Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4192

Experiment: Spectinomycin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 2 mg/ml
4,341,839	+		Ga0059261_4191	0.38	+1.0
4,341,839	+		Ga0059261_4191	0.38	+0.7
4,341,839	+		Ga0059261_4191	0.38	-1.2
4,341,865	+		Ga0059261_4191	0.40	+0.8
4,341,865	+		Ga0059261_4191	0.40	+0.2
4,341,865	+		Ga0059261_4191	0.40	-0.6
4,341,865	+		Ga0059261_4191	0.40	+0.4
4,341,865	+		Ga0059261_4191	0.40	+0.5
4,341,866	-		Ga0059261_4191	0.40	+0.6
4,341,866	-		Ga0059261_4191	0.40	+0.1
4,341,866	-		Ga0059261_4191	0.40	+0.3
4,342,043	-		Ga0059261_4191	0.51	+0.2
4,342,199	+		Ga0059261_4191	0.62	+0.1
4,342,199	+		Ga0059261_4191	0.62	+0.4
4,342,355	+		Ga0059261_4191	0.72	-0.8
4,342,355	+				-0.1
4,342,356	-		Ga0059261_4191	0.72	+1.0
4,342,356	-		Ga0059261_4191	0.72	+1.2
4,342,356	-		Ga0059261_4191	0.72	+0.4
4,342,376	+		Ga0059261_4191	0.73	+0.3
4,342,656	+				+0.1
4,342,656	+				+0.3
4,342,656	+				+0.4
4,342,656	+				+0.2
4,342,656	+				+1.0
4,342,657	-				+1.1
4,342,657	-				+0.6
4,342,856	-				+0.1
4,343,666	+		Ga0059261_4192	0.83	+0.9
4,343,667	-		Ga0059261_4192	0.83	-0.7
4,343,667	-		Ga0059261_4192	0.83	+0.1
4,343,667	-		Ga0059261_4192	0.83	+0.7
4,343,754	+				+1.2
4,343,754	+				-0.1
4,343,755	-				+0.4
4,343,755	-				+0.7
4,343,812	+				-0.0
4,343,812	+				+0.5
4,343,812	+				-0.8
4,343,812	+				+1.2
4,343,812	+				-0.1
4,343,812	+				+0.3
4,343,812	+				-0.5
4,343,812	+				-0.5
4,343,812	+				-0.2
4,343,812	+				-1.1
4,343,812	+				-0.1
4,343,812	+				+0.5
4,343,812	+				-0.3
4,343,812	+				-0.5
4,343,812	+				+0.4
4,343,812	+				-1.7
4,343,813	-				-0.5
4,343,813	-				-1.0
4,343,813	-				+0.4
4,343,813	-				+0.4
4,343,813	-				+0.2
4,343,813	-				-0.7
4,343,813	-				-0.0
4,343,813	-				+1.9
4,343,821	+				-0.0
4,343,821	+				+0.8
4,343,821	+				-0.3
4,343,821	+				-1.0
4,343,821	+				+0.9
4,343,821	+				+0.0
4,343,821	+				-0.1
4,343,821	+				+0.7
4,343,822	-				-0.9
4,343,822	-				-0.2
4,343,822	-				+0.3
4,343,822	-				+0.0
4,343,822	-				+0.6
4,343,822	-				+0.6
4,343,987	+				+0.1
4,343,987	+				-0.0
4,343,987	+				+0.5
4,343,987	+				-0.2
4,343,987	+				+0.4
4,343,987	+				+0.8
4,343,988	-				+0.2
4,343,988	-				-0.3
4,343,988	-				-1.1
4,343,988	-				-2.4
4,343,995	+				+0.2
4,343,996	-				-0.1
4,343,996	-				+1.2
4,344,051	+		Ga0059261_4193	0.13	-0.3
4,344,051	+		Ga0059261_4193	0.13	+0.5
4,344,051	+		Ga0059261_4193	0.13	+0.1
4,344,052	-		Ga0059261_4193	0.13	+1.8
4,344,052	-		Ga0059261_4193	0.13	+0.6
4,344,057	+		Ga0059261_4193	0.14	+0.0
4,344,057	+		Ga0059261_4193	0.14	+0.4
4,344,057	+		Ga0059261_4193	0.14	+0.4
4,344,058	-		Ga0059261_4193	0.14	+0.5
4,344,058	-		Ga0059261_4193	0.14	+1.1
4,344,076	-		Ga0059261_4193	0.15	-0.1
4,344,076	-		Ga0059261_4193	0.15	+0.2
4,344,076	-		Ga0059261_4193	0.15	-0.4
4,344,249	+		Ga0059261_4193	0.26	+0.1
4,344,250	-		Ga0059261_4193	0.26	+0.2
4,344,250	-		Ga0059261_4193	0.26	+0.2
4,344,250	-		Ga0059261_4193	0.26	-0.3
4,344,325	-		Ga0059261_4193	0.30	+0.1
4,344,347	+		Ga0059261_4193	0.32	+0.0
4,344,348	-		Ga0059261_4193	0.32	-1.0
4,344,387	+		Ga0059261_4193	0.34	+1.8
4,344,387	+		Ga0059261_4193	0.34	+0.0
4,344,387	+		Ga0059261_4193	0.34	+0.9
4,344,387	+		Ga0059261_4193	0.34	-0.2
4,344,388	-		Ga0059261_4193	0.34	+1.6
4,344,388	-		Ga0059261_4193	0.34	+0.4
4,344,388	-		Ga0059261_4193	0.34	-0.8
4,344,513	+		Ga0059261_4193	0.42	-0.1
4,344,514	-		Ga0059261_4193	0.42	+0.9
4,344,514	-		Ga0059261_4193	0.42	+0.2
4,344,514	-		Ga0059261_4193	0.42	+1.0
4,344,514	-		Ga0059261_4193	0.42	+0.8
4,344,514	-		Ga0059261_4193	0.42	+0.8
4,344,514	-		Ga0059261_4193	0.42	-0.2
4,344,514	-		Ga0059261_4193	0.42	+0.5
4,344,514	-		Ga0059261_4193	0.42	+0.4
4,344,702	+		Ga0059261_4193	0.54	+0.3
4,344,702	+		Ga0059261_4193	0.54	+0.7
4,344,702	+		Ga0059261_4193	0.54	+0.4
4,344,703	-		Ga0059261_4193	0.54	+2.6
4,344,703	-		Ga0059261_4193	0.54	+0.6
4,344,741	+		Ga0059261_4193	0.57	+0.7
4,344,741	+		Ga0059261_4193	0.57	+0.2
4,344,741	+		Ga0059261_4193	0.57	+0.7
4,344,741	+		Ga0059261_4193	0.57	+0.6
4,344,741	+		Ga0059261_4193	0.57	+0.3
4,344,741	+		Ga0059261_4193	0.57	+0.9
4,344,741	+		Ga0059261_4193	0.57	+0.5
4,344,741	+		Ga0059261_4193	0.57	+1.2
4,344,741	+		Ga0059261_4193	0.57	+0.5
4,344,741	+		Ga0059261_4193	0.57	+0.5
4,344,742	-		Ga0059261_4193	0.57	+1.7
4,344,742	-		Ga0059261_4193	0.57	-0.1
4,344,742	-		Ga0059261_4193	0.57	+1.6
4,344,742	-		Ga0059261_4193	0.57	+2.0
4,344,742	-		Ga0059261_4193	0.57	+0.5
4,344,742	-		Ga0059261_4193	0.57	-0.1
4,344,742	-		Ga0059261_4193	0.57	-0.0
4,344,742	-		Ga0059261_4193	0.57	+0.0
4,344,742	-		Ga0059261_4193	0.57	+0.7
4,344,742	-		Ga0059261_4193	0.57	+0.3
4,344,742	-		Ga0059261_4193	0.57	-0.7
4,344,742	-		Ga0059261_4193	0.57	-0.3
4,344,789	+		Ga0059261_4193	0.60	+0.9
4,344,790	-		Ga0059261_4193	0.60	+0.0
4,344,804	+		Ga0059261_4193	0.61	+1.4
4,344,804	+		Ga0059261_4193	0.61	+0.5
4,344,804	+		Ga0059261_4193	0.61	-0.0
4,344,804	+				+0.9
4,344,804	+		Ga0059261_4193	0.61	+0.2
4,344,804	+		Ga0059261_4193	0.61	+0.1
4,344,804	+		Ga0059261_4193	0.61	+0.0
4,344,804	+		Ga0059261_4193	0.61	+0.8
4,344,804	+		Ga0059261_4193	0.61	-0.1
4,344,804	+		Ga0059261_4193	0.61	-0.8
4,344,804	+		Ga0059261_4193	0.61	+0.1
4,344,804	+		Ga0059261_4193	0.61	-0.0
4,344,805	-		Ga0059261_4193	0.61	+0.6
4,344,805	-		Ga0059261_4193	0.61	-0.3
4,344,805	-		Ga0059261_4193	0.61	-0.6
4,344,805	-		Ga0059261_4193	0.61	-0.2
4,344,805	-		Ga0059261_4193	0.61	+0.5
4,344,805	-		Ga0059261_4193	0.61	+1.1
4,344,805	-		Ga0059261_4193	0.61	+1.3
4,344,805	-		Ga0059261_4193	0.61	-0.4
4,344,806	+		Ga0059261_4193	0.61	+0.7
4,344,807	-		Ga0059261_4193	0.61	+0.8