Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS06830

Experiment: Anaerobic; Nickel (II) chloride 20 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; Nickel (II) chloride 20 uM
1,473,618	-				-2.5
1,473,618	-				-3.4
1,473,618	-				-4.1
1,473,618	-				-3.0
1,473,618	-				-4.1
1,473,618	-				-3.5
1,473,628	-				-1.4
1,473,628	-				-2.9
1,473,628	-				-1.8
1,473,628	-				-1.6
1,473,628	-				-3.0
1,473,628	-				-0.0
1,473,628	-				-1.6
1,473,628	-				-1.5
1,473,628	-				-4.9
1,473,628	-				-3.3
1,473,628	-				-3.3
1,473,628	-				-4.7
1,473,628	-				-2.6
1,474,013	+		ABCV34_RS06830	0.17	-2.4
1,474,013	+		ABCV34_RS06830	0.17	-2.5
1,474,013	+		ABCV34_RS06830	0.17	-1.6
1,474,014	-		ABCV34_RS06830	0.17	-2.0
1,474,014	-		ABCV34_RS06830	0.17	-2.2
1,474,014	-		ABCV34_RS06830	0.17	-2.2
1,474,014	-		ABCV34_RS06830	0.17	+1.0
1,474,086	+		ABCV34_RS06830	0.22	-2.6
1,474,086	+		ABCV34_RS06830	0.22	-2.0
1,474,087	-		ABCV34_RS06830	0.22	-1.7
1,474,087	-		ABCV34_RS06830	0.22	-1.7
1,474,121	+		ABCV34_RS06830	0.25	-1.2
1,474,121	+		ABCV34_RS06830	0.25	-1.6
1,474,121	+		ABCV34_RS06830	0.25	-3.2
1,474,121	+		ABCV34_RS06830	0.25	-2.5
1,474,121	+		ABCV34_RS06830	0.25	-1.9
1,474,121	+		ABCV34_RS06830	0.25	-2.8
1,474,121	+		ABCV34_RS06830	0.25	-1.0
1,474,121	+		ABCV34_RS06830	0.25	-2.0
1,474,122	-		ABCV34_RS06830	0.25	-2.4
1,474,122	-		ABCV34_RS06830	0.25	-2.0
1,474,122	-		ABCV34_RS06830	0.25	-1.6
1,474,122	-		ABCV34_RS06830	0.25	-1.5
1,474,122	-		ABCV34_RS06830	0.25	-1.6
1,474,122	-		ABCV34_RS06830	0.25	-1.6
1,474,122	-		ABCV34_RS06830	0.25	-1.5
1,474,236	+		ABCV34_RS06830	0.33	-2.0
1,474,237	-		ABCV34_RS06830	0.33	-2.4
1,474,238	+		ABCV34_RS06830	0.33	-1.0
1,474,238	+		ABCV34_RS06830	0.33	-3.1
1,474,238	+		ABCV34_RS06830	0.33	-1.0
1,474,238	+		ABCV34_RS06830	0.33	-2.4
1,474,239	-		ABCV34_RS06830	0.33	-1.5
1,474,239	-		ABCV34_RS06830	0.33	-1.7
1,474,239	-		ABCV34_RS06830	0.33	-1.8
1,474,239	-		ABCV34_RS06830	0.33	-1.2
1,474,239	-		ABCV34_RS06830	0.33	-1.6
1,474,239	-		ABCV34_RS06830	0.33	-2.8
1,474,259	+		ABCV34_RS06830	0.34	-2.2
1,474,259	+		ABCV34_RS06830	0.34	-1.6
1,474,259	+		ABCV34_RS06830	0.34	-1.6
1,474,259	+		ABCV34_RS06830	0.34	-2.9
1,474,259	+		ABCV34_RS06830	0.34	-1.6
1,474,259	+		ABCV34_RS06830	0.34	-3.2
1,474,259	+		ABCV34_RS06830	0.34	-1.7
1,474,259	+		ABCV34_RS06830	0.34	-2.5
1,474,259	+		ABCV34_RS06830	0.34	-1.3
1,474,259	+		ABCV34_RS06830	0.34	-1.8
1,474,259	+		ABCV34_RS06830	0.34	-1.4
1,474,259	+		ABCV34_RS06830	0.34	-2.6
1,474,259	+		ABCV34_RS06830	0.34	-2.7
1,474,260	-		ABCV34_RS06830	0.34	-2.4
1,474,260	-		ABCV34_RS06830	0.34	-2.2
1,474,260	-		ABCV34_RS06830	0.34	-3.0
1,474,260	-		ABCV34_RS06830	0.34	-2.7
1,474,260	-		ABCV34_RS06830	0.34	-1.6
1,474,260	-		ABCV34_RS06830	0.34	-1.6
1,474,260	-		ABCV34_RS06830	0.34	-2.4
1,474,260	-		ABCV34_RS06830	0.34	-3.3
1,474,260	-		ABCV34_RS06830	0.34	-1.9
1,474,316	+		ABCV34_RS06830	0.38	-2.4
1,474,316	+		ABCV34_RS06830	0.38	-2.4
1,474,316	+		ABCV34_RS06830	0.38	-2.0
1,474,316	+		ABCV34_RS06830	0.38	-0.5
1,474,316	+		ABCV34_RS06830	0.38	-3.0
1,474,316	+		ABCV34_RS06830	0.38	-2.5
1,474,316	+		ABCV34_RS06830	0.38	-2.6
1,474,316	+		ABCV34_RS06830	0.38	-2.6
1,474,317	-		ABCV34_RS06830	0.39	-2.4
1,474,317	-		ABCV34_RS06830	0.39	-1.3
1,474,317	-		ABCV34_RS06830	0.39	-1.8
1,474,317	-		ABCV34_RS06830	0.39	+0.5
1,474,317	-		ABCV34_RS06830	0.39	-2.5
1,474,317	-		ABCV34_RS06830	0.39	-0.5
1,474,317	-		ABCV34_RS06830	0.39	-2.4
1,474,364	+		ABCV34_RS06830	0.42	-2.6
1,474,364	+		ABCV34_RS06830	0.42	-1.4
1,474,365	-		ABCV34_RS06830	0.42	-0.8
1,474,365	-		ABCV34_RS06830	0.42	-1.7
1,474,365	-		ABCV34_RS06830	0.42	-2.0
1,474,589	+		ABCV34_RS06830	0.58	-3.2
1,474,590	-		ABCV34_RS06830	0.58	-3.7
1,474,590	-		ABCV34_RS06830	0.58	-1.5
1,474,799	+		ABCV34_RS06830	0.73	-2.4
1,474,799	+		ABCV34_RS06830	0.73	-3.2
1,474,799	+		ABCV34_RS06830	0.73	-1.9
1,474,800	-		ABCV34_RS06830	0.73	-1.4
1,474,999	-		ABCV34_RS06830	0.87	-2.7
1,475,002	+		ABCV34_RS06830	0.88	-3.5
1,475,002	+		ABCV34_RS06830	0.88	-2.4
1,475,028	+		ABCV34_RS06830	0.89	-1.0
1,475,028	+		ABCV34_RS06830	0.89	-3.1
1,475,028	+		ABCV34_RS06830	0.89	-3.0
1,475,028	+		ABCV34_RS06830	0.89	-0.8
1,475,028	+		ABCV34_RS06830	0.89	-2.4
1,475,028	+		ABCV34_RS06830	0.89	+0.7
1,475,028	+		ABCV34_RS06830	0.89	-2.0
1,475,029	-		ABCV34_RS06830	0.89	-2.3
1,475,029	-		ABCV34_RS06830	0.89	-0.9
1,475,029	-		ABCV34_RS06830	0.89	-1.7
1,475,029	-		ABCV34_RS06830	0.89	-2.7
1,475,029	-		ABCV34_RS06830	0.89	+0.4
1,475,037	+				-2.8
1,475,057	+				-3.9
1,475,057	+				-0.7
1,475,057	+				-2.0
1,475,058	-				-0.7
1,475,058	-				-3.2
1,475,058	-				-2.8
1,475,058	-				-1.0
1,475,175	+				-2.9
1,475,175	+				-0.0
1,475,175	+				-2.0
1,475,175	+				-2.7
1,475,175	+				-2.3
1,475,175	+				-2.2
1,475,175	+				-3.2
1,475,175	+				-1.9
1,475,175	+				-2.4
1,475,175	+				-2.7
1,475,176	-				-1.6
1,475,176	-				-1.6
1,475,176	-				-2.9
1,475,176	-				-2.4
1,475,176	-				-4.2
1,475,176	-				-4.1
1,475,176	-				-2.6
1,475,176	-				-1.0
1,475,176	-				-3.0
1,475,176	-				-2.2
1,475,176	-				-4.0
1,475,176	-				-3.8
1,475,176	-				-1.6
1,475,176	-				-0.0
1,475,176	-				-0.8
1,475,176	-				-0.0
1,475,231	-				-3.0
1,475,243	+				-2.0
1,475,258	+				-2.0
1,475,258	+				-2.9
1,475,259	-				-3.2
1,475,259	-				-2.0
1,475,265	+				-4.4
1,475,265	+				-1.6
1,475,266	-				-3.1
1,475,279	+				-2.5
1,475,279	+				-2.6
1,475,279	+				-2.4
1,475,280	-				-3.4
1,475,280	-				-2.6
1,475,280	-				-2.9
1,475,280	-				-2.0
1,475,280	-				-2.9
1,475,280	-				-2.4
1,475,280	-				-1.0
1,475,284	+				-2.0
1,475,284	+				-0.6
1,475,284	+				-3.0
1,475,285	-				-3.6
1,475,285	-				-3.5
1,475,371	+				-2.2
1,475,371	+				-3.2
1,475,372	-				-2.0
1,475,372	-				-2.4
1,475,372	-				-2.6
1,475,384	+				-3.0
1,475,385	-				-3.0
1,475,385	-				-4.0
1,475,385	-				-3.5
1,475,385	-				-4.0
1,475,401	+				-0.5
1,475,401	+				-1.0
1,475,401	+				-1.6
1,475,401	+				-2.0
1,475,401	+				-2.0
1,475,401	+				-2.8
1,475,401	+				-1.4
1,475,401	+				-2.6
1,475,401	+				-1.5
1,475,402	-				-3.0
1,475,402	-				-1.0
1,475,402	-				-1.0
1,475,402	-				-0.6
1,475,402	-				-0.0
1,475,402	-				-2.4
1,475,403	+				-3.0
1,475,403	+				-6.0
1,475,403	+				-5.8
1,475,403	+				-4.0
1,475,404	-				-4.3
1,475,404	-				-2.9
1,475,404	-				-5.6
1,475,444	-				-2.4
1,475,456	+				-4.9
1,475,456	+				-4.8
1,475,456	+				-2.6
1,475,456	+				-5.6
1,475,456	+				-4.3
1,475,456	+				-5.2
1,475,456	+				-2.6
1,475,456	+				-3.2
1,475,457	-				-2.0
1,475,457	-				-0.0
1,475,457	-				-5.0
1,475,457	-				-3.2
1,475,457	-				-3.7
1,475,458	+				-3.4
1,475,458	+				-2.9
1,475,458	+				-4.5
1,475,458	+				-5.6
1,475,458	+				-5.1
1,475,458	+				-2.4
1,475,458	+				-4.2
1,475,458	+				-4.5
1,475,458	+				-5.3
1,475,458	+				-6.3
1,475,458	+				-5.8
1,475,458	+				-4.3
1,475,458	+				-7.5
1,475,458	+				-3.0
1,475,458	+				-7.0
1,475,458	+				-5.6
1,475,458	+				-5.2
1,475,458	+				-5.3
1,475,459	-				-3.6
1,475,459	-				-5.0
1,475,459	-				-0.6
1,475,459	-				-2.4
1,475,459	-				-0.6
1,475,459	-				-2.4
1,475,459	-				-5.1
1,475,459	-				-3.0
1,475,459	-				-4.3
1,475,459	-				-3.2
1,475,459	-				-1.8
1,475,461	-				-3.7
1,475,645	-		ABCV34_RS06835	0.19	-0.0
1,475,665	-		ABCV34_RS06835	0.22	-3.6
1,475,665	-		ABCV34_RS06835	0.22	-0.0
1,475,694	+		ABCV34_RS06835	0.26	-4.1
1,475,694	+		ABCV34_RS06835	0.26	-3.7
1,475,694	+		ABCV34_RS06835	0.26	-6.3
1,475,694	+		ABCV34_RS06835	0.26	-6.9
1,475,694	+		ABCV34_RS06835	0.26	-4.0
1,475,694	+		ABCV34_RS06835	0.26	-4.7
1,475,694	+		ABCV34_RS06835	0.26	-5.5
1,475,694	+		ABCV34_RS06835	0.26	-4.7
1,475,694	+		ABCV34_RS06835	0.26	-5.6
1,475,694	+		ABCV34_RS06835	0.26	-6.0
1,475,694	+		ABCV34_RS06835	0.26	-6.3
1,475,694	+		ABCV34_RS06835	0.26	-4.2
1,475,694	+		ABCV34_RS06835	0.26	-4.5
1,475,695	-		ABCV34_RS06835	0.26	-2.9
1,475,695	-		ABCV34_RS06835	0.26	-2.0
1,475,695	-		ABCV34_RS06835	0.26	-2.9
1,475,695	-		ABCV34_RS06835	0.26	-3.0
1,475,695	-		ABCV34_RS06835	0.26	-2.6
1,475,695	-		ABCV34_RS06835	0.26	-3.6
1,475,695	-		ABCV34_RS06835	0.26	-1.6
1,475,765	+		ABCV34_RS06835	0.35	-3.4
1,475,765	+		ABCV34_RS06835	0.35	-4.6
1,475,765	+		ABCV34_RS06835	0.35	-5.1
1,475,765	+		ABCV34_RS06835	0.35	-4.5
1,475,766	-		ABCV34_RS06835	0.35	-3.6
1,475,766	-		ABCV34_RS06835	0.35	-1.6
1,476,040	+		ABCV34_RS06835	0.73	-4.7
1,476,040	+		ABCV34_RS06835	0.73	-4.4
1,476,040	+		ABCV34_RS06835	0.73	-4.0
1,476,040	+		ABCV34_RS06835	0.73	-4.0
1,476,041	-		ABCV34_RS06835	0.73	-2.9