Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS06370

Experiment: Anaerobic; ammonium iron(II) sulfate 10 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; ammonium iron(II) sulfate 10 uM
1,384,063	+		ABCV34_RS06365	0.19	-1.0
1,384,064	-		ABCV34_RS06365	0.19	-2.5
1,384,147	-		ABCV34_RS06365	0.26	-1.0
1,384,147	-		ABCV34_RS06365	0.26	-0.8
1,384,209	+		ABCV34_RS06365	0.32	-1.7
1,384,209	+		ABCV34_RS06365	0.32	-1.5
1,384,209	+		ABCV34_RS06365	0.32	-2.5
1,384,210	-		ABCV34_RS06365	0.32	-2.1
1,384,210	-		ABCV34_RS06365	0.32	-2.0
1,384,210	-		ABCV34_RS06365	0.32	-2.0
1,384,210	-		ABCV34_RS06365	0.32	-1.3
1,384,210	-		ABCV34_RS06365	0.32	-2.2
1,384,259	+		ABCV34_RS06365	0.36	-1.5
1,384,259	+		ABCV34_RS06365	0.36	-2.3
1,384,259	+		ABCV34_RS06365	0.36	-0.6
1,384,259	+		ABCV34_RS06365	0.36	-0.2
1,384,259	+		ABCV34_RS06365	0.36	-0.6
1,384,259	+		ABCV34_RS06365	0.36	-1.5
1,384,259	+		ABCV34_RS06365	0.36	-2.8
1,384,260	-		ABCV34_RS06365	0.36	-2.7
1,384,260	-		ABCV34_RS06365	0.36	-2.4
1,384,260	-		ABCV34_RS06365	0.36	+0.0
1,384,260	-		ABCV34_RS06365	0.36	-1.8
1,384,260	-		ABCV34_RS06365	0.36	-1.6
1,384,260	-		ABCV34_RS06365	0.36	+1.0
1,384,260	-		ABCV34_RS06365	0.36	+1.0
1,384,260	-		ABCV34_RS06365	0.36	-0.5
1,384,260	-		ABCV34_RS06365	0.36	-0.7
1,384,326	+		ABCV34_RS06365	0.42	-1.5
1,384,326	+		ABCV34_RS06365	0.42	-0.6
1,384,326	+		ABCV34_RS06365	0.42	-1.9
1,384,326	+		ABCV34_RS06365	0.42	-1.5
1,384,326	+		ABCV34_RS06365	0.42	+0.0
1,384,327	-		ABCV34_RS06365	0.42	-1.8
1,384,327	-		ABCV34_RS06365	0.42	-2.4
1,384,327	-		ABCV34_RS06365	0.42	-2.5
1,384,327	-		ABCV34_RS06365	0.42	-1.9
1,384,358	+		ABCV34_RS06365	0.45	-1.2
1,384,358	+		ABCV34_RS06365	0.45	-2.7
1,384,358	+		ABCV34_RS06365	0.45	-2.4
1,384,358	+		ABCV34_RS06365	0.45	+0.0
1,384,358	+		ABCV34_RS06365	0.45	-1.8
1,384,358	+		ABCV34_RS06365	0.45	-0.6
1,384,358	+		ABCV34_RS06365	0.45	-3.3
1,384,358	+		ABCV34_RS06365	0.45	-1.4
1,384,358	+		ABCV34_RS06365	0.45	-0.7
1,384,358	+		ABCV34_RS06365	0.45	-1.2
1,384,358	+		ABCV34_RS06365	0.45	-1.0
1,384,358	+		ABCV34_RS06365	0.45	-2.2
1,384,358	+		ABCV34_RS06365	0.45	-1.6
1,384,358	+		ABCV34_RS06365	0.45	-2.3
1,384,358	+		ABCV34_RS06365	0.45	-1.3
1,384,359	-		ABCV34_RS06365	0.45	+0.0
1,384,359	-		ABCV34_RS06365	0.45	-1.6
1,384,359	-		ABCV34_RS06365	0.45	-2.4
1,384,359	-		ABCV34_RS06365	0.45	-2.6
1,384,359	-		ABCV34_RS06365	0.45	-1.1
1,384,359	-		ABCV34_RS06365	0.45	-1.0
1,384,359	-		ABCV34_RS06365	0.45	-1.0
1,384,359	-		ABCV34_RS06365	0.45	-2.3
1,384,359	-		ABCV34_RS06365	0.45	-1.5
1,384,359	-		ABCV34_RS06365	0.45	-1.1
1,384,359	-		ABCV34_RS06365	0.45	-1.0
1,384,359	-		ABCV34_RS06365	0.45	-1.9
1,384,360	+		ABCV34_RS06365	0.45	-0.1
1,384,360	+		ABCV34_RS06365	0.45	-1.8
1,384,360	+		ABCV34_RS06365	0.45	-0.7
1,384,360	+		ABCV34_RS06365	0.45	-2.0
1,384,360	+		ABCV34_RS06365	0.45	-0.8
1,384,360	+		ABCV34_RS06365	0.45	-2.1
1,384,360	+		ABCV34_RS06365	0.45	-1.6
1,384,360	+		ABCV34_RS06365	0.45	-1.6
1,384,361	-		ABCV34_RS06365	0.45	-1.6
1,384,361	-		ABCV34_RS06365	0.45	-2.3
1,384,361	-		ABCV34_RS06365	0.45	-1.0
1,384,361	-		ABCV34_RS06365	0.45	-1.8
1,384,410	+		ABCV34_RS06365	0.50	-3.2
1,384,410	+		ABCV34_RS06365	0.50	-1.0
1,384,410	+		ABCV34_RS06365	0.50	-2.0
1,384,410	+		ABCV34_RS06365	0.50	-3.2
1,384,410	+		ABCV34_RS06365	0.50	-1.6
1,384,410	+		ABCV34_RS06365	0.50	-0.6
1,384,411	-		ABCV34_RS06365	0.50	-2.0
1,384,411	-		ABCV34_RS06365	0.50	-1.1
1,384,411	-		ABCV34_RS06365	0.50	-2.1
1,384,411	-		ABCV34_RS06365	0.50	+0.4
1,384,411	-		ABCV34_RS06365	0.50	-1.3
1,384,411	-		ABCV34_RS06365	0.50	-2.0
1,384,411	-		ABCV34_RS06365	0.50	+0.0
1,384,411	-		ABCV34_RS06365	0.50	-2.0
1,384,411	-		ABCV34_RS06365	0.50	-2.1
1,384,411	-		ABCV34_RS06365	0.50	-2.1
1,384,459	+		ABCV34_RS06365	0.54	-2.1
1,384,459	+		ABCV34_RS06365	0.54	-1.9
1,384,459	+		ABCV34_RS06365	0.54	-0.6
1,384,459	+		ABCV34_RS06365	0.54	+0.0
1,384,656	+		ABCV34_RS06365	0.72	-1.4
1,384,656	+		ABCV34_RS06365	0.72	-1.6
1,384,656	+		ABCV34_RS06365	0.72	-1.0
1,384,656	+		ABCV34_RS06365	0.72	-1.6
1,384,656	+		ABCV34_RS06365	0.72	-1.0
1,384,656	+		ABCV34_RS06365	0.72	-3.0
1,384,656	+		ABCV34_RS06365	0.72	-1.3
1,384,656	+		ABCV34_RS06365	0.72	-1.8
1,384,656	+		ABCV34_RS06365	0.72	-2.2
1,384,656	+		ABCV34_RS06365	0.72	-2.8
1,384,656	+		ABCV34_RS06365	0.72	-2.9
1,384,656	+		ABCV34_RS06365	0.72	-1.2
1,384,656	+		ABCV34_RS06365	0.72	-1.9
1,384,656	+		ABCV34_RS06365	0.72	-2.3
1,384,656	+		ABCV34_RS06365	0.72	-3.4
1,384,656	+		ABCV34_RS06365	0.72	-2.0
1,384,656	+		ABCV34_RS06365	0.72	-2.8
1,384,656	+		ABCV34_RS06365	0.72	+1.0
1,384,656	+		ABCV34_RS06365	0.72	-1.3
1,384,656	+		ABCV34_RS06365	0.72	-1.8
1,384,656	+		ABCV34_RS06365	0.72	-1.4
1,384,656	+		ABCV34_RS06365	0.72	-1.4
1,384,656	+		ABCV34_RS06365	0.72	-1.2
1,384,656	+		ABCV34_RS06365	0.72	-1.0
1,384,656	+		ABCV34_RS06365	0.72	-1.6
1,384,656	+		ABCV34_RS06365	0.72	-1.4
1,384,657	-		ABCV34_RS06365	0.72	-2.4
1,384,657	-		ABCV34_RS06365	0.72	-1.6
1,384,657	-		ABCV34_RS06365	0.72	-0.6
1,384,657	-		ABCV34_RS06365	0.72	-1.6
1,384,657	-		ABCV34_RS06365	0.72	-0.6
1,384,657	-		ABCV34_RS06365	0.72	-2.9
1,384,657	-		ABCV34_RS06365	0.72	-2.0
1,384,657	-		ABCV34_RS06365	0.72	-1.0
1,384,657	-		ABCV34_RS06365	0.72	-1.0
1,384,657	-		ABCV34_RS06365	0.72	-2.3
1,384,657	-		ABCV34_RS06365	0.72	-1.6
1,384,657	-		ABCV34_RS06365	0.72	-0.6
1,384,657	-		ABCV34_RS06365	0.72	-2.0
1,384,657	-		ABCV34_RS06365	0.72	-1.4
1,384,657	-		ABCV34_RS06365	0.72	-2.6
1,384,673	+		ABCV34_RS06365	0.73	-1.6
1,384,673	+		ABCV34_RS06365	0.73	-2.5
1,384,674	-		ABCV34_RS06365	0.73	-1.6
1,384,674	-		ABCV34_RS06365	0.73	-1.6
1,384,674	-		ABCV34_RS06365	0.73	-3.1
1,384,674	-		ABCV34_RS06365	0.73	-2.0
1,384,674	-		ABCV34_RS06365	0.73	-1.8
1,384,674	-		ABCV34_RS06365	0.73	-4.5
1,384,695	+		ABCV34_RS06365	0.75	-0.6
1,384,777	+		ABCV34_RS06365	0.82	-2.4
1,384,777	+		ABCV34_RS06365	0.82	-1.6
1,384,778	-		ABCV34_RS06365	0.82	-1.3
1,384,889	+				-1.8
1,384,889	+				-3.0
1,384,889	+				-0.6
1,384,889	+				-1.0
1,384,889	+				-1.3
1,384,889	+				-2.2
1,384,890	-				-1.3
1,384,890	-				-1.1
1,384,890	-				-2.0
1,384,890	-				-1.7
1,384,890	-				-2.3
1,384,890	-				+0.4
1,384,890	-				-3.1
1,384,974	+				-2.3
1,384,974	+				-2.0
1,384,974	+				-0.8
1,384,975	-				-0.6
1,384,975	-				-0.6
1,384,975	-				-1.7
1,384,978	+				-2.7
1,384,978	+				-1.2
1,384,978	+				-1.2
1,384,978	+				+0.0
1,384,979	-				-1.3
1,384,979	-				-1.6
1,384,979	-				-1.4
1,384,979	-				-1.4
1,384,979	-				-1.0
1,385,152	+		ABCV34_RS06370	0.14	-0.4
1,385,152	+		ABCV34_RS06370	0.14	-1.8
1,385,153	-		ABCV34_RS06370	0.15	+0.0
1,385,153	-		ABCV34_RS06370	0.15	-4.2
1,385,153	-		ABCV34_RS06370	0.15	-4.0
1,385,167	-		ABCV34_RS06370	0.16	-1.0
1,385,173	+		ABCV34_RS06370	0.16	-2.4
1,385,173	+		ABCV34_RS06370	0.16	-1.6
1,385,173	+		ABCV34_RS06370	0.16	-2.8
1,385,173	+		ABCV34_RS06370	0.16	-1.0
1,385,173	+		ABCV34_RS06370	0.16	+0.0
1,385,174	-		ABCV34_RS06370	0.17	-2.0
1,385,174	-		ABCV34_RS06370	0.17	-3.3
1,385,174	-		ABCV34_RS06370	0.17	+0.0
1,385,174	-		ABCV34_RS06370	0.17	-3.0
1,385,174	-		ABCV34_RS06370	0.17	-4.0
1,385,174	-		ABCV34_RS06370	0.17	-2.3
1,385,174	-		ABCV34_RS06370	0.17	-1.6
1,385,174	-		ABCV34_RS06370	0.17	-1.3
1,385,174	-		ABCV34_RS06370	0.17	-3.3
1,385,175	+		ABCV34_RS06370	0.17	-2.8
1,385,176	-		ABCV34_RS06370	0.17	-1.0
1,385,214	+		ABCV34_RS06370	0.20	-0.5
1,385,214	+		ABCV34_RS06370	0.20	-1.9
1,385,214	+		ABCV34_RS06370	0.20	-2.8
1,385,215	-		ABCV34_RS06370	0.20	-2.3
1,385,336	-		ABCV34_RS06370	0.32	-1.1
1,385,337	+		ABCV34_RS06370	0.32	+0.1
1,385,337	+		ABCV34_RS06370	0.32	-1.3
1,385,337	+		ABCV34_RS06370	0.32	-1.0
1,385,337	+		ABCV34_RS06370	0.32	-1.8
1,385,337	+		ABCV34_RS06370	0.32	-0.8
1,385,338	-		ABCV34_RS06370	0.32	-0.9
1,385,338	-		ABCV34_RS06370	0.32	-1.8
1,385,338	-		ABCV34_RS06370	0.32	-2.3
1,385,338	-		ABCV34_RS06370	0.32	-1.8
1,385,338	-		ABCV34_RS06370	0.32	-2.0
1,385,338	-		ABCV34_RS06370	0.32	-1.0
1,385,338	-		ABCV34_RS06370	0.32	-2.1
1,385,338	-		ABCV34_RS06370	0.32	-1.9
1,385,338	-		ABCV34_RS06370	0.32	-3.4
1,385,338	-		ABCV34_RS06370	0.32	-2.2
1,385,341	+		ABCV34_RS06370	0.32	+0.0
1,385,341	+		ABCV34_RS06370	0.32	-1.0
1,385,342	-		ABCV34_RS06370	0.32	-1.0
1,385,342	-		ABCV34_RS06370	0.32	-0.4
1,385,342	-		ABCV34_RS06370	0.32	-0.4
1,385,342	-		ABCV34_RS06370	0.32	-1.8
1,385,493	+		ABCV34_RS06370	0.47	-1.4
1,385,493	+		ABCV34_RS06370	0.47	-2.0
1,385,493	+		ABCV34_RS06370	0.47	-1.8
1,385,493	+		ABCV34_RS06370	0.47	-1.1
1,385,643	+		ABCV34_RS06370	0.61	-3.6
1,385,644	-		ABCV34_RS06370	0.61	-1.8
1,385,644	-		ABCV34_RS06370	0.61	-1.4
1,385,860	-		ABCV34_RS06370	0.82	-2.6
1,385,898	+		ABCV34_RS06370	0.85	-2.6
1,385,898	+		ABCV34_RS06370	0.85	-0.6
1,385,898	+		ABCV34_RS06370	0.85	-3.1
1,385,899	-		ABCV34_RS06370	0.85	-2.7
1,385,899	-		ABCV34_RS06370	0.85	-0.6
1,385,899	-		ABCV34_RS06370	0.85	-1.4
1,385,899	-		ABCV34_RS06370	0.85	-1.6
1,385,934	+		ABCV34_RS06370	0.89	-3.0
1,385,935	-		ABCV34_RS06370	0.89	-0.5
1,386,026	+				-2.3
1,386,026	+				-0.6
1,386,026	+				-1.6
1,386,026	+				-2.1
1,386,026	+				-1.0
1,386,026	+				-1.8
1,386,026	+				-3.2
1,386,027	-				-2.4
1,386,027	-				-1.9
1,386,027	-				-2.2
1,386,027	-				-0.8
1,386,027	-				-1.6
1,386,037	+				-1.9
1,386,075	+				-2.6
1,386,075	+				-3.7
1,386,075	+				-1.2
1,386,075	+				-1.2
1,386,075	+				-1.8
1,386,075	+				-1.7
1,386,076	-				-2.3
1,386,076	-				-2.9
1,386,076	-				-0.4
1,386,076	-				-0.6
1,386,185	+				-1.2
1,386,246	+				-1.1
1,386,246	+				-1.2
1,386,246	+				-0.6
1,386,246	+				-1.6
1,386,250	+				-3.0
1,386,251	-				-2.1
1,386,256	+				+0.3
1,386,256	+				-2.3
1,386,256	+				-0.6
1,386,256	+				-1.6
1,386,256	+				-2.6
1,386,256	+				-1.8
1,386,256	+				-2.7
1,386,257	-				+1.0
1,386,257	-				-2.6
1,386,257	-				-2.2
1,386,257	-				-2.3
1,386,257	-				-1.0
1,386,268	+				-1.0
1,386,268	+				-4.2
1,386,593	+		ABCV34_RS06375	0.23	-3.6
1,386,593	+		ABCV34_RS06375	0.23	-2.6
1,386,593	+		ABCV34_RS06375	0.23	-2.0
1,386,594	-		ABCV34_RS06375	0.23	-2.1
1,386,594	-		ABCV34_RS06375	0.23	-0.4
1,386,622	-		ABCV34_RS06375	0.26	-1.9
1,386,651	-		ABCV34_RS06375	0.28	-0.7
1,386,711	+		ABCV34_RS06375	0.34	-1.5
1,386,712	-		ABCV34_RS06375	0.34	-2.2
1,386,752	+		ABCV34_RS06375	0.38	-0.8
1,386,752	+		ABCV34_RS06375	0.38	-2.3
1,386,752	+		ABCV34_RS06375	0.38	-0.5
1,386,752	+		ABCV34_RS06375	0.38	-1.8
1,386,752	+		ABCV34_RS06375	0.38	-2.5
1,386,753	-		ABCV34_RS06375	0.38	-1.7
1,386,753	-		ABCV34_RS06375	0.38	-0.8
1,386,753	-		ABCV34_RS06375	0.38	-2.1
1,386,753	-		ABCV34_RS06375	0.38	-1.5
1,386,767	+		ABCV34_RS06375	0.39	-1.8
1,386,767	+		ABCV34_RS06375	0.39	+0.8
1,387,019	+		ABCV34_RS06375	0.62	-1.9
1,387,020	-		ABCV34_RS06375	0.62	-0.8