Strain Fitness in Rhodanobacter denitrificans MT42 around LRK55_RS05290

Experiment: R2A with Metal_ion_mix_sitestressplate 2 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Metal_ion_mix_sitestressplate 2 x
1,145,863	-		LRK55_RS05285	0.51	-1.1
1,146,146	-		LRK55_RS05285	0.66	-0.5
1,146,348	+		LRK55_RS05285	0.77	-1.3
1,146,348	+		LRK55_RS05285	0.77	+0.5
1,146,349	-		LRK55_RS05285	0.77	-2.0
1,146,349	-		LRK55_RS05285	0.77	-1.5
1,146,351	-		LRK55_RS05285	0.77	-1.1
1,146,351	-		LRK55_RS05285	0.77	-1.3
1,146,351	-		LRK55_RS05285	0.77	-1.5
1,146,351	-		LRK55_RS05285	0.77	-0.5
1,146,351	-		LRK55_RS05285	0.77	-0.1
1,146,352	+		LRK55_RS05285	0.77	-0.5
1,146,353	-		LRK55_RS05285	0.77	-1.7
1,146,353	-		LRK55_RS05285	0.77	-1.3
1,146,353	-		LRK55_RS05285	0.77	-1.1
1,146,451	+		LRK55_RS05285	0.82	-1.5
1,146,452	-		LRK55_RS05285	0.82	-1.3
1,146,452	-		LRK55_RS05285	0.82	-1.1
1,146,514	+		LRK55_RS05285	0.86	-1.7
1,146,667	+				-0.9
1,146,667	+				-0.5
1,147,182	+		LRK55_RS05290	0.43	-0.5
1,147,183	-		LRK55_RS05290	0.43	-0.5
1,147,183	-		LRK55_RS05290	0.43	-0.9
1,147,183	-		LRK55_RS05290	0.43	+1.5
1,147,685	+				-0.3
1,147,685	+				-1.5
1,147,686	-				-0.4
1,147,763	+				-0.9
1,147,764	-				+0.1
1,147,764	-				+0.2
1,147,764	-				+0.1
1,147,790	+				+0.3
1,147,791	-				-0.2
1,147,824	+				+0.3
1,147,824	+				-1.8
1,147,824	+				-0.3
1,147,824	+				-1.0
1,147,824	+				-0.7
1,147,824	+				+1.3
1,147,825	-				-0.8
1,147,848	+				+0.3
1,147,849	-				+0.7
1,147,875	+				-0.4
1,147,875	+				-1.3
1,148,184	+		LRK55_RS05295	0.23	-0.9
1,148,184	+		LRK55_RS05295	0.23	-1.0
1,148,212	-		LRK55_RS05295	0.25	-0.5
1,148,549	+		LRK55_RS05295	0.49	+0.5
1,148,550	-		LRK55_RS05295	0.49	+0.8
1,148,550	-		LRK55_RS05295	0.49	-0.6
1,148,550	-		LRK55_RS05295	0.49	+0.0
1,148,550	-		LRK55_RS05295	0.49	-0.2
1,148,670	+		LRK55_RS05295	0.58	+1.5
1,148,671	-		LRK55_RS05295	0.58	+0.5
1,148,671	-		LRK55_RS05295	0.58	-0.8
1,148,671	-		LRK55_RS05295	0.58	+1.1
1,148,671	-		LRK55_RS05295	0.58	+0.4
1,148,671	-		LRK55_RS05295	0.58	+0.3
1,148,682	+		LRK55_RS05295	0.59	-1.0
1,148,682	+		LRK55_RS05295	0.59	+1.0
1,148,682	+		LRK55_RS05295	0.59	-0.4
1,148,682	+		LRK55_RS05295	0.59	-0.2
1,148,682	+		LRK55_RS05295	0.59	+0.0
1,148,683	-		LRK55_RS05295	0.59	+0.3
1,148,683	-		LRK55_RS05295	0.59	+0.6
1,148,683	-		LRK55_RS05295	0.59	-0.1
1,148,683	-		LRK55_RS05295	0.59	+0.2
1,148,683	-		LRK55_RS05295	0.59	+0.3