Experiment: Anaerobic; Uranyl acetate 80 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABCV34_RS11360 and ABCV34_RS11365 are separated by 11 nucleotides ABCV34_RS11365 and ABCV34_RS11370 are separated by 9 nucleotides ABCV34_RS11370 and ABCV34_RS11375 are separated by 13 nucleotides ABCV34_RS11375 and ABCV34_RS11380 are separated by 10 nucleotides ABCV34_RS11380 and ABCV34_RS11385 are separated by 277 nucleotides
ABCV34_RS11360: ABCV34_RS11360 - 30S ribosomal protein S8, at 2,409,231 to 2,409,626
_RS11360
ABCV34_RS11365: ABCV34_RS11365 - 30S ribosomal protein S14, at 2,409,638 to 2,409,943
_RS11365
ABCV34_RS11370: ABCV34_RS11370 - 50S ribosomal protein L5, at 2,409,953 to 2,410,492
_RS11370
ABCV34_RS11375: ABCV34_RS11375 - 50S ribosomal protein L24, at 2,410,506 to 2,410,826
_RS11375
ABCV34_RS11380: ABCV34_RS11380 - 50S ribosomal protein L14, at 2,410,837 to 2,411,205
_RS11380
ABCV34_RS11385: ABCV34_RS11385 - LapD/MoxY N-terminal periplasmic domain-containing protein, at 2,411,483 to 2,413,381
_RS11385
Position (kb)
2410
2411 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2411.509 kb on - strand at 2411.556 kb on + strand at 2411.556 kb on + strand at 2411.556 kb on + strand at 2411.665 kb on - strand at 2411.799 kb on + strand, within ABCV34_RS11385 at 2411.800 kb on - strand, within ABCV34_RS11385
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic; Uranyl acetate 80 uM remove 2,411,509 - -1.2 2,411,556 + -3.0 2,411,556 + +0.0 2,411,556 + -1.5 2,411,665 - -1.8 2,411,799 + ABCV34_RS11385 0.17 -1.7 2,411,800 - ABCV34_RS11385 0.17 -1.6
Or see this region's nucleotide sequence