Strain Fitness in Rhodanobacter denitrificans MT42 around LRK55_RS16625

Experiment: R2A with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Metal_ion_mix_sitestressplate 2 x
3,607,802	+				-0.7
3,607,802	+				+1.3
3,607,802	+				-0.7
3,607,802	+				+0.1
3,607,808	+				-2.2
3,607,808	+				-0.7
3,607,808	+				-1.5
3,607,808	+				+0.3
3,607,808	+				+0.0
3,607,808	+				+0.9
3,607,808	+				+1.0
3,607,808	+				+0.3
3,607,808	+				-0.1
3,607,808	+				+0.1
3,607,808	+				-0.3
3,607,808	+				+0.0
3,607,808	+				-2.1
3,607,808	+				-2.1
3,607,808	+				-0.8
3,607,808	+				-1.2
3,607,808	+				-0.8
3,607,808	+				-2.1
3,607,808	+				-0.2
3,607,808	+				-1.8
3,607,808	+				+0.0
3,607,808	+				-2.1
3,607,808	+				+0.0
3,607,808	+				-1.0
3,607,808	+				-3.5
3,607,808	+				-1.8
3,607,808	+				-0.2
3,607,808	+				+0.3
3,607,808	+				-1.7
3,607,808	+				+1.0
3,607,808	+				-0.2
3,607,808	+				-0.6
3,607,808	+				-0.6
3,607,808	+				-0.4
3,607,808	+				-1.1
3,608,573	+				-1.5
3,608,573	+				-0.4
3,608,573	+				-1.2
3,608,573	+				+0.9
3,608,573	+				-2.1
3,608,573	+				-0.9
3,608,573	+				+0.2
3,608,573	+				+0.1
3,608,573	+				-1.8
3,608,573	+				+0.3
3,608,573	+				-1.7
3,608,573	+				-1.8
3,608,573	+				+0.4
3,608,573	+				-1.4
3,608,573	+				+2.8
3,608,573	+				+1.3
3,608,574	-				+0.1
3,608,574	-				-0.4
3,608,574	-				-0.0
3,608,574	-				-1.5
3,608,574	-				-2.7
3,608,574	-				-0.1
3,608,574	-				-1.6
3,608,574	-				-1.1
3,608,574	-				-0.5
3,608,574	-				-0.2
3,608,574	-				-0.5
3,608,574	-				-1.1
3,608,691	+				-0.0
3,608,692	-				+1.0
3,608,696	+				+0.3
3,608,696	+				-1.1
3,608,696	+				+0.5
3,608,696	+				+0.3
3,608,696	+				+1.2
3,608,696	+				+0.6
3,610,066	+				-0.2
3,610,066	+				+0.4
3,610,066	+				+0.6
3,610,066	+				+0.3
3,610,066	+				+0.9
3,610,067	-				-2.9
3,610,067	-				-0.2
3,610,067	-				-1.2
3,610,292	+				+0.3
3,610,292	+				-1.1
3,610,292	+				+0.7
3,610,293	-				+1.6
3,610,293	-				-2.0
3,610,293	-				+0.2
3,610,293	-				+0.3
3,610,293	-				-1.7
3,610,533	+		LRK55_RS16635	0.34	+0.6
3,610,533	+		LRK55_RS16635	0.34	+1.3
3,610,533	+		LRK55_RS16635	0.34	+1.5
3,610,534	-		LRK55_RS16635	0.34	+0.2
3,610,534	-		LRK55_RS16635	0.34	+0.6
3,610,534	-		LRK55_RS16635	0.34	+1.3
3,610,534	-		LRK55_RS16635	0.34	+0.2
3,610,695	+		LRK55_RS16635	0.62	-0.8
3,610,788	+		LRK55_RS16635	0.78	+0.8
3,610,788	+		LRK55_RS16635	0.78	-1.0
3,610,788	+		LRK55_RS16635	0.78	-0.2
3,610,789	-		LRK55_RS16635	0.78	+0.3
3,610,822	+		LRK55_RS16635	0.84	+0.4
3,610,822	+		LRK55_RS16635	0.84	+0.2
3,610,822	+		LRK55_RS16635	0.84	-0.4
3,610,822	+		LRK55_RS16635	0.84	+0.3
3,610,822	+		LRK55_RS16635	0.84	+0.9
3,610,823	-		LRK55_RS16635	0.84	-1.1
3,610,823	-		LRK55_RS16635	0.84	+1.2
3,610,823	-		LRK55_RS16635	0.84	+0.9
3,610,823	-		LRK55_RS16635	0.84	-1.4
3,610,823	-		LRK55_RS16635	0.84	-0.8