Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS09145

Experiment: Anaerobic; ammonium iron(II) sulfate 10 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; ammonium iron(II) sulfate 10 uM
1,955,434	+		ABCV34_RS09140	0.86	-1.7
1,955,434	+		ABCV34_RS09140	0.86	-1.4
1,955,434	+		ABCV34_RS09140	0.86	-1.7
1,955,435	-		ABCV34_RS09140	0.87	-1.7
1,955,435	-		ABCV34_RS09140	0.87	-2.1
1,955,435	-		ABCV34_RS09140	0.87	-3.3
1,955,435	-		ABCV34_RS09140	0.87	-1.6
1,955,781	+				-1.2
1,955,781	+				-0.1
1,955,781	+				-2.5
1,955,781	+				-1.1
1,955,781	+				-1.1
1,955,781	+				-1.2
1,955,781	+				-1.4
1,955,781	+				-2.1
1,955,782	-				-2.3
1,955,782	-				-1.7
1,955,782	-				-0.6
1,955,782	-				-2.2
1,955,782	-				-2.0
1,955,782	-				-2.1
1,955,782	-				-2.3
1,955,782	-				-2.4
1,955,782	-				-1.8
1,955,782	-				-0.9
1,955,883	+				+0.5
1,955,883	+				-1.4
1,955,883	+				-2.7
1,955,883	+				-0.9
1,955,883	+				-1.7
1,955,883	+				-2.4
1,955,883	+				-0.8
1,955,884	-				-2.0
1,955,884	-				-1.7
1,955,884	-				-1.5
1,955,884	-				-2.1
1,955,884	-				-0.5
1,955,884	-				-1.3
1,955,884	-				-2.2
1,955,884	-				-3.3
1,956,063	+				-1.0
1,956,067	+				-1.8
1,956,067	+				-1.7
1,956,067	+				-2.2
1,956,068	-				-1.7
1,956,068	-				-1.9
1,956,139	-				-2.9
1,956,139	-				-0.9
1,956,139	-				-2.1
1,956,141	+				-0.9
1,956,141	+				-2.3
1,956,141	+				-1.3
1,956,141	+				-1.9
1,956,141	+				+0.9
1,956,141	+				-3.1
1,956,141	+				-1.3
1,956,142	-				-0.8
1,956,142	-				-1.0
1,956,142	-				-1.9
1,956,142	-				-1.5
1,956,142	-				-2.1
1,956,142	-				-1.3
1,956,142	-				-2.2
1,956,142	-				-1.4
1,956,142	-				-1.8
1,956,142	-				-1.0
1,956,142	-				-1.4
1,956,264	+				-0.3
1,956,264	+				-1.7
1,956,373	+				-1.9
1,956,373	+				-3.3
1,956,373	+				-1.4
1,956,374	-				-3.2
1,956,374	-				-1.5
1,956,582	+		ABCV34_RS09145	0.11	-1.3
1,956,582	+		ABCV34_RS09145	0.11	-1.4
1,956,582	+		ABCV34_RS09145	0.11	-2.5
1,956,583	-		ABCV34_RS09145	0.11	-1.8
1,956,597	+		ABCV34_RS09145	0.12	-1.4
1,956,597	+		ABCV34_RS09145	0.12	-2.1
1,956,598	-		ABCV34_RS09145	0.12	-1.9
1,956,598	-		ABCV34_RS09145	0.12	-2.1
1,956,598	-		ABCV34_RS09145	0.12	-1.1
1,956,598	-		ABCV34_RS09145	0.12	-2.3
1,956,598	-		ABCV34_RS09145	0.12	-1.9
1,956,662	+		ABCV34_RS09145	0.16	-0.3
1,956,662	+		ABCV34_RS09145	0.16	-1.2
1,956,663	-		ABCV34_RS09145	0.16	-1.2
1,956,663	-		ABCV34_RS09145	0.16	-1.2
1,956,681	+		ABCV34_RS09145	0.17	-1.4
1,956,681	+		ABCV34_RS09145	0.17	-0.8
1,956,682	-		ABCV34_RS09145	0.17	-1.7
1,956,682	-		ABCV34_RS09145	0.17	-1.8
1,956,682	-		ABCV34_RS09145	0.17	-2.3
1,956,861	+		ABCV34_RS09145	0.28	-2.6
1,956,861	+		ABCV34_RS09145	0.28	-2.1
1,956,861	+		ABCV34_RS09145	0.28	-1.8
1,956,861	+		ABCV34_RS09145	0.28	-1.6
1,956,861	+		ABCV34_RS09145	0.28	-1.9
1,956,862	-		ABCV34_RS09145	0.28	-1.7
1,956,862	-		ABCV34_RS09145	0.28	+0.3
1,956,862	-		ABCV34_RS09145	0.28	-1.1
1,956,862	-		ABCV34_RS09145	0.28	-1.8
1,956,909	+		ABCV34_RS09145	0.31	-1.7
1,956,909	+		ABCV34_RS09145	0.31	-1.1
1,956,909	+		ABCV34_RS09145	0.31	-1.6
1,956,909	+		ABCV34_RS09145	0.31	-2.7
1,956,910	-		ABCV34_RS09145	0.31	-1.8
1,956,910	-		ABCV34_RS09145	0.31	-1.7
1,956,910	-		ABCV34_RS09145	0.31	-1.5
1,956,957	+		ABCV34_RS09145	0.34	-1.5
1,956,958	-		ABCV34_RS09145	0.34	-0.8
1,957,234	+		ABCV34_RS09145	0.51	-1.0
1,957,234	+		ABCV34_RS09145	0.51	-1.3
1,957,234	+		ABCV34_RS09145	0.51	-2.2
1,957,234	+		ABCV34_RS09145	0.51	-1.5
1,957,235	-		ABCV34_RS09145	0.51	-1.5
1,957,379	+		ABCV34_RS09145	0.60	-2.0
1,957,379	+		ABCV34_RS09145	0.60	-1.6
1,957,379	+		ABCV34_RS09145	0.60	-2.7
1,957,380	-		ABCV34_RS09145	0.60	-1.5
1,957,380	-		ABCV34_RS09145	0.60	-1.1
1,957,380	-		ABCV34_RS09145	0.60	-1.3
1,957,406	+		ABCV34_RS09145	0.62	-0.7
1,957,406	+		ABCV34_RS09145	0.62	-1.7
1,957,406	+		ABCV34_RS09145	0.62	-2.3
1,957,406	+		ABCV34_RS09145	0.62	-2.4
1,957,407	-		ABCV34_RS09145	0.62	-2.1
1,957,407	-		ABCV34_RS09145	0.62	-1.3
1,957,407	-		ABCV34_RS09145	0.62	-1.9
1,957,407	-		ABCV34_RS09145	0.62	-1.7
1,957,407	-		ABCV34_RS09145	0.62	-1.5
1,957,407	-		ABCV34_RS09145	0.62	-1.6
1,957,407	-		ABCV34_RS09145	0.62	-1.9
1,957,407	-		ABCV34_RS09145	0.62	-2.1
1,957,553	+		ABCV34_RS09145	0.71	-1.8
1,958,003	-				-1.7
1,958,006	+				-1.3
1,958,006	+				-1.5
1,958,007	-				-0.5
1,958,018	+				-1.9
1,958,018	+				-1.7
1,958,018	+				-1.1
1,958,018	+				-1.5
1,958,018	+				-0.8
1,958,018	+				-1.2
1,958,019	-				-1.5
1,958,019	-				-1.5
1,958,019	-				-0.6
1,958,019	-				-1.7
1,958,019	-				-1.4
1,958,019	-				-1.0
1,958,019	-				-1.5
1,958,019	-				-1.3
1,958,019	-				-1.5
1,958,019	-				-1.4
1,958,068	+				-1.7
1,958,069	-				-1.4
1,958,069	-				-1.1
1,958,069	-				-0.6
1,958,069	-				-0.7
1,958,095	+				-1.6
1,958,095	+				-1.3
1,958,095	+				-0.9
1,958,095	+				-1.8
1,958,095	+				-1.1
1,958,095	+				-0.7
1,958,095	+				-1.1
1,958,095	+				-1.4
1,958,095	+				-1.0
1,958,095	+				+0.5
1,958,096	-				-0.6
1,958,096	-				-2.7
1,958,257	+		ABCV34_RS09150	0.24	-1.1
1,958,258	-		ABCV34_RS09150	0.24	-1.0
1,958,258	-		ABCV34_RS09150	0.24	-3.7
1,958,344	+		ABCV34_RS09150	0.32	-3.1
1,958,344	+		ABCV34_RS09150	0.32	-1.1
1,958,344	+		ABCV34_RS09150	0.32	-1.5
1,958,344	+		ABCV34_RS09150	0.32	-1.9
1,958,344	+		ABCV34_RS09150	0.32	-1.9
1,958,344	+		ABCV34_RS09150	0.32	-1.3
1,958,344	+		ABCV34_RS09150	0.32	-0.9
1,958,344	+		ABCV34_RS09150	0.32	-1.7
1,958,345	-		ABCV34_RS09150	0.32	-1.3
1,958,345	-		ABCV34_RS09150	0.32	-1.5
1,958,345	-		ABCV34_RS09150	0.32	-1.7
1,958,345	-		ABCV34_RS09150	0.32	-1.4
1,958,345	-		ABCV34_RS09150	0.32	-1.8
1,958,398	+		ABCV34_RS09150	0.37	-2.6
1,958,398	+		ABCV34_RS09150	0.37	-0.7
1,958,398	+		ABCV34_RS09150	0.37	-1.9
1,958,398	+		ABCV34_RS09150	0.37	-0.3
1,958,398	+		ABCV34_RS09150	0.37	-1.1
1,958,398	+		ABCV34_RS09150	0.37	-1.4
1,958,398	+		ABCV34_RS09150	0.37	-2.6
1,958,399	-		ABCV34_RS09150	0.37	-1.3
1,958,399	-		ABCV34_RS09150	0.37	-0.9
1,958,399	-		ABCV34_RS09150	0.37	-1.2
1,958,461	+		ABCV34_RS09150	0.43	-1.5
1,958,461	+		ABCV34_RS09150	0.43	-1.8
1,958,461	+		ABCV34_RS09150	0.43	-1.8
1,958,461	+		ABCV34_RS09150	0.43	-1.3
1,958,461	+		ABCV34_RS09150	0.43	-1.3
1,958,461	+		ABCV34_RS09150	0.43	-0.8
1,958,461	+		ABCV34_RS09150	0.43	-1.6
1,958,461	+		ABCV34_RS09150	0.43	-2.3
1,958,461	+		ABCV34_RS09150	0.43	-0.9
1,958,461	+		ABCV34_RS09150	0.43	+0.5
1,958,461	+		ABCV34_RS09150	0.43	-1.9
1,958,461	+		ABCV34_RS09150	0.43	-2.6
1,958,461	+		ABCV34_RS09150	0.43	-1.4
1,958,462	-		ABCV34_RS09150	0.43	-1.5
1,958,462	-		ABCV34_RS09150	0.43	-1.3
1,958,462	-		ABCV34_RS09150	0.43	-1.6
1,958,462	-		ABCV34_RS09150	0.43	-1.3
1,958,462	-		ABCV34_RS09150	0.43	-0.8
1,958,462	-		ABCV34_RS09150	0.43	-1.8
1,958,462	-		ABCV34_RS09150	0.43	-1.5
1,958,462	-		ABCV34_RS09150	0.43	-1.2
1,958,487	+		ABCV34_RS09150	0.45	-1.2
1,958,487	+		ABCV34_RS09150	0.45	-4.3
1,958,488	-		ABCV34_RS09150	0.45	-1.6
1,958,488	-		ABCV34_RS09150	0.45	-1.3
1,958,488	-		ABCV34_RS09150	0.45	-1.6
1,958,488	-		ABCV34_RS09150	0.45	-1.8
1,958,488	-		ABCV34_RS09150	0.45	-1.7
1,958,488	-		ABCV34_RS09150	0.45	-1.7
1,958,575	+		ABCV34_RS09150	0.53	-1.5
1,958,575	+		ABCV34_RS09150	0.53	-0.7
1,958,576	-		ABCV34_RS09150	0.53	-1.7
1,958,641	+		ABCV34_RS09150	0.59	-1.9
1,958,641	+		ABCV34_RS09150	0.59	-1.1
1,958,642	-		ABCV34_RS09150	0.59	-1.5
1,958,642	-		ABCV34_RS09150	0.59	-2.1
1,958,678	+		ABCV34_RS09150	0.62	-1.4
1,958,679	-		ABCV34_RS09150	0.62	-1.0
1,958,679	-		ABCV34_RS09150	0.62	-1.2
1,958,679	-		ABCV34_RS09150	0.62	-1.8
1,958,731	+		ABCV34_RS09150	0.67	-2.2
1,958,731	+		ABCV34_RS09150	0.67	-2.1
1,958,731	+		ABCV34_RS09150	0.67	-0.7
1,958,732	-		ABCV34_RS09150	0.67	-0.9
1,958,732	-		ABCV34_RS09150	0.67	-1.2
1,958,732	-		ABCV34_RS09150	0.67	-1.4