Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_4169

Experiment: Spectinomycin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 2 mg/ml
4,318,307	+		Ga0059261_4167	0.53	+2.8
4,318,307	+		Ga0059261_4167	0.53	+0.9
4,318,307	+		Ga0059261_4167	0.53	+0.6
4,318,307	+		Ga0059261_4167	0.53	-0.2
4,318,307	+		Ga0059261_4167	0.53	-0.4
4,318,308	-		Ga0059261_4167	0.53	+0.4
4,318,308	-		Ga0059261_4167	0.53	-0.0
4,318,308	-		Ga0059261_4167	0.53	+0.3
4,318,308	-		Ga0059261_4167	0.53	+0.7
4,318,308	-		Ga0059261_4167	0.53	+0.7
4,318,308	-		Ga0059261_4167	0.53	+0.1
4,318,347	+		Ga0059261_4167	0.60	-0.4
4,318,372	+		Ga0059261_4167	0.65	-0.3
4,318,372	+		Ga0059261_4167	0.65	+0.6
4,318,374	+		Ga0059261_4167	0.65	-0.0
4,318,374	+		Ga0059261_4167	0.65	+0.0
4,318,374	+		Ga0059261_4167	0.65	-1.6
4,318,374	+		Ga0059261_4167	0.65	-0.6
4,318,374	+		Ga0059261_4167	0.65	+1.1
4,318,374	+		Ga0059261_4167	0.65	+1.7
4,318,375	-		Ga0059261_4167	0.65	+0.3
4,318,375	-		Ga0059261_4167	0.65	+0.1
4,318,453	+		Ga0059261_4167	0.79	+0.0
4,318,609	+				+0.3
4,318,609	+				+1.0
4,318,609	+				+0.1
4,318,609	+				+1.1
4,318,609	+				+0.2
4,318,610	-				-0.6
4,318,610	-				+0.3
4,318,610	-				+0.2
4,318,922	-		Ga0059261_4168	0.75	+0.9
4,319,065	+				-2.4
4,319,065	+				+0.6
4,319,065	+				-0.2
4,319,065	+				+0.2
4,319,065	+				+0.9
4,319,065	+				-0.1
4,319,066	-				-0.6
4,319,066	-				+0.3
4,319,066	-				-1.0
4,319,066	-				-0.0
4,319,066	-				+0.0
4,319,239	+				+0.0
4,319,239	+				+0.8
4,319,239	+				+0.4
4,319,239	+				-0.7
4,319,240	-				-1.0
4,319,240	-				-0.1
4,319,314	+				+1.2
4,319,314	+				-0.9
4,319,315	-				-0.1
4,319,315	-				-0.8
4,319,315	-				+0.4
4,319,315	-				-0.1
4,319,315	-				+0.4
4,319,315	-				-0.3
4,319,315	-				-0.6
4,319,326	-				-0.3
4,319,342	+				-0.5
4,319,343	-				+0.6
4,319,343	-				+0.3
4,320,200	+		Ga0059261_4169	0.59	+0.2
4,320,200	+		Ga0059261_4169	0.59	+0.0
4,320,201	-		Ga0059261_4169	0.59	+0.2
4,320,201	-		Ga0059261_4169	0.59	+0.6
4,320,201	-		Ga0059261_4169	0.59	+0.2
4,320,201	-		Ga0059261_4169	0.59	+0.2
4,320,485	+		Ga0059261_4169	0.76	-0.3
4,320,486	-		Ga0059261_4169	0.76	+1.0
4,320,486	-		Ga0059261_4169	0.76	+1.0
4,320,486	-		Ga0059261_4169	0.76	+0.1
4,320,878	+				-0.4
4,320,878	+				-0.2
4,320,878	+				-0.4
4,320,878	+				-0.1
4,320,878	+				+0.9
4,320,879	-				+0.0
4,320,908	+				-1.4
4,320,909	-		Ga0059261_4170	0.10	-0.0
4,320,909	-		Ga0059261_4170	0.10	-0.6
4,320,909	-		Ga0059261_4170	0.10	+0.4
4,320,920	+		Ga0059261_4170	0.13	+0.4
4,320,921	-		Ga0059261_4170	0.13	-0.2
4,320,921	-		Ga0059261_4170	0.13	-0.2
4,320,921	-		Ga0059261_4170	0.13	+0.2
4,320,921	-		Ga0059261_4170	0.13	+1.0
4,320,921	-		Ga0059261_4170	0.13	+1.3
4,320,941	+		Ga0059261_4170	0.19	+0.1
4,320,941	+		Ga0059261_4170	0.19	+2.0
4,320,941	+		Ga0059261_4170	0.19	-1.1
4,320,941	+		Ga0059261_4170	0.19	-0.4
4,320,941	+		Ga0059261_4170	0.19	+0.2
4,321,079	+		Ga0059261_4170	0.55	+0.4
4,321,079	+		Ga0059261_4170	0.55	+0.3
4,321,079	+		Ga0059261_4170	0.55	-0.2
4,321,080	-		Ga0059261_4170	0.56	-0.4
4,321,091	+		Ga0059261_4170	0.59	-0.6
4,321,091	+		Ga0059261_4170	0.59	+0.3
4,321,092	-		Ga0059261_4170	0.59	-1.0
4,321,092	-		Ga0059261_4170	0.59	-0.1
4,321,092	-		Ga0059261_4170	0.59	+0.3
4,321,092	-		Ga0059261_4170	0.59	-0.1
4,321,092	-		Ga0059261_4170	0.59	+0.5
4,321,191	+		Ga0059261_4170	0.85	-0.7
4,321,191	+		Ga0059261_4170	0.85	+0.0
4,321,251	+				+0.1
4,321,251	+				-0.0
4,321,251	+				-0.5
4,321,251	+				-0.6
4,321,251	+				-0.4
4,321,251	+				-0.2
4,321,252	+				+0.6
4,321,252	-				-0.1
4,321,252	-				+0.3
4,321,252	-				+0.1
4,321,252	-				-0.3
4,321,252	-				+0.3
4,321,252	-				-0.0
4,321,252	-				+0.2
4,321,298	+				+0.8
4,321,299	-				+0.0
4,321,411	+		Ga0059261_4171	0.16	+1.4
4,321,439	+		Ga0059261_4171	0.22	+0.6
4,321,439	+		Ga0059261_4171	0.22	+0.0
4,321,439	+		Ga0059261_4171	0.22	+0.4
4,321,662	+		Ga0059261_4171	0.70	+0.4
4,321,717	+		Ga0059261_4171	0.82	-0.4
4,321,718	-		Ga0059261_4171	0.82	-0.0
4,321,718	-		Ga0059261_4171	0.82	+0.1
4,321,798	+				+0.5
4,321,799	-				-0.1
4,321,799	-				+0.2
4,321,799	-				-0.7
4,321,819	+				+0.4
4,321,819	+				+0.4
4,321,819	+				-1.1
4,321,819	+				-0.3
4,321,820	-				+0.7