Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS13360

Experiment: Anaerobic; Nickel (II) chloride 20 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; Nickel (II) chloride 20 uM
2,830,546	+		ABCV34_RS13355	0.82	-1.3
2,830,579	+		ABCV34_RS13355	0.86	-1.9
2,830,579	+		ABCV34_RS13355	0.86	-2.2
2,830,579	+		ABCV34_RS13355	0.86	-1.8
2,830,580	-		ABCV34_RS13355	0.86	-2.2
2,830,580	-		ABCV34_RS13355	0.86	-2.3
2,830,580	-		ABCV34_RS13355	0.86	-2.3
2,830,580	-		ABCV34_RS13355	0.86	-0.9
2,830,585	+		ABCV34_RS13355	0.87	-1.7
2,830,585	+		ABCV34_RS13355	0.87	-2.4
2,830,586	-		ABCV34_RS13355	0.87	-1.8
2,830,586	-		ABCV34_RS13355	0.87	-2.3
2,830,586	-		ABCV34_RS13355	0.87	-2.2
2,830,703	+				-1.4
2,830,839	-				-2.8
2,830,839	-				-2.8
2,830,839	-				-2.2
2,831,035	+				-1.5
2,831,078	+				-2.6
2,831,078	+				-1.9
2,831,078	+				-0.4
2,831,078	+				-0.6
2,831,078	+				-2.0
2,831,078	+				-1.5
2,831,078	+				-2.4
2,831,078	+				-2.8
2,831,078	+				-3.1
2,831,078	+				-1.7
2,831,078	+				-1.9
2,831,078	+				-3.5
2,831,078	+				-1.6
2,831,078	+				-0.8
2,831,078	+				-3.1
2,831,078	+				-2.6
2,831,078	+				-2.0
2,831,078	+				-1.5
2,831,078	+				-2.1
2,831,078	+				-3.7
2,831,078	+				-2.2
2,831,078	+				-3.5
2,831,078	+				-2.0
2,831,078	+				-2.7
2,831,078	+				-0.7
2,831,079	-				-1.7
2,831,079	-				-2.5
2,831,079	-				-1.2
2,831,079	-				-2.1
2,831,079	-				-2.8
2,831,079	-				-2.3
2,831,079	-				-2.6
2,831,079	-				-2.3
2,831,079	-				-1.3
2,831,079	-				-2.8
2,831,079	-				-2.0
2,831,122	+				-2.1
2,831,163	+				-3.6
2,831,268	+				-2.3
2,831,268	+				-1.8
2,831,325	+				-4.0
2,831,325	+				-0.8
2,831,349	+				-1.3
2,831,349	+				-0.2
2,831,349	+				-1.3
2,831,349	+				-2.0
2,831,349	+				-1.4
2,831,349	+				-0.3
2,831,349	+				-2.9
2,831,350	-				-1.4
2,831,350	-				-2.0
2,831,350	-				-2.3
2,831,350	-				-3.1
2,831,350	-				-1.7
2,831,350	-				-2.5
2,831,350	-				-3.8
2,831,350	-				-1.9
2,831,429	-				-2.2
2,831,429	-				-3.2
2,831,429	-				-1.5
2,831,477	+				-2.2
2,831,496	-				-1.6
2,831,509	+				-1.4
2,831,509	+				-1.5
2,831,509	+				-3.2
2,831,510	-				-2.5
2,831,510	-				-2.5
2,831,622	+		ABCV34_RS13360	0.13	-4.0
2,831,622	+		ABCV34_RS13360	0.13	-1.4
2,831,622	+		ABCV34_RS13360	0.13	-2.0
2,831,622	+		ABCV34_RS13360	0.13	-1.2
2,831,623	-		ABCV34_RS13360	0.13	-3.0
2,831,623	-		ABCV34_RS13360	0.13	-2.6
2,831,736	+		ABCV34_RS13360	0.28	-3.9
2,831,736	+		ABCV34_RS13360	0.28	-2.9
2,831,737	-		ABCV34_RS13360	0.28	-2.2
2,831,898	+		ABCV34_RS13360	0.48	-2.2
2,831,898	+		ABCV34_RS13360	0.48	-1.4
2,831,898	+		ABCV34_RS13360	0.48	-1.9
2,831,898	+		ABCV34_RS13360	0.48	-2.1
2,831,898	+		ABCV34_RS13360	0.48	-2.2
2,831,899	-		ABCV34_RS13360	0.49	-1.7
2,831,899	-		ABCV34_RS13360	0.49	-2.2
2,831,995	-		ABCV34_RS13360	0.61	-1.0
2,831,995	-		ABCV34_RS13360	0.61	-2.6
2,832,065	+		ABCV34_RS13360	0.70	-3.2
2,832,066	-		ABCV34_RS13360	0.70	-2.5
2,832,297	+				-1.7
2,832,379	-				-2.6
2,832,438	-				-3.3
2,832,438	-				-2.2
2,832,505	+				-2.4
2,832,505	+				-3.7
2,832,505	+				-3.5
2,832,505	+				-1.8
2,832,505	+				-2.4
2,832,505	+				-4.3
2,832,505	+				-2.9
2,832,505	+				-3.7
2,832,505	+				-0.8
2,832,505	+				-2.4
2,832,505	+				-2.9
2,832,505	+				-3.6
2,832,505	+				-3.0
2,832,505	+				-2.8
2,832,505	+				-3.2
2,832,505	+				-3.2
2,832,505	+				-4.5
2,832,505	+				-2.8
2,832,505	+				-2.2
2,832,505	+				-4.1
2,832,505	+				-3.9
2,832,506	-				-2.5
2,832,506	-				-3.6
2,832,506	-				-2.1
2,832,506	-				-3.0
2,832,506	-				-3.3
2,832,506	-				-3.7
2,832,506	-				-2.8
2,832,506	-				-2.8
2,832,506	-				-4.0
2,832,506	-				-3.2
2,832,506	-				-3.5
2,832,506	-				-3.3
2,832,506	-				-1.9
2,832,506	-				-3.4
2,832,506	-				-3.3
2,832,506	-				-4.2
2,832,506	-				-3.2
2,832,506	-				-2.2
2,832,506	-				-2.4
2,832,506	-				-3.3
2,832,507	+				-4.2
2,832,507	+				-3.4
2,832,507	+				-1.8
2,832,508	-				-2.8
2,832,508	-				-3.9
2,832,508	-				-2.9
2,832,508	-				-3.9
2,832,508	-				-4.0
2,832,515	+				-2.9
2,832,515	+				-2.1
2,832,515	+				-4.2
2,832,515	+				-3.9
2,832,515	+				-5.5
2,832,515	+				-2.2
2,832,515	+				-2.4
2,832,515	+				-3.4
2,832,516	-				-4.1
2,832,516	-				-4.2
2,832,516	-				-2.5
2,832,516	-				-2.3
2,832,516	-				-2.5
2,832,528	+				-1.4
2,832,528	+				-4.3
2,832,528	+				-3.9
2,832,529	-				-3.2
2,832,529	-				-2.8
2,832,802	+		ABCV34_RS13365	0.27	-3.9
2,832,802	+		ABCV34_RS13365	0.27	-3.4
2,832,802	+		ABCV34_RS13365	0.27	-2.4
2,832,803	-		ABCV34_RS13365	0.27	-2.6
2,832,803	-		ABCV34_RS13365	0.27	-4.1
2,832,803	-		ABCV34_RS13365	0.27	-4.3
2,832,803	-		ABCV34_RS13365	0.27	-3.5
2,832,803	-		ABCV34_RS13365	0.27	-2.4
2,832,803	-		ABCV34_RS13365	0.27	-3.0
2,832,803	-		ABCV34_RS13365	0.27	-1.8
2,832,803	-		ABCV34_RS13365	0.27	-3.2
2,832,849	+		ABCV34_RS13365	0.31	-3.4
2,832,849	+		ABCV34_RS13365	0.31	-2.6
2,832,849	+		ABCV34_RS13365	0.31	-3.2
2,832,849	+		ABCV34_RS13365	0.31	-3.7
2,832,849	+		ABCV34_RS13365	0.31	-2.5
2,832,849	+		ABCV34_RS13365	0.31	-3.6
2,832,849	+		ABCV34_RS13365	0.31	-4.0
2,832,849	+		ABCV34_RS13365	0.31	-3.4
2,832,849	+		ABCV34_RS13365	0.31	-2.9
2,832,850	-		ABCV34_RS13365	0.32	-2.8
2,832,850	-		ABCV34_RS13365	0.32	-4.3
2,832,850	-		ABCV34_RS13365	0.32	-3.6
2,832,850	-		ABCV34_RS13365	0.32	-2.5
2,832,850	-		ABCV34_RS13365	0.32	-4.9
2,832,850	-		ABCV34_RS13365	0.32	-1.4
2,832,850	-		ABCV34_RS13365	0.32	-2.8
2,832,850	-		ABCV34_RS13365	0.32	-1.8
2,832,850	-		ABCV34_RS13365	0.32	-3.6
2,832,964	+		ABCV34_RS13365	0.42	-2.3
2,832,964	+		ABCV34_RS13365	0.42	-2.8
2,832,964	+		ABCV34_RS13365	0.42	-2.1
2,832,964	+		ABCV34_RS13365	0.42	-2.6
2,832,965	-		ABCV34_RS13365	0.42	-4.9
2,832,965	-		ABCV34_RS13365	0.42	-1.0
2,832,965	-		ABCV34_RS13365	0.42	-0.8
2,832,965	-		ABCV34_RS13365	0.42	-3.3
2,832,965	-		ABCV34_RS13365	0.42	-3.8
2,832,965	-		ABCV34_RS13365	0.42	-3.8
2,833,078	+		ABCV34_RS13365	0.53	-3.5
2,833,079	-		ABCV34_RS13365	0.53	-3.2
2,833,090	+		ABCV34_RS13365	0.54	-3.7
2,833,090	+		ABCV34_RS13365	0.54	-2.5
2,833,090	+		ABCV34_RS13365	0.54	-2.9
2,833,090	+		ABCV34_RS13365	0.54	-3.7
2,833,091	-		ABCV34_RS13365	0.54	-4.0
2,833,091	-		ABCV34_RS13365	0.54	-3.2
2,833,091	-		ABCV34_RS13365	0.54	-4.8
2,833,091	-		ABCV34_RS13365	0.54	-2.3
2,833,091	-		ABCV34_RS13365	0.54	-4.8
2,833,114	+		ABCV34_RS13365	0.56	-1.8
2,833,114	+		ABCV34_RS13365	0.56	-4.3
2,833,114	+		ABCV34_RS13365	0.56	-4.0
2,833,114	+		ABCV34_RS13365	0.56	-3.4
2,833,114	+		ABCV34_RS13365	0.56	-3.5
2,833,114	+		ABCV34_RS13365	0.56	-4.0
2,833,114	+		ABCV34_RS13365	0.56	-2.7
2,833,114	+		ABCV34_RS13365	0.56	-2.2
2,833,115	-		ABCV34_RS13365	0.56	-2.5
2,833,115	-		ABCV34_RS13365	0.56	-3.7
2,833,115	-		ABCV34_RS13365	0.56	-3.3
2,833,115	-		ABCV34_RS13365	0.56	-3.2
2,833,115	-		ABCV34_RS13365	0.56	-2.8
2,833,115	-		ABCV34_RS13365	0.56	-4.0
2,833,115	-		ABCV34_RS13365	0.56	-3.7
2,833,115	-		ABCV34_RS13365	0.56	-3.5
2,833,115	-		ABCV34_RS13365	0.56	-2.9
2,833,115	-		ABCV34_RS13365	0.56	-3.2
2,833,115	-		ABCV34_RS13365	0.56	-2.4
2,833,115	-		ABCV34_RS13365	0.56	-1.6
2,833,141	+		ABCV34_RS13365	0.58	-3.3
2,833,141	+		ABCV34_RS13365	0.58	-2.3
2,833,141	+		ABCV34_RS13365	0.58	-2.9
2,833,141	+		ABCV34_RS13365	0.58	-2.2
2,833,141	+		ABCV34_RS13365	0.58	-1.8
2,833,141	+		ABCV34_RS13365	0.58	-4.2
2,833,141	+		ABCV34_RS13365	0.58	-2.2
2,833,141	+		ABCV34_RS13365	0.58	-2.0
2,833,141	+		ABCV34_RS13365	0.58	-3.5
2,833,141	+		ABCV34_RS13365	0.58	-3.6
2,833,142	-		ABCV34_RS13365	0.59	-3.3
2,833,142	-		ABCV34_RS13365	0.59	-2.5
2,833,142	-		ABCV34_RS13365	0.59	-2.1
2,833,150	+		ABCV34_RS13365	0.59	-3.3
2,833,171	+		ABCV34_RS13365	0.61	-3.7
2,833,172	-		ABCV34_RS13365	0.61	-3.5
2,833,172	-		ABCV34_RS13365	0.61	-3.1