Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3518

Experiment: Spectinomycin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 2 mg/ml
3,639,769	+				-0.6
3,639,769	+				-0.6
3,639,769	+				+0.4
3,639,769	+				+0.8
3,639,770	-				+1.8
3,639,770	-				+0.6
3,639,915	+		Ga0059261_3517	0.14	+0.3
3,639,915	+		Ga0059261_3517	0.14	+0.0
3,639,915	+		Ga0059261_3517	0.14	+0.6
3,639,915	+		Ga0059261_3517	0.14	-0.1
3,639,915	+		Ga0059261_3517	0.14	-0.3
3,639,915	+		Ga0059261_3517	0.14	-0.5
3,639,915	+		Ga0059261_3517	0.14	+0.4
3,639,915	+		Ga0059261_3517	0.14	+0.6
3,639,916	-		Ga0059261_3517	0.14	-0.2
3,639,916	-		Ga0059261_3517	0.14	+0.4
3,639,916	-		Ga0059261_3517	0.14	+1.1
3,639,916	-		Ga0059261_3517	0.14	+0.0
3,639,916	-		Ga0059261_3517	0.14	+0.7
3,639,916	-		Ga0059261_3517	0.14	-0.2
3,639,916	-		Ga0059261_3517	0.14	+0.1
3,639,972	-		Ga0059261_3517	0.20	-1.2
3,640,092	+		Ga0059261_3517	0.34	-0.1
3,640,092	+		Ga0059261_3517	0.34	-0.7
3,640,194	+		Ga0059261_3517	0.46	-0.3
3,640,194	+		Ga0059261_3517	0.46	+0.1
3,640,194	+		Ga0059261_3517	0.46	-0.1
3,640,194	+		Ga0059261_3517	0.46	+1.8
3,640,195	-		Ga0059261_3517	0.46	-0.1
3,640,195	-		Ga0059261_3517	0.46	-0.0
3,640,195	-		Ga0059261_3517	0.46	-0.5
3,640,195	-		Ga0059261_3517	0.46	+0.0
3,640,317	+		Ga0059261_3517	0.60	-0.1
3,640,317	+		Ga0059261_3517	0.60	+0.5
3,640,317	+		Ga0059261_3517	0.60	-0.8
3,640,317	+		Ga0059261_3517	0.60	+0.8
3,640,317	+		Ga0059261_3517	0.60	-1.0
3,640,317	+		Ga0059261_3517	0.60	-0.3
3,640,318	-		Ga0059261_3517	0.60	-0.7
3,640,318	-		Ga0059261_3517	0.60	+0.2
3,640,318	-		Ga0059261_3517	0.60	+0.8
3,640,318	-		Ga0059261_3517	0.60	-0.2
3,640,494	+		Ga0059261_3517	0.81	+1.1
3,640,494	+		Ga0059261_3517	0.81	-1.7
3,640,495	-		Ga0059261_3517	0.81	-0.5
3,640,495	-		Ga0059261_3517	0.81	+0.9
3,640,495	-		Ga0059261_3517	0.81	+0.2
3,640,495	-		Ga0059261_3517	0.81	+0.2
3,640,495	-		Ga0059261_3517	0.81	+0.6
3,640,548	+		Ga0059261_3517	0.87	+0.3
3,640,549	-		Ga0059261_3517	0.87	+0.2
3,640,549	-		Ga0059261_3517	0.87	-0.3
3,640,617	+				+0.1
3,640,631	+				+0.4
3,640,631	+				-0.8
3,640,632	-				-0.7
3,640,632	-				+2.5
3,640,632	-				+0.3
3,640,665	-				+0.5
3,640,673	+				+0.5
3,640,673	+				+0.1
3,640,674	-				-0.0
3,640,765	+				-1.3
3,640,765	+				+0.8
3,640,766	-				+0.1
3,640,766	-				+0.7
3,640,766	-				+0.7
3,640,766	-				+0.6
3,640,855	+				+1.3
3,640,855	+				+0.2
3,640,855	+				+0.9
3,640,902	+		Ga0059261_3518	0.11	+0.6
3,640,902	+		Ga0059261_3518	0.11	-0.8
3,640,902	+		Ga0059261_3518	0.11	+0.5
3,640,902	+		Ga0059261_3518	0.11	+0.2
3,640,902	+		Ga0059261_3518	0.11	+0.4
3,640,902	+		Ga0059261_3518	0.11	+0.7
3,640,903	-		Ga0059261_3518	0.11	+1.2
3,640,903	-		Ga0059261_3518	0.11	+0.9
3,640,903	-		Ga0059261_3518	0.11	-0.0
3,640,903	-		Ga0059261_3518	0.11	+0.1
3,640,903	-		Ga0059261_3518	0.11	+0.6
3,640,903	-		Ga0059261_3518	0.11	-0.2
3,640,904	+		Ga0059261_3518	0.12	+0.5
3,640,904	+		Ga0059261_3518	0.12	+0.3
3,640,905	-		Ga0059261_3518	0.12	+0.9
3,641,038	-		Ga0059261_3518	0.23	+1.0
3,641,400	+		Ga0059261_3518	0.53	-0.5
3,641,400	+		Ga0059261_3518	0.53	+1.1
3,641,400	+		Ga0059261_3518	0.53	+0.1
3,641,400	+		Ga0059261_3518	0.53	-0.9
3,641,400	+		Ga0059261_3518	0.53	+0.2
3,641,401	-		Ga0059261_3518	0.54	+0.1
3,641,401	-		Ga0059261_3518	0.54	+0.1
3,641,401	-		Ga0059261_3518	0.54	+0.8
3,641,401	-		Ga0059261_3518	0.54	+0.4
3,641,401	-		Ga0059261_3518	0.54	+1.9
3,641,496	+		Ga0059261_3518	0.62	+0.0
3,641,565	+		Ga0059261_3518	0.67	+0.2
3,641,565	+		Ga0059261_3518	0.67	+0.7
3,641,565	+		Ga0059261_3518	0.67	-0.3
3,641,565	+		Ga0059261_3518	0.67	+0.1
3,641,643	+		Ga0059261_3518	0.74	-0.0
3,641,643	+		Ga0059261_3518	0.74	+0.2
3,641,643	+		Ga0059261_3518	0.74	+0.3
3,641,643	+		Ga0059261_3518	0.74	+0.6
3,641,643	+		Ga0059261_3518	0.74	-1.5
3,641,643	+		Ga0059261_3518	0.74	+2.1
3,641,643	+		Ga0059261_3518	0.74	-0.2
3,641,644	-		Ga0059261_3518	0.74	+0.9
3,641,644	-		Ga0059261_3518	0.74	+0.7
3,641,644	-		Ga0059261_3518	0.74	-0.2
3,641,644	-		Ga0059261_3518	0.74	+0.5
3,641,644	-		Ga0059261_3518	0.74	+0.2
3,641,644	-		Ga0059261_3518	0.74	+0.0
3,641,644	-				-0.8
3,641,644	-		Ga0059261_3518	0.74	+0.3
3,641,644	-		Ga0059261_3518	0.74	+1.0
3,641,644	-		Ga0059261_3518	0.74	-1.1
3,641,703	+		Ga0059261_3518	0.79	-1.2
3,641,703	+		Ga0059261_3518	0.79	+0.3
3,641,703	+		Ga0059261_3518	0.79	-0.0
3,641,703	+		Ga0059261_3518	0.79	+0.8
3,641,703	+		Ga0059261_3518	0.79	+0.1
3,641,703	+		Ga0059261_3518	0.79	+1.0
3,641,703	+		Ga0059261_3518	0.79	-1.8
3,641,704	-		Ga0059261_3518	0.79	+0.2
3,641,704	-		Ga0059261_3518	0.79	+0.4
3,641,704	-		Ga0059261_3518	0.79	+0.8
3,641,704	-		Ga0059261_3518	0.79	-0.4
3,641,704	-		Ga0059261_3518	0.79	+0.1
3,641,704	-		Ga0059261_3518	0.79	-0.2
3,641,704	-		Ga0059261_3518	0.79	+0.5
3,641,704	-		Ga0059261_3518	0.79	+0.4
3,641,704	-		Ga0059261_3518	0.79	+0.9
3,641,704	-		Ga0059261_3518	0.79	+0.5
3,641,704	-		Ga0059261_3518	0.79	+0.7
3,641,949	+				-0.5
3,642,073	-				+0.8
3,642,114	+				+0.6
3,642,114	+				+1.0
3,642,114	+				-0.1
3,642,198	+				+1.2
3,642,198	+				-1.4
3,642,198	+				+0.6
3,642,198	+				+0.3
3,642,198	+				-1.1
3,642,198	+				-1.0
3,642,198	+				-0.0
3,642,198	+				-0.1
3,642,198	+				+0.0
3,642,198	+				-0.2
3,642,198	+				+0.0
3,642,198	+				+0.1
3,642,198	+				+0.5
3,642,199	-				+0.3
3,642,199	-				+0.7
3,642,199	-				+1.0
3,642,199	-				+0.9
3,642,199	-				-0.2
3,642,199	-				-1.8
3,642,199	-				+1.2
3,642,199	-				+0.2
3,642,199	-				-0.1
3,642,199	-				-0.2
3,642,199	-				-0.0
3,642,426	+				+0.5
3,642,426	+		Ga0059261_3519	0.14	+0.5
3,642,426	+		Ga0059261_3519	0.14	-0.2
3,642,426	+		Ga0059261_3519	0.14	+0.8
3,642,426	+		Ga0059261_3519	0.14	+0.4
3,642,426	+		Ga0059261_3519	0.14	+0.9
3,642,427	-		Ga0059261_3519	0.14	+0.2
3,642,427	-		Ga0059261_3519	0.14	-0.1
3,642,427	-		Ga0059261_3519	0.14	-0.1
3,642,428	+		Ga0059261_3519	0.15	-0.5
3,642,428	+		Ga0059261_3519	0.15	+0.1
3,642,428	+		Ga0059261_3519	0.15	+1.1
3,642,428	+		Ga0059261_3519	0.15	-1.0
3,642,428	+		Ga0059261_3519	0.15	-0.7
3,642,429	-		Ga0059261_3519	0.15	-0.2
3,642,438	+		Ga0059261_3519	0.15	-0.0
3,642,438	+		Ga0059261_3519	0.15	-0.6
3,642,438	+		Ga0059261_3519	0.15	-0.4
3,642,438	+		Ga0059261_3519	0.15	-0.0
3,642,438	+		Ga0059261_3519	0.15	+0.4
3,642,438	+		Ga0059261_3519	0.15	-0.4
3,642,438	+		Ga0059261_3519	0.15	-0.6
3,642,438	+		Ga0059261_3519	0.15	+0.2
3,642,438	+		Ga0059261_3519	0.15	+0.9
3,642,438	+		Ga0059261_3519	0.15	-0.1
3,642,439	-		Ga0059261_3519	0.15	-0.2
3,642,439	-		Ga0059261_3519	0.15	+0.0
3,642,439	-		Ga0059261_3519	0.15	+0.8
3,642,439	-		Ga0059261_3519	0.15	+1.2
3,642,443	-		Ga0059261_3519	0.15	+0.3
3,642,516	+		Ga0059261_3519	0.17	+0.6
3,642,517	-		Ga0059261_3519	0.17	-0.1
3,642,517	-				+0.5
3,642,518	+		Ga0059261_3519	0.17	+0.7
3,642,518	+		Ga0059261_3519	0.17	-1.2
3,642,518	+		Ga0059261_3519	0.17	+0.3
3,642,518	+		Ga0059261_3519	0.17	+0.2
3,642,518	+		Ga0059261_3519	0.17	+0.8
3,642,518	+		Ga0059261_3519	0.17	+0.9
3,642,518	+		Ga0059261_3519	0.17	+1.1
3,642,518	+		Ga0059261_3519	0.17	+0.2
3,642,518	+		Ga0059261_3519	0.17	+0.6
3,642,518	+				+1.1
3,642,518	+		Ga0059261_3519	0.17	-0.7
3,642,519	-		Ga0059261_3519	0.17	-0.5
3,642,519	-		Ga0059261_3519	0.17	-0.5
3,642,519	-		Ga0059261_3519	0.17	+0.3
3,642,519	-		Ga0059261_3519	0.17	+0.8
3,642,519	-		Ga0059261_3519	0.17	+1.0
3,642,519	-		Ga0059261_3519	0.17	+0.1
3,642,519	-		Ga0059261_3519	0.17	+0.9
3,642,519	-		Ga0059261_3519	0.17	+0.6
3,642,519	-		Ga0059261_3519	0.17	+1.5
3,642,519	-		Ga0059261_3519	0.17	+1.0
3,642,521	+				-1.1
3,642,521	+		Ga0059261_3519	0.17	+0.5
3,642,521	+		Ga0059261_3519	0.17	-0.1
3,642,521	+		Ga0059261_3519	0.17	+0.0
3,642,521	+		Ga0059261_3519	0.17	+0.2
3,642,521	+		Ga0059261_3519	0.17	+0.3
3,642,522	-		Ga0059261_3519	0.17	-0.8
3,642,522	-		Ga0059261_3519	0.17	+0.5
3,642,522	-		Ga0059261_3519	0.17	+0.1
3,642,798	+		Ga0059261_3519	0.26	-0.4
3,642,798	+		Ga0059261_3519	0.26	-0.5
3,642,798	+		Ga0059261_3519	0.26	+0.4
3,642,798	+		Ga0059261_3519	0.26	-1.1
3,642,798	+		Ga0059261_3519	0.26	+0.1
3,642,799	-		Ga0059261_3519	0.26	+0.5
3,642,799	-		Ga0059261_3519	0.26	+0.5
3,642,799	-		Ga0059261_3519	0.26	+0.2
3,642,799	-		Ga0059261_3519	0.26	-0.7
3,642,800	+		Ga0059261_3519	0.26	+0.7
3,642,800	+		Ga0059261_3519	0.26	-0.6
3,642,800	+		Ga0059261_3519	0.26	-0.4
3,642,800	+		Ga0059261_3519	0.26	+0.7
3,642,800	+		Ga0059261_3519	0.26	-0.2
3,642,801	-				+2.3
3,642,801	-		Ga0059261_3519	0.26	+0.0
3,642,801	-		Ga0059261_3519	0.26	-0.1
3,642,801	-		Ga0059261_3519	0.26	+1.2
3,642,814	-		Ga0059261_3519	0.27	+0.9
3,642,943	-		Ga0059261_3519	0.31	+1.2
3,642,943	-		Ga0059261_3519	0.31	-0.4
3,642,943	-		Ga0059261_3519	0.31	-0.4