82 -1.3 1,644,383 + ABCV34_RS07665 0.82 -2.4 1,644,383 + ABCV34_RS07665 0.82 +0.2 1,644,383 + ABCV34_RS07665 0.82 -2.2 1,644,383 + ABCV34_RS07665 0.82 -2.6 1,644,383 + ABCV34_RS07665 0.82 -1.6 1,644,384 - ABCV34_RS07665 0.82 -2.1 1,644,384 - ABCV34_RS07665 0.82 -3.4 1,644,384 - ABCV34_RS07665 0.82 -1.6 1,644,384 - ABCV34_RS07665 0.82 -2.1 1,644,384 - ABCV34_RS07665 0.82 -1.4 1,644,430 + +0.3 1,644,430 + -2.4 1,644,431 - -2.4 1,644,431 - -0.9 1,644,492 + ABCV34_RS07670 0.18 -2.4 1,644,492 + ABCV34_RS07670 0.18 -2.1 1,644,492 + ABCV34_RS07670 0.18 -0.1 1,644,492 + ABCV34_RS07670 0.18 -2.0 1,644,493 - ABCV34_RS07670 0.18 -2.2 1,644,513 + ABCV34_RS07670 0.26 -0.4 1,644,593 + ABCV34_RS07670 0.56 -2.3 1,644,593 + ABCV34_RS07670 0.56 -3.4 1,644,593 + ABCV34_RS07670 0.56 -1.9 1,644,594 - ABCV34_RS07670 0.57 -1.3 1,644,594 - ABCV34_RS07670 0.57 -2.6 1,644,597 + ABCV34_RS07670 0.58 -2.9 1,644,597 + ABCV34_RS07670 0.58 -2.1 1,644,597 + ABCV34_RS07670 0.58 -2.4 1,644,700 + -1.1 1,644,700 + -2.0 1,644,700 + -3.9 1,644,736 + -2.1 1,644,737 - -1.9 1,644,738 + -1.9 1,644,739 - -1.4 1,644,743 - -2.9 1,644,752 + -3.4 1,644,788 + -2.4 1,644,788 + -1.2 1,644,788 + -2.6 1,644,788 + -1.1 1,644,788 + -1.0 1,644,788 + -2.1 1,644,788 + -2.4 1,644,788 + -1.6 1,644,789 - -2.4 1,644,789 - -1.5 1,644,789 - -3.7 1,644,789 - -2.5 1,644,789 - -3.3 1,644,789 - -1.8 1,644,830 + ABCV34_RS07675 0.21 -1.1 1,644,830 + ABCV34_RS07675 0.21 -3.2 1,644,830 + ABCV34_RS07675 0.21 -2.6 1,644,831 - ABCV34_RS07675 0.22 -1.6 1,644,831 - ABCV34_RS07675 0.22 -2.6 1,644,831 - ABCV34_RS07675 0.22 -0.1 1,644,834 - ABCV34_RS07675 0.23 -2.6 1,644,905 + ABCV34_RS07675 0.67 -2.3 1,644,906 - ABCV34_RS07675 0.68 -2.1 1,644,948 + -1.2 1,644,995 + -2.4 1,644,995 + -3.4 1,644,995 + -1.1 1,644,995 + -3.2 1,644,995 + -2.1 1,644,995 + -1.6 1,644,996 - -0.7 1,644,996 - -1.0 1,644,996 - -1.7 1,645,069 + -3.1 1,645,069 + +0.5 1,645,069 + -1.6 1,645,069 + -1.6 1,645,069 + -1.6 1,645,070 - -1.9 1,645,070 - -2.1 1,645,070 - -1.1 1,645,070 - -1.7 1,645,098 + -2.4 1,645,159 + -1.1 1,645,160 - -1.8 1,645,160 - -2.2 1,645,160 - -1.6 1,645,160 - -2.2 1,645,160 - -2.6 1,645,160 - -2.3 1,645,160 - -0.7 1,645,160 - -0.4 1,645,160 - -1.7 1,645,160 - -2.4 1,645,160 - -1.8 1,645,160 - -1.6 1,645,407 - -1.9 1,645,407 - -3.1 1,645,407 - -3.9 1,645,407 - -1.1 1,645,407 - -1.9 1,645,409 - -1.2 1,645,409 - -0.9 1,645,460 + -2.5 1,645,460 + -3.0 1,645,461 - -2.4 1,645,461 - -1.4 1,645,461 - -0.9 1,645,461 - -0.8 1,645,461 - -2.3 1,645,519 - -2.2 1,645,519 - -2.0 1,645,519 - -1.2 1,645,682 + ABCV34_RS07685 0.15 -1.1 1,645,683 - ABCV34_RS07685 0.15 -0.6 1,645,889 + ABCV34_RS07685 0.42 -0.8 1,645,889 + ABCV34_RS07685 0.42 -2.1 1,645,889 + ABCV34_RS07685 0.42 -2.4 1,645,889 + ABCV34_RS07685 0.42 -1.9 1,645,889 + ABCV34_RS07685 0.42 -0.2 1,645,889 + ABCV34_RS07685 0.42 -1.8 1,645,890 - ABCV34_RS07685 0.42 -2.0 1,646,043 + ABCV34_RS07685 0.63 -1.3 1,646,043 + ABCV34_RS07685 0.63 -1.1 1,646,043 + ABCV34_RS07685 0.63 -2.6 1,646,044 - ABCV34_RS07685 0.63 -3.3 1,646,141 + ABCV34_RS07685 0.76 -1.8 1,646,142 - ABCV34_RS07685 0.76 -0.8 1,646,171 + ABCV34_RS07685 0.80 -2.0
Or see this region's nucleotide sequence