Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3857

Experiment: Spectinomycin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 2 mg/ml
3,959,750	+		Ga0059261_3856	0.25	+0.3
3,959,750	+		Ga0059261_3856	0.25	-0.3
3,959,751	-		Ga0059261_3856	0.26	-0.1
3,959,751	-		Ga0059261_3856	0.26	-0.1
3,959,753	-		Ga0059261_3856	0.26	-0.2
3,959,763	+		Ga0059261_3856	0.26	-0.2
3,959,763	+		Ga0059261_3856	0.26	-1.4
3,959,763	+		Ga0059261_3856	0.26	-0.5
3,959,764	-		Ga0059261_3856	0.27	+0.0
3,959,764	-		Ga0059261_3856	0.27	+0.1
3,959,798	+		Ga0059261_3856	0.29	-0.4
3,959,799	-		Ga0059261_3856	0.29	+0.0
3,959,800	+		Ga0059261_3856	0.29	+0.2
3,959,800	+		Ga0059261_3856	0.29	+0.1
3,959,800	+		Ga0059261_3856	0.29	-0.4
3,959,800	+		Ga0059261_3856	0.29	+0.0
3,959,800	+		Ga0059261_3856	0.29	-0.4
3,959,801	-		Ga0059261_3856	0.30	-0.2
3,959,801	-		Ga0059261_3856	0.30	-0.5
3,959,801	-		Ga0059261_3856	0.30	+0.1
3,959,801	-		Ga0059261_3856	0.30	+0.5
3,959,861	+		Ga0059261_3856	0.34	-0.4
3,959,861	+		Ga0059261_3856	0.34	-0.0
3,959,861	+		Ga0059261_3856	0.34	-0.1
3,959,862	-		Ga0059261_3856	0.34	+0.5
3,959,862	-		Ga0059261_3856	0.34	+0.6
3,959,862	-		Ga0059261_3856	0.34	-1.0
3,959,862	-		Ga0059261_3856	0.34	-1.3
3,959,862	-		Ga0059261_3856	0.34	-0.5
3,959,862	-		Ga0059261_3856	0.34	+0.3
3,959,863	+		Ga0059261_3856	0.35	+0.3
3,959,863	+		Ga0059261_3856	0.35	-0.1
3,959,863	+		Ga0059261_3856	0.35	-0.1
3,960,039	+		Ga0059261_3856	0.49	-0.2
3,960,040	-		Ga0059261_3856	0.49	-0.0
3,960,040	-		Ga0059261_3856	0.49	-0.5
3,960,068	+		Ga0059261_3856	0.51	+1.0
3,960,173	+		Ga0059261_3856	0.60	-0.7
3,960,173	+		Ga0059261_3856	0.60	+0.5
3,960,173	+		Ga0059261_3856	0.60	+0.1
3,960,173	+		Ga0059261_3856	0.60	+0.1
3,960,173	+		Ga0059261_3856	0.60	-0.4
3,960,173	+		Ga0059261_3856	0.60	-0.8
3,960,174	-		Ga0059261_3856	0.60	-0.5
3,960,174	-				-1.1
3,960,200	+		Ga0059261_3856	0.62	-0.1
3,960,200	+		Ga0059261_3856	0.62	+0.4
3,960,200	+		Ga0059261_3856	0.62	+0.7
3,960,200	+		Ga0059261_3856	0.62	-0.2
3,960,200	+		Ga0059261_3856	0.62	-0.2
3,960,200	+		Ga0059261_3856	0.62	-0.2
3,960,201	-		Ga0059261_3856	0.62	-0.1
3,960,203	+		Ga0059261_3856	0.62	-1.1
3,960,203	+		Ga0059261_3856	0.62	-0.4
3,960,284	+				-0.5
3,960,311	+		Ga0059261_3856	0.71	+0.6
3,960,311	+				+0.1
3,960,312	-		Ga0059261_3856	0.71	-0.2
3,960,312	-		Ga0059261_3856	0.71	+0.7
3,960,312	-		Ga0059261_3856	0.71	-0.3
3,960,312	-		Ga0059261_3856	0.71	+0.3
3,960,312	-		Ga0059261_3856	0.71	+0.3
3,960,317	+		Ga0059261_3856	0.71	-0.9
3,960,317	+		Ga0059261_3856	0.71	+0.9
3,960,317	+				+1.5
3,960,318	-		Ga0059261_3856	0.71	+0.9
3,960,318	-		Ga0059261_3856	0.71	-0.7
3,960,318	-		Ga0059261_3856	0.71	-0.3
3,960,318	-		Ga0059261_3856	0.71	-0.7
3,960,772	+				-0.7
3,960,772	+				+0.1
3,960,772	+				-0.0
3,960,772	+				-0.2
3,960,772	+				-0.9
3,960,772	+				+0.1
3,960,773	-				-1.3
3,960,773	-				-0.1
3,960,773	-				+0.0
3,960,919	+		Ga0059261_3857	0.18	+0.0
3,960,920	-		Ga0059261_3857	0.18	-0.2
3,960,920	-		Ga0059261_3857	0.18	-0.9
3,961,031	+		Ga0059261_3857	0.26	-0.1
3,961,086	+		Ga0059261_3857	0.30	-0.6
3,961,086	+		Ga0059261_3857	0.30	-0.5
3,961,086	+		Ga0059261_3857	0.30	+0.1
3,961,086	+		Ga0059261_3857	0.30	-0.1
3,961,086	+		Ga0059261_3857	0.30	-0.9
3,961,086	+		Ga0059261_3857	0.30	+0.0
3,961,086	+		Ga0059261_3857	0.30	-0.8
3,961,086	+		Ga0059261_3857	0.30	+0.3
3,961,087	-		Ga0059261_3857	0.30	-0.4
3,961,087	-		Ga0059261_3857	0.30	+2.5
3,961,087	-				-0.5
3,961,287	+		Ga0059261_3857	0.44	+0.1
3,961,287	+		Ga0059261_3857	0.44	-0.1
3,961,287	+		Ga0059261_3857	0.44	-0.3
3,961,287	+		Ga0059261_3857	0.44	-1.4
3,961,287	+		Ga0059261_3857	0.44	-0.6
3,961,287	+		Ga0059261_3857	0.44	-0.6
3,961,287	+		Ga0059261_3857	0.44	+0.6
3,961,287	+		Ga0059261_3857	0.44	+0.1
3,961,288	-		Ga0059261_3857	0.44	-0.7
3,961,288	-		Ga0059261_3857	0.44	+1.0
3,961,288	-		Ga0059261_3857	0.44	+1.0
3,961,288	-		Ga0059261_3857	0.44	-0.4
3,961,288	-		Ga0059261_3857	0.44	-0.1
3,961,288	-		Ga0059261_3857	0.44	-0.3
3,961,288	-		Ga0059261_3857	0.44	-1.0
3,961,290	+		Ga0059261_3857	0.44	-0.3
3,961,290	+		Ga0059261_3857	0.44	+0.5
3,961,290	+		Ga0059261_3857	0.44	-0.2
3,961,290	+		Ga0059261_3857	0.44	+0.8
3,961,290	+		Ga0059261_3857	0.44	+1.5
3,961,290	+		Ga0059261_3857	0.44	-0.7
3,961,290	+		Ga0059261_3857	0.44	+0.5
3,961,290	+		Ga0059261_3857	0.44	+0.0
3,961,291	-		Ga0059261_3857	0.45	+0.6
3,961,291	-		Ga0059261_3857	0.45	-0.1
3,961,291	-		Ga0059261_3857	0.45	-0.4
3,961,291	-		Ga0059261_3857	0.45	-0.2
3,961,291	-		Ga0059261_3857	0.45	-0.1
3,961,356	+		Ga0059261_3857	0.49	-0.2
3,961,356	+		Ga0059261_3857	0.49	-0.2
3,961,357	-		Ga0059261_3857	0.49	+0.1
3,961,357	-		Ga0059261_3857	0.49	+0.0
3,961,701	+		Ga0059261_3857	0.74	-0.1
3,961,701	+		Ga0059261_3857	0.74	-0.6
3,961,702	-		Ga0059261_3857	0.74	-0.6
3,961,965	+				-0.4
3,961,965	+				+1.5
3,961,966	-				+0.2
3,961,966	-				+0.3
3,961,966	-				-1.5
3,961,966	-				+0.2
3,961,966	-				-0.3
3,961,966	-				-0.0
3,962,001	+				+1.0
3,962,001	+				-0.4
3,962,002	-				-0.7
3,962,002	-				+0.0
3,962,002	-				+0.2
3,962,067	+				+0.2
3,962,067	+				-0.9
3,962,068	-				+0.1
3,962,068	-				+0.5
3,962,068	-				-0.8
3,962,068	-				-0.7
3,962,068	-				-0.5
3,962,068	-				+0.7
3,962,200	-				+0.6
3,962,236	+				-0.5
3,962,285	-				+0.4
3,962,348	+		Ga0059261_3858	0.11	-0.4
3,962,659	+		Ga0059261_3858	0.24	-0.0
3,962,659	+		Ga0059261_3858	0.24	+0.8
3,962,659	+		Ga0059261_3858	0.24	+0.5
3,962,659	+		Ga0059261_3858	0.24	-0.5
3,962,659	+		Ga0059261_3858	0.24	-0.2
3,962,659	+				+1.0
3,962,659	+		Ga0059261_3858	0.24	-0.5
3,962,659	+		Ga0059261_3858	0.24	+0.5
3,962,659	+		Ga0059261_3858	0.24	+0.1
3,962,659	+		Ga0059261_3858	0.24	+1.5
3,962,659	+		Ga0059261_3858	0.24	+0.3
3,962,659	+		Ga0059261_3858	0.24	+0.9
3,962,660	-		Ga0059261_3858	0.24	-1.0
3,962,660	-		Ga0059261_3858	0.24	-0.1
3,962,660	-		Ga0059261_3858	0.24	+0.2
3,962,660	-		Ga0059261_3858	0.24	+0.7
3,962,660	-		Ga0059261_3858	0.24	-0.1
3,962,660	-		Ga0059261_3858	0.24	+0.1
3,962,660	-		Ga0059261_3858	0.24	+0.0
3,962,660	-		Ga0059261_3858	0.24	+0.9
3,962,660	-		Ga0059261_3858	0.24	+0.4
3,962,660	-		Ga0059261_3858	0.24	+0.5
3,962,663	+		Ga0059261_3858	0.24	+0.3
3,962,663	+		Ga0059261_3858	0.24	+0.2
3,962,663	+		Ga0059261_3858	0.24	-0.1
3,962,663	+		Ga0059261_3858	0.24	-1.3
3,962,663	+		Ga0059261_3858	0.24	-0.1
3,962,663	+		Ga0059261_3858	0.24	+0.3
3,962,663	+		Ga0059261_3858	0.24	+0.0
3,962,663	+		Ga0059261_3858	0.24	+0.5
3,962,663	+		Ga0059261_3858	0.24	-0.3
3,962,663	+		Ga0059261_3858	0.24	-0.6
3,962,663	+		Ga0059261_3858	0.24	-0.3
3,962,663	+		Ga0059261_3858	0.24	-0.8
3,962,663	+		Ga0059261_3858	0.24	+0.3
3,962,663	+		Ga0059261_3858	0.24	+0.7
3,962,663	+		Ga0059261_3858	0.24	-0.5
3,962,663	+		Ga0059261_3858	0.24	+0.7
3,962,663	+		Ga0059261_3858	0.24	+1.0
3,962,664	-		Ga0059261_3858	0.24	-1.1
3,962,664	-		Ga0059261_3858	0.24	-0.3
3,962,664	-		Ga0059261_3858	0.24	+0.4
3,962,664	-		Ga0059261_3858	0.24	-1.2
3,962,664	-				+0.5
3,962,664	-		Ga0059261_3858	0.24	-1.5
3,962,664	-		Ga0059261_3858	0.24	+1.0
3,962,664	-		Ga0059261_3858	0.24	+0.5
3,962,664	-		Ga0059261_3858	0.24	+0.3
3,962,664	-		Ga0059261_3858	0.24	+0.8
3,962,664	-		Ga0059261_3858	0.24	+0.6
3,962,664	-		Ga0059261_3858	0.24	-1.5
3,962,664	-		Ga0059261_3858	0.24	-0.1
3,962,664	-		Ga0059261_3858	0.24	-2.1
3,962,664	-		Ga0059261_3858	0.24	-0.3
3,962,664	-		Ga0059261_3858	0.24	+0.0
3,962,664	-		Ga0059261_3858	0.24	-0.2
3,962,664	-		Ga0059261_3858	0.24	+0.1
3,962,664	-		Ga0059261_3858	0.24	+0.4
3,962,664	-		Ga0059261_3858	0.24	-0.2
3,962,664	-		Ga0059261_3858	0.24	-0.2
3,962,665	+		Ga0059261_3858	0.24	-0.4
3,962,665	+		Ga0059261_3858	0.24	-0.0
3,962,665	+		Ga0059261_3858	0.24	+0.2
3,962,665	+		Ga0059261_3858	0.24	-0.9
3,962,665	+		Ga0059261_3858	0.24	-0.1
3,962,665	+		Ga0059261_3858	0.24	-0.1
3,962,665	+		Ga0059261_3858	0.24	+0.3
3,962,665	+		Ga0059261_3858	0.24	-0.3
3,962,665	+		Ga0059261_3858	0.24	+0.3
3,962,666	-		Ga0059261_3858	0.24	+2.3
3,962,666	-		Ga0059261_3858	0.24	+0.1
3,962,666	-		Ga0059261_3858	0.24	-0.7
3,962,666	-		Ga0059261_3858	0.24	+0.3
3,962,666	-		Ga0059261_3858	0.24	-2.5
3,962,666	-		Ga0059261_3858	0.24	+0.3
3,962,666	-		Ga0059261_3858	0.24	-0.5
3,962,666	-		Ga0059261_3858	0.24	-0.2
3,962,666	-		Ga0059261_3858	0.24	-0.3
3,962,666	-		Ga0059261_3858	0.24	-0.2
3,962,666	-		Ga0059261_3858	0.24	-0.3
3,962,666	-		Ga0059261_3858	0.24	+0.1
3,962,666	-		Ga0059261_3858	0.24	+0.0
3,962,666	-		Ga0059261_3858	0.24	-0.0
3,962,666	-		Ga0059261_3858	0.24	-0.2
3,962,666	-		Ga0059261_3858	0.24	-0.1
3,962,666	-		Ga0059261_3858	0.24	+0.5
3,962,666	-		Ga0059261_3858	0.24	+0.6
3,962,666	-		Ga0059261_3858	0.24	+0.8
3,962,839	+		Ga0059261_3858	0.31	+1.1
3,962,839	+		Ga0059261_3858	0.31	+0.3
3,962,839	+		Ga0059261_3858	0.31	+0.1
3,962,839	+		Ga0059261_3858	0.31	+0.9
3,962,839	+		Ga0059261_3858	0.31	-1.0
3,962,839	+		Ga0059261_3858	0.31	+0.8
3,962,839	+		Ga0059261_3858	0.31	-0.7
3,962,839	+		Ga0059261_3858	0.31	+0.5
3,962,840	-		Ga0059261_3858	0.31	-0.9
3,962,840	-		Ga0059261_3858	0.31	+0.5
3,962,840	-		Ga0059261_3858	0.31	+0.1
3,962,840	-		Ga0059261_3858	0.31	+0.2
3,962,842	+		Ga0059261_3858	0.31	+0.2
3,962,842	+		Ga0059261_3858	0.31	-0.2
3,962,842	+		Ga0059261_3858	0.31	+1.2
3,962,843	-		Ga0059261_3858	0.31	+1.5
3,962,843	-		Ga0059261_3858	0.31	-0.2
3,962,843	-		Ga0059261_3858	0.31	+0.2
3,962,843	-		Ga0059261_3858	0.31	+0.1
3,962,843	-		Ga0059261_3858	0.31	+0.7
3,962,843	-		Ga0059261_3858	0.31	+0.8
3,962,843	-		Ga0059261_3858	0.31	-0.2