Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS12775

Experiment: Anaerobic; Uranyl acetate 80 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; Uranyl acetate 80 uM
2,710,204	+				-0.8
2,710,205	-				-1.7
2,710,205	-				-2.3
2,710,205	-				-1.6
2,710,205	-				-1.1
2,710,257	-				-1.3
2,710,257	-				-2.9
2,710,257	-				-2.7
2,710,318	+				-1.3
2,710,319	-				-0.8
2,710,319	-				-2.0
2,710,397	+				-2.1
2,710,397	+				-2.2
2,710,397	+				-1.7
2,710,398	-				-1.8
2,710,398	-				-0.3
2,710,398	-				-2.3
2,710,398	-				-1.2
2,710,448	-				-1.9
2,710,479	-				-0.5
2,710,526	-				-1.4
2,710,532	+				-0.1
2,710,532	+				-1.3
2,710,532	+				-1.8
2,710,532	+				-2.0
2,710,532	+				-1.7
2,710,532	+				-1.6
2,710,532	+				-1.8
2,710,532	+				-1.7
2,710,532	+				-0.9
2,710,532	+				-1.2
2,710,533	-				-1.6
2,710,533	-				-3.1
2,710,533	-				-0.5
2,710,533	-				-1.4
2,710,533	-				-2.4
2,710,619	+		ABCV34_RS12765	0.27	-1.9
2,710,619	+		ABCV34_RS12765	0.27	-1.2
2,710,620	-		ABCV34_RS12765	0.27	-1.6
2,710,620	-		ABCV34_RS12765	0.27	-2.4
2,710,620	-		ABCV34_RS12765	0.27	-0.8
2,710,620	-		ABCV34_RS12765	0.27	-2.3
2,710,634	+		ABCV34_RS12765	0.34	-2.0
2,710,634	+		ABCV34_RS12765	0.34	-2.5
2,710,634	+		ABCV34_RS12765	0.34	-1.4
2,710,634	+		ABCV34_RS12765	0.34	-1.5
2,710,634	+		ABCV34_RS12765	0.34	-2.6
2,710,634	+		ABCV34_RS12765	0.34	-2.0
2,710,635	-		ABCV34_RS12765	0.34	-1.5
2,710,635	-		ABCV34_RS12765	0.34	-3.1
2,710,635	-		ABCV34_RS12765	0.34	-1.4
2,710,635	-		ABCV34_RS12765	0.34	-0.8
2,710,636	+		ABCV34_RS12765	0.35	-1.7
2,710,636	+		ABCV34_RS12765	0.35	-0.6
2,710,637	-		ABCV34_RS12765	0.35	-3.6
2,710,637	-		ABCV34_RS12765	0.35	-1.6
2,710,637	-		ABCV34_RS12765	0.35	-0.9
2,710,637	-		ABCV34_RS12765	0.35	-0.6
2,710,645	+		ABCV34_RS12765	0.39	-1.7
2,710,646	-		ABCV34_RS12765	0.39	+0.9
2,710,646	-		ABCV34_RS12765	0.39	-3.6
2,710,679	-		ABCV34_RS12765	0.54	-1.8
2,710,692	+		ABCV34_RS12765	0.60	-1.5
2,710,692	+		ABCV34_RS12765	0.60	-1.1
2,710,692	+		ABCV34_RS12765	0.60	-2.1
2,710,692	+		ABCV34_RS12765	0.60	-1.9
2,710,692	+		ABCV34_RS12765	0.60	-0.9
2,710,693	-		ABCV34_RS12765	0.61	-2.2
2,710,727	+		ABCV34_RS12765	0.76	-1.1
2,710,727	+		ABCV34_RS12765	0.76	-1.6
2,710,727	+		ABCV34_RS12765	0.76	-2.1
2,710,728	-		ABCV34_RS12765	0.77	+1.5
2,710,728	-		ABCV34_RS12765	0.77	+0.2
2,710,735	+		ABCV34_RS12765	0.80	-1.5
2,710,746	+				-1.2
2,710,747	-				-2.4
2,710,804	+		ABCV34_RS12770	0.20	-0.5
2,710,877	+		ABCV34_RS12770	0.42	-1.7
2,710,877	+		ABCV34_RS12770	0.42	-1.1
2,710,877	+		ABCV34_RS12770	0.42	-1.7
2,710,877	+		ABCV34_RS12770	0.42	-2.1
2,710,878	-		ABCV34_RS12770	0.43	-1.1
2,710,901	+		ABCV34_RS12770	0.50	-2.3
2,710,901	+		ABCV34_RS12770	0.50	-1.9
2,710,901	+		ABCV34_RS12770	0.50	-1.7
2,710,901	+		ABCV34_RS12770	0.50	-2.0
2,710,901	+		ABCV34_RS12770	0.50	-2.0
2,710,931	+		ABCV34_RS12770	0.59	-0.8
2,710,931	+		ABCV34_RS12770	0.59	-1.5
2,710,931	+		ABCV34_RS12770	0.59	-2.5
2,710,931	+		ABCV34_RS12770	0.59	-1.7
2,710,932	-		ABCV34_RS12770	0.60	-0.1
2,710,932	-		ABCV34_RS12770	0.60	-3.5
2,711,060	-				-0.8
2,711,131	+				-1.2
2,711,131	+				-1.6
2,711,132	-				-1.6
2,711,151	-				-1.8
2,711,157	-				-2.0
2,711,157	-				-1.2
2,711,160	+				-1.4
2,711,160	+				-1.5
2,711,161	-				-1.1
2,711,161	-				-1.6
2,711,161	-				-0.7
2,711,161	-				-1.4
2,711,454	-		ABCV34_RS12775	0.22	-1.4
2,711,473	+		ABCV34_RS12775	0.24	-1.5
2,711,473	+		ABCV34_RS12775	0.24	-1.9
2,711,473	+		ABCV34_RS12775	0.24	-1.5
2,711,474	-		ABCV34_RS12775	0.24	-1.8
2,711,474	-		ABCV34_RS12775	0.24	-0.6
2,711,474	-		ABCV34_RS12775	0.24	-1.8
2,711,474	-		ABCV34_RS12775	0.24	-1.8
2,711,474	-		ABCV34_RS12775	0.24	-1.5
2,711,474	-		ABCV34_RS12775	0.24	-0.1
2,711,740	+		ABCV34_RS12775	0.45	-2.1
2,711,761	+		ABCV34_RS12775	0.47	-1.3
2,711,761	+		ABCV34_RS12775	0.47	-1.3
2,711,761	+		ABCV34_RS12775	0.47	-1.7
2,711,761	+		ABCV34_RS12775	0.47	-1.7
2,711,762	-		ABCV34_RS12775	0.47	-1.6
2,711,762	-		ABCV34_RS12775	0.47	-2.2
2,711,762	-		ABCV34_RS12775	0.47	-1.8
2,711,762	-		ABCV34_RS12775	0.47	-0.1
2,711,762	-		ABCV34_RS12775	0.47	-1.6
2,711,903	+		ABCV34_RS12775	0.58	-1.7
2,712,064	+		ABCV34_RS12775	0.71	-1.5
2,712,064	+		ABCV34_RS12775	0.71	-1.7
2,712,065	-		ABCV34_RS12775	0.71	-1.5
2,712,065	-		ABCV34_RS12775	0.71	-1.5
2,712,065	-		ABCV34_RS12775	0.71	-1.2
2,712,065	-		ABCV34_RS12775	0.71	-4.3
2,712,067	+		ABCV34_RS12775	0.71	-2.4
2,712,067	+		ABCV34_RS12775	0.71	-1.5
2,712,067	+		ABCV34_RS12775	0.71	-1.6
2,712,067	+		ABCV34_RS12775	0.71	-1.6
2,712,067	+		ABCV34_RS12775	0.71	-2.0
2,712,067	+		ABCV34_RS12775	0.71	-1.6
2,712,067	+		ABCV34_RS12775	0.71	-0.8
2,712,067	+		ABCV34_RS12775	0.71	-1.5
2,712,067	+		ABCV34_RS12775	0.71	-1.8
2,712,068	-		ABCV34_RS12775	0.71	-2.0
2,712,068	-		ABCV34_RS12775	0.71	-1.6
2,712,068	-		ABCV34_RS12775	0.71	-1.6
2,712,068	-		ABCV34_RS12775	0.71	-1.7
2,712,068	-		ABCV34_RS12775	0.71	-2.0
2,712,355	+				-2.3
2,712,425	-				-1.7
2,712,490	+				-1.1
2,712,490	+				-1.3
2,712,491	-				-1.6
2,712,523	-				-2.0
2,712,523	-				-1.6
2,713,088	-		ABCV34_RS12780	0.45	-1.6
2,713,103	+		ABCV34_RS12780	0.46	-2.2
2,713,103	+		ABCV34_RS12780	0.46	-1.9
2,713,103	+		ABCV34_RS12780	0.46	-1.2
2,713,104	-		ABCV34_RS12780	0.46	-2.0
2,713,104	-		ABCV34_RS12780	0.46	-1.9
2,713,104	-		ABCV34_RS12780	0.46	-1.7
2,713,104	-		ABCV34_RS12780	0.46	-2.0
2,713,104	-		ABCV34_RS12780	0.46	-1.5
2,713,104	-		ABCV34_RS12780	0.46	-1.4
2,713,104	-		ABCV34_RS12780	0.46	-1.9
2,713,104	-		ABCV34_RS12780	0.46	-1.7