Experiment: Anaerobic; ammonium iron(II) sulfate 10 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABCV34_RS02065 and ABCV34_RS02070 overlap by 11 nucleotides ABCV34_RS02070 and ABCV34_RS02075 are separated by 49 nucleotides ABCV34_RS02075 and ABCV34_RS02080 are separated by 171 nucleotides ABCV34_RS02080 and ABCV34_RS02085 are separated by 300 nucleotides
ABCV34_RS02065: ABCV34_RS02065 - type II toxin-antitoxin system Phd/YefM family antitoxin, at 467,207 to 467,455
_RS02065
ABCV34_RS02070: ABCV34_RS02070 - type II toxin-antitoxin system RelE/ParE family toxin, at 467,445 to 467,726
_RS02070
ABCV34_RS02075: ABCV34_RS02075 - helix-turn-helix transcriptional regulator, at 467,776 to 468,036
_RS02075
ABCV34_RS02080: ABCV34_RS02080 - hypothetical protein, at 468,208 to 468,561
_RS02080
ABCV34_RS02085: ABCV34_RS02085 - hypothetical protein, at 468,862 to 469,350
_RS02085
Position (kb) 468
469 Strain fitness (log2 ratio) -2
-1
0
1 at 467.451 kb on + strand at 467.451 kb on + strand at 467.451 kb on + strand at 467.451 kb on + strand at 467.451 kb on + strand at 467.451 kb on + strand at 467.451 kb on + strand at 467.452 kb on - strand at 467.453 kb on + strand at 467.453 kb on + strand at 467.453 kb on + strand at 467.454 kb on - strand at 467.634 kb on + strand, within ABCV34_RS02070 at 467.635 kb on - strand, within ABCV34_RS02070 at 467.635 kb on - strand, within ABCV34_RS02070 at 467.641 kb on + strand, within ABCV34_RS02070 at 467.703 kb on + strand at 467.703 kb on + strand at 467.703 kb on + strand at 467.749 kb on + strand at 467.760 kb on + strand at 467.772 kb on + strand at 467.870 kb on - strand, within ABCV34_RS02075 at 467.906 kb on - strand, within ABCV34_RS02075 at 468.101 kb on - strand at 468.904 kb on + strand at 468.904 kb on + strand at 468.955 kb on - strand, within ABCV34_RS02085 at 469.031 kb on + strand, within ABCV34_RS02085 at 469.031 kb on + strand, within ABCV34_RS02085 at 469.117 kb on + strand, within ABCV34_RS02085 at 469.214 kb on + strand, within ABCV34_RS02085 at 469.245 kb on - strand, within ABCV34_RS02085 at 469.302 kb on + strand at 469.441 kb on + strand at 469.461 kb on + strand at 469.549 kb on + strand at 469.550 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic; ammonium iron(II) sulfate 10 uM remove 467,451 + -2.0 467,451 + -2.3 467,451 + -0.9 467,451 + -1.6 467,451 + -2.5 467,451 + -2.4 467,451 + -0.4 467,452 - -1.8 467,453 + -2.6 467,453 + -0.9 467,453 + -2.1 467,454 - -0.5 467,634 + ABCV34_RS02070 0.67 -2.5 467,635 - ABCV34_RS02070 0.67 -1.5 467,635 - ABCV34_RS02070 0.67 -1.5 467,641 + ABCV34_RS02070 0.70 -0.8 467,703 + -1.7 467,703 + -2.5 467,703 + -2.5 467,749 + +0.1 467,760 + -1.5 467,772 + +0.1 467,870 - ABCV34_RS02075 0.36 -0.9 467,906 - ABCV34_RS02075 0.50 +0.1 468,101 - +0.1 468,904 + +0.1 468,904 + -0.9 468,955 - ABCV34_RS02085 0.19 -0.9 469,031 + ABCV34_RS02085 0.35 -2.2 469,031 + ABCV34_RS02085 0.35 -0.9 469,117 + ABCV34_RS02085 0.52 -1.5 469,214 + ABCV34_RS02085 0.72 -2.2 469,245 - ABCV34_RS02085 0.78 +0.1 469,302 + +0.1 469,441 + -2.7 469,461 + -0.9 469,549 + -0.9 469,550 - +0.1
Or see this region's nucleotide sequence