Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS14090

Experiment: Anaerobic; ammonium iron(II) sulfate 10 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; ammonium iron(II) sulfate 10 uM
2,984,532	+		ABCV34_RS14085	0.36	-0.6
2,984,532	+		ABCV34_RS14085	0.36	-0.4
2,984,533	-		ABCV34_RS14085	0.36	-1.5
2,984,533	-		ABCV34_RS14085	0.36	-1.9
2,984,899	+		ABCV34_RS14085	0.67	+0.5
2,984,899	+		ABCV34_RS14085	0.67	-1.3
2,984,899	+		ABCV34_RS14085	0.67	-1.2
2,984,900	-		ABCV34_RS14085	0.67	-0.7
2,984,900	-		ABCV34_RS14085	0.67	-1.6
2,984,900	-		ABCV34_RS14085	0.67	-1.9
2,984,900	-		ABCV34_RS14085	0.67	-1.3
2,985,297	+				-1.5
2,985,297	+				-2.0
2,985,297	+				-1.5
2,985,297	+				-1.2
2,985,297	+				-1.1
2,985,297	+				-1.6
2,985,297	+				-3.1
2,985,297	+				-3.0
2,985,298	-				-2.4
2,985,298	-				-1.2
2,985,298	-				-1.1
2,985,298	-				-2.2
2,985,298	-				-1.5
2,985,298	-				-2.0
2,985,298	-				-1.8
2,985,298	-				-1.6
2,985,298	-				-1.6
2,985,298	-				-2.2
2,985,409	+				-1.6
2,985,410	-				-1.6
2,985,410	-				-1.6
2,985,410	-				-1.1
2,985,639	-		ABCV34_RS14090	0.10	-2.1
2,985,766	+		ABCV34_RS14090	0.15	-2.2
2,985,766	+		ABCV34_RS14090	0.15	-1.4
2,985,766	+		ABCV34_RS14090	0.15	-1.4
2,985,767	-		ABCV34_RS14090	0.15	-1.7
2,985,823	+		ABCV34_RS14090	0.17	-2.3
2,985,823	+		ABCV34_RS14090	0.17	-1.8
2,985,823	+		ABCV34_RS14090	0.17	-0.8
2,985,823	+		ABCV34_RS14090	0.17	-1.8
2,985,824	-		ABCV34_RS14090	0.17	-1.2
2,985,824	-		ABCV34_RS14090	0.17	-3.8
2,985,824	-		ABCV34_RS14090	0.17	-2.0
2,985,836	+		ABCV34_RS14090	0.18	-0.5
2,985,837	-		ABCV34_RS14090	0.18	-1.4
2,985,837	-		ABCV34_RS14090	0.18	-2.3
2,985,893	+		ABCV34_RS14090	0.20	-1.8
2,986,097	+		ABCV34_RS14090	0.28	-1.1
2,986,097	+		ABCV34_RS14090	0.28	-2.5
2,986,150	+		ABCV34_RS14090	0.30	-2.8
2,986,150	+		ABCV34_RS14090	0.30	-2.4
2,986,151	-		ABCV34_RS14090	0.30	-1.8
2,986,151	-		ABCV34_RS14090	0.30	-1.8
2,986,151	-		ABCV34_RS14090	0.30	-1.6
2,986,151	-		ABCV34_RS14090	0.30	-2.1
2,986,187	+		ABCV34_RS14090	0.31	-1.7
2,986,188	-		ABCV34_RS14090	0.31	-1.3
2,986,363	+		ABCV34_RS14090	0.38	-1.4
2,986,364	-		ABCV34_RS14090	0.38	-2.0
2,986,364	-		ABCV34_RS14090	0.38	-1.4
2,986,535	+		ABCV34_RS14090	0.45	-2.1
2,986,535	+		ABCV34_RS14090	0.45	-1.6
2,986,536	-		ABCV34_RS14090	0.45	-1.8
2,986,536	-		ABCV34_RS14090	0.45	-0.7
2,986,536	-		ABCV34_RS14090	0.45	-0.6
2,986,536	-		ABCV34_RS14090	0.45	-1.8
2,986,595	+		ABCV34_RS14090	0.47	-1.4
2,986,596	-		ABCV34_RS14090	0.47	-1.8
2,986,596	-		ABCV34_RS14090	0.47	-1.7
2,986,682	+		ABCV34_RS14090	0.51	-1.3
2,986,682	+		ABCV34_RS14090	0.51	-1.6
2,986,682	+		ABCV34_RS14090	0.51	-1.9
2,986,683	-		ABCV34_RS14090	0.51	-2.0
2,986,683	-		ABCV34_RS14090	0.51	-2.8
2,986,683	-		ABCV34_RS14090	0.51	-1.4
2,986,791	+		ABCV34_RS14090	0.55	-1.1
2,987,003	+		ABCV34_RS14090	0.63	-1.3
2,987,003	+		ABCV34_RS14090	0.63	-1.1
2,987,003	+		ABCV34_RS14090	0.63	-2.3
2,987,003	+		ABCV34_RS14090	0.63	-1.8
2,987,003	+		ABCV34_RS14090	0.63	-0.4
2,987,003	+		ABCV34_RS14090	0.63	-2.0
2,987,003	+		ABCV34_RS14090	0.63	-1.2
2,987,003	+		ABCV34_RS14090	0.63	-1.6
2,987,003	+		ABCV34_RS14090	0.63	-1.8
2,987,004	-		ABCV34_RS14090	0.63	-0.1
2,987,004	-		ABCV34_RS14090	0.63	-0.8
2,987,004	-		ABCV34_RS14090	0.63	-1.5
2,987,004	-		ABCV34_RS14090	0.63	-1.6
2,987,004	-		ABCV34_RS14090	0.63	-2.3
2,987,071	+		ABCV34_RS14090	0.65	-1.0
2,987,071	+		ABCV34_RS14090	0.65	-1.8
2,987,071	+		ABCV34_RS14090	0.65	-2.6
2,987,071	+		ABCV34_RS14090	0.65	-1.7
2,987,071	+		ABCV34_RS14090	0.65	-1.1
2,987,071	+		ABCV34_RS14090	0.65	-2.3
2,987,072	-		ABCV34_RS14090	0.66	-1.6
2,987,072	-		ABCV34_RS14090	0.66	-2.6
2,987,072	-		ABCV34_RS14090	0.66	-1.8
2,987,072	-		ABCV34_RS14090	0.66	-2.2
2,987,240	+		ABCV34_RS14090	0.72	-1.9
2,987,240	+		ABCV34_RS14090	0.72	-1.9
2,987,241	-		ABCV34_RS14090	0.72	-1.7
2,987,241	-		ABCV34_RS14090	0.72	-1.8
2,987,522	+		ABCV34_RS14090	0.83	-1.5
2,987,522	+		ABCV34_RS14090	0.83	-2.0
2,987,522	+		ABCV34_RS14090	0.83	-1.6
2,987,522	+		ABCV34_RS14090	0.83	-1.6
2,987,522	+		ABCV34_RS14090	0.83	-1.7
2,987,523	-		ABCV34_RS14090	0.83	-1.5
2,987,607	+		ABCV34_RS14090	0.86	-1.6
2,987,607	+		ABCV34_RS14090	0.86	-2.4
2,987,607	+		ABCV34_RS14090	0.86	-0.3
2,987,608	-		ABCV34_RS14090	0.86	-1.3
2,987,608	-		ABCV34_RS14090	0.86	-1.2
2,987,608	-		ABCV34_RS14090	0.86	-1.8
2,987,609	+		ABCV34_RS14090	0.86	-1.6
2,987,609	+		ABCV34_RS14090	0.86	-1.7
2,987,609	+		ABCV34_RS14090	0.86	-1.4
2,987,609	+		ABCV34_RS14090	0.86	-1.8
2,987,609	+		ABCV34_RS14090	0.86	-1.8
2,987,609	+		ABCV34_RS14090	0.86	-1.4
2,987,610	-		ABCV34_RS14090	0.86	-1.2
2,987,610	-		ABCV34_RS14090	0.86	-1.6
2,987,610	-		ABCV34_RS14090	0.86	-2.4
2,987,610	-		ABCV34_RS14090	0.86	-1.1
2,987,610	-		ABCV34_RS14090	0.86	-1.5
2,987,610	-		ABCV34_RS14090	0.86	-1.4
2,987,678	+		ABCV34_RS14090	0.89	-1.6
2,987,678	+		ABCV34_RS14090	0.89	-0.9
2,987,679	-		ABCV34_RS14090	0.89	-0.8
2,987,679	-		ABCV34_RS14090	0.89	-1.7
2,987,679	-		ABCV34_RS14090	0.89	-2.4
2,987,681	+		ABCV34_RS14090	0.89	-1.2
2,987,681	+		ABCV34_RS14090	0.89	-1.5
2,987,682	-		ABCV34_RS14090	0.89	-1.5
2,987,682	-		ABCV34_RS14090	0.89	-2.5
2,987,682	-		ABCV34_RS14090	0.89	-2.4
2,987,682	-		ABCV34_RS14090	0.89	-1.4
2,987,837	+				-1.3
2,987,837	+				-1.5
2,987,837	+				-2.2
2,987,837	+				-1.1
2,987,837	+				-1.8
2,987,837	+				-2.2
2,987,837	+				-3.1
2,987,837	+				-0.7
2,987,837	+				-2.4
2,987,837	+				-1.6
2,987,837	+				-1.7
2,987,837	+				-1.4
2,987,838	-				-0.6
2,987,838	-				-1.5
2,987,838	-				-1.2
2,987,838	-				-1.8
2,987,838	-				-1.3
2,987,838	-				-1.3
2,987,838	-				-1.3
2,987,838	-				-1.2
2,987,838	-				-1.7
2,987,838	-				-2.1
2,987,838	-				-2.2
2,987,838	-				-1.6
2,987,858	+				-3.1
2,987,858	+				-1.6
2,987,858	+				-1.7
2,987,858	+				-0.1
2,987,858	+				-2.6
2,987,858	+				+0.9
2,987,858	+				-2.0
2,987,858	+				-1.6
2,987,858	+				-0.5
2,987,858	+				-1.7
2,987,858	+				-1.5
2,987,858	+				-1.9
2,987,858	+				-2.6
2,987,859	-				-0.9
2,987,859	-				-1.7
2,987,859	-				+0.6
2,987,859	-				-0.9
2,987,859	-				-1.9
2,987,859	-				-1.1
2,987,859	-				-1.5
2,988,066	+				-2.0
2,988,066	+				-2.2
2,988,066	+				-0.4
2,988,066	+				-1.3
2,988,066	+				-0.8
2,988,067	-				-1.9
2,988,067	-				-1.8
2,988,067	-				-1.8
2,988,067	-				-1.7
2,988,067	-				-0.1
2,988,067	-				-1.5
2,988,067	-				-2.0
2,988,080	+				-2.1
2,988,080	+				-1.1
2,988,080	+				-0.9
2,988,081	-				-0.1
2,988,081	-				-1.1
2,988,110	+				-3.7
2,988,110	+				-1.8
2,988,110	+				-1.5
2,988,110	+				-1.8
2,988,111	-				-1.4
2,988,111	-				-2.0
2,988,111	-				-2.3
2,988,172	+				-0.9
2,988,172	+				-2.5
2,988,172	+				-1.5
2,988,172	+				-0.8
2,988,172	+				-1.3
2,988,172	+				-1.6
2,988,173	-				-2.0
2,988,173	-				-1.1
2,988,173	-				-1.6
2,988,173	-				-3.0
2,988,173	-				-2.1
2,988,280	+				-1.4
2,988,280	+				-2.1
2,988,280	+				-1.4
2,988,281	-				-1.8
2,988,370	+		ABCV34_RS14095	0.13	-1.2
2,988,370	+		ABCV34_RS14095	0.13	-1.0
2,988,370	+		ABCV34_RS14095	0.13	-1.5
2,988,370	+		ABCV34_RS14095	0.13	-2.0
2,988,370	+		ABCV34_RS14095	0.13	-1.6
2,988,370	+		ABCV34_RS14095	0.13	-1.4
2,988,370	+		ABCV34_RS14095	0.13	-1.4
2,988,370	+		ABCV34_RS14095	0.13	-1.2
2,988,370	+		ABCV34_RS14095	0.13	-0.7
2,988,371	-		ABCV34_RS14095	0.13	-2.4
2,988,371	-		ABCV34_RS14095	0.13	-2.2
2,988,371	-		ABCV34_RS14095	0.13	-2.1
2,988,371	-		ABCV34_RS14095	0.13	-1.2
2,988,371	-		ABCV34_RS14095	0.13	-2.3
2,988,371	-		ABCV34_RS14095	0.13	-0.5
2,988,371	-		ABCV34_RS14095	0.13	-1.3
2,988,371	-		ABCV34_RS14095	0.13	-1.9
2,988,371	-		ABCV34_RS14095	0.13	-1.8
2,988,538	+		ABCV34_RS14095	0.27	-1.4
2,988,538	+		ABCV34_RS14095	0.27	-2.3
2,988,539	-		ABCV34_RS14095	0.27	-1.8
2,988,539	-		ABCV34_RS14095	0.27	-1.9
2,988,539	-		ABCV34_RS14095	0.27	-2.9
2,988,687	+		ABCV34_RS14095	0.39	-2.8
2,988,687	+		ABCV34_RS14095	0.39	-2.0
2,988,898	+		ABCV34_RS14095	0.56	-1.6
2,988,898	+		ABCV34_RS14095	0.56	-1.4
2,988,898	+		ABCV34_RS14095	0.56	-1.4