Strain Fitness in Rhodanobacter denitrificans MT42 around LRK55_RS18850

Experiment: R2A with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Metal_ion_mix_sitestressplate 2 x
110,160	+		LRK55_RS18845	0.63	-1.3
110,160	+		LRK55_RS18845	0.63	-0.2
110,160	+		LRK55_RS18845	0.63	+0.6
110,160	+		LRK55_RS18845	0.63	+0.9
110,160	+		LRK55_RS18845	0.63	-0.4
110,160	+		LRK55_RS18845	0.63	+0.1
110,161	-		LRK55_RS18845	0.63	-0.5
110,161	-		LRK55_RS18845	0.63	+0.7
110,314	+		LRK55_RS18845	0.70	+0.6
110,314	+		LRK55_RS18845	0.70	-0.9
110,315	-		LRK55_RS18845	0.71	-1.8
110,484	+		LRK55_RS18845	0.79	+1.6
110,484	+		LRK55_RS18845	0.79	-0.1
110,484	+		LRK55_RS18845	0.79	+0.3
110,484	+		LRK55_RS18845	0.79	-0.2
110,485	-		LRK55_RS18845	0.79	-0.9
110,485	-		LRK55_RS18845	0.79	-0.8
110,485	-		LRK55_RS18845	0.79	-0.2
110,498	-		LRK55_RS18845	0.79	+0.8
110,569	+		LRK55_RS18845	0.83	-0.2
110,749	+				-0.7
110,750	-				-0.3
110,776	+				-0.8
110,776	+				+1.3
110,776	+				-0.9
110,777	-				+1.3
110,777	-				+0.3
110,777	-				+1.1
110,777	-				+1.1
110,777	-				-0.4
110,777	-				+0.0
110,791	-				-1.1
110,791	-				+0.7
110,851	+				-0.0
110,851	+				+0.9
110,851	+				-0.4
110,851	+				+0.1
110,851	+				-0.3
110,851	+				-2.3
110,851	+				-0.7
110,851	+				+0.1
110,852	-				-0.3
110,852	-				+0.2
110,852	-				-0.4
110,852	-				+0.1
110,888	-				+0.9
110,936	+				-0.8
110,936	+				-0.3
110,937	-				+0.1
111,081	-		LRK55_RS18850	0.15	+0.1
111,212	+		LRK55_RS18850	0.44	-2.2
111,212	+		LRK55_RS18850	0.44	-0.5
111,212	+		LRK55_RS18850	0.44	-0.8
111,212	+		LRK55_RS18850	0.44	-1.3
111,213	-		LRK55_RS18850	0.44	-0.5
111,213	-		LRK55_RS18850	0.44	-0.2
111,213	-		LRK55_RS18850	0.44	-0.1
111,213	-		LRK55_RS18850	0.44	-0.0
111,213	-		LRK55_RS18850	0.44	+0.2
111,315	-		LRK55_RS18850	0.67	+2.6
111,332	+		LRK55_RS18850	0.70	-0.2
111,333	-		LRK55_RS18850	0.71	+1.2
111,333	-		LRK55_RS18850	0.71	+1.4
111,333	-		LRK55_RS18850	0.71	-0.9
111,333	-		LRK55_RS18850	0.71	-0.0
111,333	-		LRK55_RS18850	0.71	+0.7
111,374	+		LRK55_RS18850	0.80	-0.4
111,374	+		LRK55_RS18850	0.80	+0.1
111,374	+		LRK55_RS18850	0.80	+0.1
111,375	-		LRK55_RS18850	0.80	+0.6
111,375	-		LRK55_RS18850	0.80	-0.0
111,375	-		LRK55_RS18850	0.80	-1.2
111,375	-		LRK55_RS18850	0.80	-0.4
111,375	-		LRK55_RS18850	0.80	-0.2
111,671	+		LRK55_RS18855	0.18	-0.1
111,712	+		LRK55_RS18855	0.22	-0.7
111,713	-		LRK55_RS18855	0.22	-0.2
111,777	+		LRK55_RS18855	0.28	+0.5
112,046	+		LRK55_RS18855	0.52	-1.1
112,046	+		LRK55_RS18855	0.52	-0.0
112,046	+		LRK55_RS18855	0.52	+0.5
112,046	+		LRK55_RS18855	0.52	+0.4
112,046	+		LRK55_RS18855	0.52	-1.5
112,047	-		LRK55_RS18855	0.52	-0.1
112,091	-		LRK55_RS18855	0.56	-1.1
112,146	-		LRK55_RS18855	0.61	+1.6
112,146	-		LRK55_RS18855	0.61	-2.5
112,245	+		LRK55_RS18855	0.70	+0.9
112,246	-		LRK55_RS18855	0.70	-1.0
112,246	-		LRK55_RS18855	0.70	+0.1