Experiment: Anaerobic; Uranyl acetate 80 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABCV34_RS13340 and ABCV34_RS13345 are separated by 7 nucleotides ABCV34_RS13345 and ABCV34_RS13350 are separated by 7 nucleotides ABCV34_RS13350 and ABCV34_RS13355 are separated by 10 nucleotides
ABCV34_RS13340: ABCV34_RS13340 - D-alanyl-D-alanine carboxypeptidase family protein, at 2,827,687 to 2,828,943
_RS13340
ABCV34_RS13345: ABCV34_RS13345 - DUF493 family protein, at 2,828,951 to 2,829,226
_RS13345
ABCV34_RS13350: ABCV34_RS13350 - lipoyl(octanoyl) transferase LipB, at 2,829,234 to 2,829,884
_RS13350
ABCV34_RS13355: ABCV34_RS13355 - enoyl-CoA hydratase, at 2,829,895 to 2,830,686
_RS13355
Position (kb)
2828
2829
2830 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2828.008 kb on + strand, within ABCV34_RS13340 at 2828.008 kb on + strand, within ABCV34_RS13340 at 2828.008 kb on + strand, within ABCV34_RS13340 at 2828.008 kb on + strand, within ABCV34_RS13340 at 2828.008 kb on + strand, within ABCV34_RS13340 at 2828.008 kb on + strand, within ABCV34_RS13340 at 2828.009 kb on - strand, within ABCV34_RS13340 at 2828.009 kb on - strand, within ABCV34_RS13340 at 2828.009 kb on - strand, within ABCV34_RS13340 at 2828.009 kb on - strand, within ABCV34_RS13340 at 2828.009 kb on - strand, within ABCV34_RS13340 at 2828.009 kb on - strand, within ABCV34_RS13340 at 2828.009 kb on - strand, within ABCV34_RS13340 at 2828.119 kb on - strand, within ABCV34_RS13340 at 2828.259 kb on + strand, within ABCV34_RS13340 at 2828.259 kb on + strand, within ABCV34_RS13340 at 2828.268 kb on + strand, within ABCV34_RS13340 at 2828.268 kb on + strand, within ABCV34_RS13340 at 2828.269 kb on - strand, within ABCV34_RS13340 at 2828.380 kb on + strand, within ABCV34_RS13340 at 2828.380 kb on + strand, within ABCV34_RS13340 at 2828.380 kb on + strand, within ABCV34_RS13340 at 2828.380 kb on + strand, within ABCV34_RS13340 at 2828.380 kb on + strand, within ABCV34_RS13340 at 2828.381 kb on - strand, within ABCV34_RS13340 at 2828.381 kb on - strand, within ABCV34_RS13340 at 2828.381 kb on - strand, within ABCV34_RS13340 at 2828.381 kb on - strand, within ABCV34_RS13340 at 2828.404 kb on + strand, within ABCV34_RS13340 at 2828.404 kb on + strand, within ABCV34_RS13340 at 2828.405 kb on - strand, within ABCV34_RS13340 at 2828.405 kb on - strand, within ABCV34_RS13340 at 2828.497 kb on + strand, within ABCV34_RS13340 at 2828.773 kb on + strand, within ABCV34_RS13340 at 2828.774 kb on - strand, within ABCV34_RS13340 at 2828.776 kb on - strand, within ABCV34_RS13340 at 2828.776 kb on - strand, within ABCV34_RS13340 at 2829.125 kb on + strand, within ABCV34_RS13345 at 2829.125 kb on + strand, within ABCV34_RS13345 at 2829.125 kb on + strand, within ABCV34_RS13345 at 2829.125 kb on + strand, within ABCV34_RS13345 at 2829.125 kb on + strand, within ABCV34_RS13345 at 2829.125 kb on + strand, within ABCV34_RS13345 at 2829.125 kb on + strand, within ABCV34_RS13345 at 2829.125 kb on + strand, within ABCV34_RS13345 at 2829.125 kb on + strand, within ABCV34_RS13345 at 2829.125 kb on + strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.126 kb on - strand, within ABCV34_RS13345 at 2829.182 kb on + strand, within ABCV34_RS13345 at 2829.182 kb on + strand, within ABCV34_RS13345 at 2829.183 kb on - strand, within ABCV34_RS13345 at 2829.224 kb on + strand at 2829.224 kb on + strand at 2829.996 kb on + strand, within ABCV34_RS13355 at 2829.996 kb on + strand, within ABCV34_RS13355 at 2829.996 kb on + strand, within ABCV34_RS13355 at 2829.996 kb on + strand, within ABCV34_RS13355 at 2829.996 kb on + strand, within ABCV34_RS13355 at 2829.996 kb on + strand, within ABCV34_RS13355 at 2829.997 kb on - strand, within ABCV34_RS13355 at 2829.997 kb on - strand, within ABCV34_RS13355 at 2829.997 kb on - strand, within ABCV34_RS13355 at 2830.138 kb on + strand, within ABCV34_RS13355 at 2830.138 kb on + strand, within ABCV34_RS13355 at 2830.139 kb on - strand, within ABCV34_RS13355 at 2830.139 kb on - strand, within ABCV34_RS13355 at 2830.141 kb on + strand, within ABCV34_RS13355 at 2830.142 kb on - strand, within ABCV34_RS13355
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic; Uranyl acetate 80 uM remove 2,828,008 + ABCV34_RS13340 0.26 -3.0 2,828,008 + ABCV34_RS13340 0.26 -2.6 2,828,008 + ABCV34_RS13340 0.26 -3.3 2,828,008 + ABCV34_RS13340 0.26 -3.2 2,828,008 + ABCV34_RS13340 0.26 -1.8 2,828,008 + ABCV34_RS13340 0.26 -2.1 2,828,009 - ABCV34_RS13340 0.26 -0.6 2,828,009 - ABCV34_RS13340 0.26 -2.8 2,828,009 - ABCV34_RS13340 0.26 -1.3 2,828,009 - ABCV34_RS13340 0.26 -3.5 2,828,009 - ABCV34_RS13340 0.26 -3.8 2,828,009 - ABCV34_RS13340 0.26 -3.2 2,828,009 - ABCV34_RS13340 0.26 -2.2 2,828,119 - ABCV34_RS13340 0.34 -1.7 2,828,259 + ABCV34_RS13340 0.46 -1.2 2,828,259 + ABCV34_RS13340 0.46 -2.0 2,828,268 + ABCV34_RS13340 0.46 -1.8 2,828,268 + ABCV34_RS13340 0.46 -1.9 2,828,269 - ABCV34_RS13340 0.46 -1.8 2,828,380 + ABCV34_RS13340 0.55 -1.5 2,828,380 + ABCV34_RS13340 0.55 -1.4 2,828,380 + ABCV34_RS13340 0.55 -2.1 2,828,380 + ABCV34_RS13340 0.55 -2.1 2,828,380 + ABCV34_RS13340 0.55 -2.5 2,828,381 - ABCV34_RS13340 0.55 -1.2 2,828,381 - ABCV34_RS13340 0.55 -1.2 2,828,381 - ABCV34_RS13340 0.55 -1.8 2,828,381 - ABCV34_RS13340 0.55 -2.5 2,828,404 + ABCV34_RS13340 0.57 -1.8 2,828,404 + ABCV34_RS13340 0.57 -1.8 2,828,405 - ABCV34_RS13340 0.57 -1.8 2,828,405 - ABCV34_RS13340 0.57 -1.4 2,828,497 + ABCV34_RS13340 0.64 -2.8 2,828,773 + ABCV34_RS13340 0.86 -2.4 2,828,774 - ABCV34_RS13340 0.86 -2.3 2,828,776 - ABCV34_RS13340 0.87 -1.5 2,828,776 - ABCV34_RS13340 0.87 -2.5 2,829,125 + ABCV34_RS13345 0.63 -0.8 2,829,125 + ABCV34_RS13345 0.63 -2.1 2,829,125 + ABCV34_RS13345 0.63 -1.7 2,829,125 + ABCV34_RS13345 0.63 -1.6 2,829,125 + ABCV34_RS13345 0.63 -1.2 2,829,125 + ABCV34_RS13345 0.63 -2.6 2,829,125 + ABCV34_RS13345 0.63 -2.7 2,829,125 + ABCV34_RS13345 0.63 -1.4 2,829,125 + ABCV34_RS13345 0.63 -3.2 2,829,125 + ABCV34_RS13345 0.63 -1.5 2,829,126 - ABCV34_RS13345 0.63 -1.2 2,829,126 - ABCV34_RS13345 0.63 -1.2 2,829,126 - ABCV34_RS13345 0.63 -0.6 2,829,126 - ABCV34_RS13345 0.63 -1.5 2,829,126 - ABCV34_RS13345 0.63 +0.1 2,829,126 - ABCV34_RS13345 0.63 -2.5 2,829,126 - ABCV34_RS13345 0.63 -0.2 2,829,126 - ABCV34_RS13345 0.63 -2.2 2,829,126 - ABCV34_RS13345 0.63 -1.0 2,829,126 - ABCV34_RS13345 0.63 -1.7 2,829,126 - ABCV34_RS13345 0.63 -2.2 2,829,126 - ABCV34_RS13345 0.63 -2.7 2,829,126 - ABCV34_RS13345 0.63 -0.5 2,829,126 - ABCV34_RS13345 0.63 -1.5 2,829,126 - ABCV34_RS13345 0.63 -2.0 2,829,182 + ABCV34_RS13345 0.84 -0.5 2,829,182 + ABCV34_RS13345 0.84 -1.0 2,829,183 - ABCV34_RS13345 0.84 -1.2 2,829,224 + -1.7 2,829,224 + -1.2 2,829,996 + ABCV34_RS13355 0.13 -1.1 2,829,996 + ABCV34_RS13355 0.13 -0.9 2,829,996 + ABCV34_RS13355 0.13 -1.2 2,829,996 + ABCV34_RS13355 0.13 -1.1 2,829,996 + ABCV34_RS13355 0.13 -1.7 2,829,996 + ABCV34_RS13355 0.13 -1.0 2,829,997 - ABCV34_RS13355 0.13 -2.6 2,829,997 - ABCV34_RS13355 0.13 -1.5 2,829,997 - ABCV34_RS13355 0.13 -2.7 2,830,138 + ABCV34_RS13355 0.31 -1.2 2,830,138 + ABCV34_RS13355 0.31 -1.3 2,830,139 - ABCV34_RS13355 0.31 -1.2 2,830,139 - ABCV34_RS13355 0.31 -1.6 2,830,141 + ABCV34_RS13355 0.31 -1.3 2,830,142 - ABCV34_RS13355 0.31 -1.6
Or see this region's nucleotide sequence