Strain Fitness in Rhodanobacter denitrificans MT42 around LRK55_RS10340

Experiment: R2A with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Metal_ion_mix_sitestressplate 2 x
2,276,749	-				+0.1
2,276,749	-				-2.0
2,276,773	+				+0.3
2,276,773	+				-0.1
2,276,773	+				-0.6
2,276,773	+				+0.1
2,276,774	-				-1.0
2,276,774	-				+1.1
2,276,985	+		LRK55_RS10335	0.18	-0.6
2,276,985	+		LRK55_RS10335	0.18	+0.1
2,276,985	+		LRK55_RS10335	0.18	-1.4
2,276,985	+		LRK55_RS10335	0.18	+0.1
2,276,985	+		LRK55_RS10335	0.18	-0.7
2,276,986	-		LRK55_RS10335	0.18	+0.5
2,276,986	-		LRK55_RS10335	0.18	-0.3
2,276,986	-		LRK55_RS10335	0.18	+0.3
2,276,986	-		LRK55_RS10335	0.18	+0.5
2,276,986	-		LRK55_RS10335	0.18	+1.3
2,276,986	-		LRK55_RS10335	0.18	-0.7
2,276,986	-		LRK55_RS10335	0.18	-0.6
2,276,986	-		LRK55_RS10335	0.18	+0.1
2,276,986	-		LRK55_RS10335	0.18	-0.5
2,277,312	+		LRK55_RS10335	0.60	-0.2
2,277,447	+		LRK55_RS10335	0.77	-0.1
2,277,447	+		LRK55_RS10335	0.77	-0.3
2,277,447	+		LRK55_RS10335	0.77	-1.1
2,277,448	-		LRK55_RS10335	0.78	-2.0
2,277,448	-		LRK55_RS10335	0.78	-0.6
2,277,448	-		LRK55_RS10335	0.78	-1.7
2,277,481	+		LRK55_RS10335	0.82	-0.8
2,277,481	+		LRK55_RS10335	0.82	-0.4
2,277,481	+		LRK55_RS10335	0.82	-0.2
2,277,482	-		LRK55_RS10335	0.82	-0.1
2,277,482	-		LRK55_RS10335	0.82	+0.2
2,277,482	-		LRK55_RS10335	0.82	-0.3
2,277,482	-		LRK55_RS10335	0.82	+1.3
2,277,664	+				-0.3
2,277,664	+				-0.0
2,277,664	+				-0.2
2,277,664	+				+2.8
2,277,664	+				+1.2
2,277,664	+				-0.0
2,277,664	+				-0.1
2,277,664	+				+0.0
2,277,664	+				+0.0
2,277,665	-				-1.9
2,277,665	-				-0.5
2,277,665	-				-1.3
2,277,665	-				-0.6
2,277,665	-				+0.2
2,277,665	-				+0.6
2,277,665	-				+0.0
2,277,728	-		LRK55_RS10340	0.15	-0.5
2,277,728	-		LRK55_RS10340	0.15	-0.6
2,277,728	-		LRK55_RS10340	0.15	+0.1
2,277,814	+		LRK55_RS10340	0.30	-0.6
2,277,814	+		LRK55_RS10340	0.30	+0.3
2,277,814	+		LRK55_RS10340	0.30	-0.3
2,277,823	+		LRK55_RS10340	0.31	-0.5
2,277,823	+		LRK55_RS10340	0.31	-0.2
2,277,824	-		LRK55_RS10340	0.31	+0.1
2,277,824	-		LRK55_RS10340	0.31	+0.1
2,277,824	-		LRK55_RS10340	0.31	-0.6
2,277,824	-		LRK55_RS10340	0.31	-0.9
2,277,941	-		LRK55_RS10340	0.51	-0.7
2,278,024	+		LRK55_RS10340	0.65	-1.0
2,278,024	+		LRK55_RS10340	0.65	-0.3
2,278,024	+		LRK55_RS10340	0.65	+0.4
2,278,025	-		LRK55_RS10340	0.66	-1.7
2,278,025	-		LRK55_RS10340	0.66	+1.4
2,278,025	-		LRK55_RS10340	0.66	-0.7
2,278,025	-		LRK55_RS10340	0.66	-0.3
2,278,025	-		LRK55_RS10340	0.66	+0.4
2,278,025	-		LRK55_RS10340	0.66	+0.0
2,278,159	+		LRK55_RS10340	0.88	+0.0
2,278,159	+		LRK55_RS10340	0.88	+0.4
2,278,159	+		LRK55_RS10340	0.88	+0.4
2,278,159	+		LRK55_RS10340	0.88	+0.0
2,278,159	+		LRK55_RS10340	0.88	+0.3
2,278,159	+		LRK55_RS10340	0.88	-0.8
2,278,159	+		LRK55_RS10340	0.88	+0.3
2,278,159	+		LRK55_RS10340	0.88	+0.4
2,278,160	-		LRK55_RS10340	0.89	+0.0
2,278,160	-		LRK55_RS10340	0.89	+0.2
2,278,160	-		LRK55_RS10340	0.89	+0.6
2,278,160	-		LRK55_RS10340	0.89	+0.5
2,278,160	-		LRK55_RS10340	0.89	+0.6
2,278,160	-		LRK55_RS10340	0.89	-0.7
2,278,160	-		LRK55_RS10340	0.89	-0.3
2,278,258	+				-0.2
2,278,259	-				-1.3
2,278,592	+		LRK55_RS10345	0.24	+1.6
2,278,592	+		LRK55_RS10345	0.24	-1.1
2,278,592	+		LRK55_RS10345	0.24	-0.5
2,278,592	+		LRK55_RS10345	0.24	-1.1
2,278,592	+		LRK55_RS10345	0.24	-0.9
2,278,592	+		LRK55_RS10345	0.24	-2.3
2,278,592	+		LRK55_RS10345	0.24	-0.1
2,278,592	+		LRK55_RS10345	0.24	-1.1
2,278,593	-		LRK55_RS10345	0.24	-1.0
2,278,593	-		LRK55_RS10345	0.24	+0.3
2,278,593	-		LRK55_RS10345	0.24	-0.4
2,278,593	-		LRK55_RS10345	0.24	+0.7
2,278,706	+		LRK55_RS10345	0.36	+0.8
2,278,706	+		LRK55_RS10345	0.36	-1.1
2,278,706	+		LRK55_RS10345	0.36	-1.3
2,278,706	+		LRK55_RS10345	0.36	-0.9
2,278,706	+		LRK55_RS10345	0.36	+0.2
2,278,706	+		LRK55_RS10345	0.36	-0.7
2,278,707	-		LRK55_RS10345	0.36	-2.0
2,278,707	-		LRK55_RS10345	0.36	-1.4
2,278,707	-		LRK55_RS10345	0.36	-0.9
2,278,707	-		LRK55_RS10345	0.36	+0.7
2,278,865	+		LRK55_RS10345	0.53	-0.1
2,278,866	-		LRK55_RS10345	0.53	-0.7
2,278,973	+		LRK55_RS10345	0.64	-1.5
2,278,973	+		LRK55_RS10345	0.64	-2.4
2,278,973	+		LRK55_RS10345	0.64	-3.2
2,278,973	+		LRK55_RS10345	0.64	+0.5
2,278,973	+		LRK55_RS10345	0.64	+0.6
2,278,974	-		LRK55_RS10345	0.64	-1.3
2,278,974	-		LRK55_RS10345	0.64	-0.8
2,278,974	-		LRK55_RS10345	0.64	+0.3
2,278,974	-		LRK55_RS10345	0.64	-1.5
2,278,974	-		LRK55_RS10345	0.64	+0.7
2,279,071	+		LRK55_RS10345	0.75	+0.5
2,279,072	-		LRK55_RS10345	0.75	-0.5
2,279,072	-		LRK55_RS10345	0.75	-0.3
2,279,132	+		LRK55_RS10345	0.81	-1.8
2,279,132	+		LRK55_RS10345	0.81	-0.8
2,279,132	+		LRK55_RS10345	0.81	-0.7
2,279,133	-		LRK55_RS10345	0.81	+0.0
2,279,133	-		LRK55_RS10345	0.81	+0.8
2,279,133	-		LRK55_RS10345	0.81	+0.5
2,279,133	-		LRK55_RS10345	0.81	-0.1
2,279,133	-		LRK55_RS10345	0.81	-0.3
2,279,133	-		LRK55_RS10345	0.81	-0.9
2,279,136	-		LRK55_RS10345	0.81	-2.3
2,279,136	-		LRK55_RS10345	0.81	-0.2