Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS11170

Experiment: Anaerobic; Cobalt chloride 2 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; Cobalt chloride 2 uM
2,381,704	+		ABCV34_RS11160	0.29	-2.0
2,381,767	+		ABCV34_RS11160	0.42	-1.8
2,381,768	-		ABCV34_RS11160	0.42	-2.2
2,381,768	-		ABCV34_RS11160	0.42	-1.2
2,381,768	-		ABCV34_RS11160	0.42	-1.5
2,381,769	+		ABCV34_RS11160	0.42	+0.2
2,381,769	+		ABCV34_RS11160	0.42	-1.9
2,381,769	+		ABCV34_RS11160	0.42	-1.7
2,381,769	+		ABCV34_RS11160	0.42	-0.4
2,381,770	-		ABCV34_RS11160	0.42	-0.5
2,381,770	-		ABCV34_RS11160	0.42	-0.6
2,381,770	-		ABCV34_RS11160	0.42	-1.4
2,381,770	-		ABCV34_RS11160	0.42	-1.2
2,381,770	-		ABCV34_RS11160	0.42	-1.3
2,381,770	-		ABCV34_RS11160	0.42	-1.1
2,381,808	+		ABCV34_RS11160	0.50	-1.2
2,381,808	+		ABCV34_RS11160	0.50	-0.8
2,382,078	+				+0.1
2,382,078	+				+0.2
2,382,078	+				-1.0
2,382,078	+				-2.0
2,382,078	+				-1.9
2,382,078	+				-0.7
2,382,078	+				-0.7
2,382,078	+				-1.8
2,382,078	+				-1.7
2,382,099	-				-1.4
2,382,099	-				-2.2
2,382,210	+		ABCV34_RS11165	0.13	-1.1
2,382,210	+		ABCV34_RS11165	0.13	-1.4
2,382,210	+		ABCV34_RS11165	0.13	-1.6
2,382,210	+		ABCV34_RS11165	0.13	-2.3
2,382,210	+		ABCV34_RS11165	0.13	-1.4
2,382,211	-		ABCV34_RS11165	0.13	-1.3
2,382,211	-		ABCV34_RS11165	0.13	-1.6
2,382,211	-		ABCV34_RS11165	0.13	-1.4
2,382,211	-		ABCV34_RS11165	0.13	-1.3
2,383,070	-				-2.5
2,383,093	+				-2.9
2,383,093	+				-2.0
2,383,093	+				-2.6
2,383,093	+				-2.2
2,383,093	+				-2.7
2,383,093	+				-1.1
2,383,094	-				-1.5
2,383,094	-				-1.4
2,383,094	-				-1.9
2,383,094	-				-2.3
2,383,094	-				-1.6
2,383,094	-				-1.2
2,383,094	-				-2.2
2,383,148	+				-3.0
2,383,148	+				-1.4
2,383,148	+				-0.3
2,383,148	+				-1.7
2,383,148	+				-1.2
2,383,148	+				-1.7
2,383,148	+				-1.4
2,383,149	-				-1.7
2,383,149	-				-1.1
2,383,149	-				-1.2
2,383,149	-				-1.5
2,383,194	-		ABCV34_RS11175	0.16	-1.6
2,383,194	-		ABCV34_RS11175	0.16	-0.4
2,383,194	-		ABCV34_RS11175	0.16	-3.3
2,383,194	-		ABCV34_RS11175	0.16	-1.4
2,383,202	-		ABCV34_RS11175	0.18	-1.1
2,383,202	-		ABCV34_RS11175	0.18	-0.7
2,383,202	-		ABCV34_RS11175	0.18	-2.0
2,383,202	-		ABCV34_RS11175	0.18	-0.6
2,383,202	-		ABCV34_RS11175	0.18	-1.2
2,383,471	+		ABCV34_RS11175	0.67	-1.8
2,383,472	-		ABCV34_RS11175	0.67	-1.4
2,383,540	+		ABCV34_RS11175	0.79	-1.3
2,383,541	-		ABCV34_RS11175	0.80	-1.3
2,383,582	+		ABCV34_RS11175	0.87	-2.0
2,383,582	+		ABCV34_RS11175	0.87	-2.3
2,383,582	+		ABCV34_RS11175	0.87	-1.6
2,383,582	+		ABCV34_RS11175	0.87	-2.2
2,383,583	-		ABCV34_RS11175	0.87	-0.7
2,383,583	-		ABCV34_RS11175	0.87	-1.4
2,383,583	-		ABCV34_RS11175	0.87	-1.3
2,383,583	-		ABCV34_RS11175	0.87	-1.2
2,383,625	+				-1.6
2,383,740	+				-2.0
2,383,740	+				-1.0
2,383,740	+				-1.0
2,383,740	+				-1.8
2,383,740	+				-0.9
2,383,740	+				-0.9
2,383,740	+				-1.5
2,383,741	-				-1.1
2,383,741	-				-2.0
2,383,741	-				-1.7
2,383,741	-				-1.4
2,383,741	-				-1.3
2,383,741	-				-1.0
2,383,741	-				-2.0
2,383,741	-				-1.6
2,383,741	-				-1.7
2,383,741	-				-2.0
2,383,741	-				-1.6
2,383,741	-				-0.8
2,383,741	-				-1.8
2,383,741	-				-1.6
2,383,741	-				-1.4
2,383,741	-				-1.1
2,383,748	+				-0.4
2,383,807	-				-3.5