Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3261

Experiment: Spectinomycin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 2 mg/ml
3,393,759	+		Ga0059261_3260	0.13	-1.9
3,393,759	+		Ga0059261_3260	0.13	+0.4
3,393,759	+		Ga0059261_3260	0.13	-0.2
3,393,759	+		Ga0059261_3260	0.13	-1.1
3,393,759	+		Ga0059261_3260	0.13	-1.1
3,393,759	+		Ga0059261_3260	0.13	-0.1
3,393,759	+		Ga0059261_3260	0.13	+0.2
3,393,759	+		Ga0059261_3260	0.13	-0.5
3,393,759	+		Ga0059261_3260	0.13	+0.2
3,393,760	-		Ga0059261_3260	0.13	-0.9
3,393,760	-		Ga0059261_3260	0.13	+0.1
3,393,760	-		Ga0059261_3260	0.13	-0.5
3,393,760	-		Ga0059261_3260	0.13	-0.5
3,393,760	-		Ga0059261_3260	0.13	-0.4
3,393,760	-		Ga0059261_3260	0.13	-0.1
3,393,760	-		Ga0059261_3260	0.13	+0.1
3,393,760	-		Ga0059261_3260	0.13	+0.2
3,393,760	-		Ga0059261_3260	0.13	-0.3
3,393,760	-		Ga0059261_3260	0.13	+0.5
3,393,760	-		Ga0059261_3260	0.13	+0.2
3,393,852	+		Ga0059261_3260	0.21	+0.1
3,393,852	+		Ga0059261_3260	0.21	-0.0
3,393,852	+		Ga0059261_3260	0.21	+1.3
3,393,852	+		Ga0059261_3260	0.21	+0.1
3,393,853	-		Ga0059261_3260	0.21	+0.6
3,393,853	-		Ga0059261_3260	0.21	-1.9
3,393,853	-		Ga0059261_3260	0.21	+1.4
3,393,853	-		Ga0059261_3260	0.21	-0.8
3,393,853	-		Ga0059261_3260	0.21	+0.3
3,393,992	+		Ga0059261_3260	0.34	-0.2
3,393,992	+		Ga0059261_3260	0.34	+0.5
3,393,993	-		Ga0059261_3260	0.34	+0.5
3,393,995	+		Ga0059261_3260	0.34	+0.0
3,393,995	+		Ga0059261_3260	0.34	-0.3
3,393,995	+		Ga0059261_3260	0.34	+0.3
3,393,995	+		Ga0059261_3260	0.34	+0.2
3,393,995	+		Ga0059261_3260	0.34	+0.0
3,393,995	+		Ga0059261_3260	0.34	-0.3
3,393,995	+		Ga0059261_3260	0.34	-1.7
3,393,996	-		Ga0059261_3260	0.34	-0.5
3,393,996	-		Ga0059261_3260	0.34	+0.1
3,393,996	-		Ga0059261_3260	0.34	+0.4
3,393,996	-		Ga0059261_3260	0.34	-0.0
3,393,996	-		Ga0059261_3260	0.34	+0.0
3,393,996	-		Ga0059261_3260	0.34	-0.1
3,393,996	-		Ga0059261_3260	0.34	+1.1
3,393,996	-		Ga0059261_3260	0.34	-0.1
3,393,996	-		Ga0059261_3260	0.34	-0.1
3,393,996	-		Ga0059261_3260	0.34	-2.0
3,394,029	+		Ga0059261_3260	0.37	+0.0
3,394,029	+		Ga0059261_3260	0.37	-0.5
3,394,029	+		Ga0059261_3260	0.37	+1.0
3,394,029	+		Ga0059261_3260	0.37	-0.8
3,394,029	+		Ga0059261_3260	0.37	+0.2
3,394,029	+		Ga0059261_3260	0.37	+1.1
3,394,029	+		Ga0059261_3260	0.37	-0.0
3,394,029	+		Ga0059261_3260	0.37	-0.0
3,394,030	-		Ga0059261_3260	0.37	-0.3
3,394,030	-		Ga0059261_3260	0.37	-0.3
3,394,122	+		Ga0059261_3260	0.46	-0.4
3,394,122	+		Ga0059261_3260	0.46	+0.0
3,394,122	+				+0.5
3,394,122	+		Ga0059261_3260	0.46	-1.1
3,394,123	-		Ga0059261_3260	0.46	-0.1
3,394,123	-		Ga0059261_3260	0.46	+0.3
3,394,123	-		Ga0059261_3260	0.46	+0.1
3,394,123	-		Ga0059261_3260	0.46	+2.1
3,394,203	+		Ga0059261_3260	0.53	-0.4
3,394,203	+		Ga0059261_3260	0.53	-0.2
3,394,204	-		Ga0059261_3260	0.53	-0.7
3,394,204	-		Ga0059261_3260	0.53	+0.5
3,394,204	-				+1.1
3,394,204	-		Ga0059261_3260	0.53	+0.1
3,394,204	-		Ga0059261_3260	0.53	+0.2
3,394,204	-		Ga0059261_3260	0.53	+0.0
3,394,401	+		Ga0059261_3260	0.71	-1.5
3,394,401	+		Ga0059261_3260	0.71	+0.0
3,394,402	-		Ga0059261_3260	0.71	+0.5
3,394,497	+		Ga0059261_3260	0.79	-0.3
3,394,498	-		Ga0059261_3260	0.79	+0.8
3,394,503	+		Ga0059261_3260	0.80	+0.1
3,394,503	+		Ga0059261_3260	0.80	-0.2
3,394,504	-				-0.8
3,394,504	-		Ga0059261_3260	0.80	-0.8
3,394,504	-		Ga0059261_3260	0.80	+1.1
3,394,504	-		Ga0059261_3260	0.80	-0.1
3,394,504	-		Ga0059261_3260	0.80	+1.8
3,394,543	+		Ga0059261_3260	0.83	+0.0
3,394,544	-		Ga0059261_3260	0.83	+0.2
3,394,544	-		Ga0059261_3260	0.83	-0.9
3,394,544	-		Ga0059261_3260	0.83	-0.2
3,394,572	+		Ga0059261_3260	0.86	+1.3
3,394,765	+				+0.5
3,394,898	+		Ga0059261_3261	0.27	+0.6
3,394,898	+		Ga0059261_3261	0.27	+0.8
3,394,898	+		Ga0059261_3261	0.27	+0.3
3,394,898	+		Ga0059261_3261	0.27	+0.8
3,394,899	-		Ga0059261_3261	0.27	-0.0
3,394,899	-		Ga0059261_3261	0.27	+0.2
3,394,899	-		Ga0059261_3261	0.27	-0.1
3,394,899	-		Ga0059261_3261	0.27	+0.4
3,395,083	+		Ga0059261_3261	0.56	+0.7
3,395,083	+		Ga0059261_3261	0.56	+1.5
3,395,083	+		Ga0059261_3261	0.56	+0.3
3,395,083	+		Ga0059261_3261	0.56	+0.4
3,395,083	+		Ga0059261_3261	0.56	+0.2
3,395,083	+		Ga0059261_3261	0.56	-0.9
3,395,083	+		Ga0059261_3261	0.56	+0.3
3,395,084	-		Ga0059261_3261	0.56	+0.1
3,395,084	-		Ga0059261_3261	0.56	-0.4
3,395,084	-		Ga0059261_3261	0.56	-0.2
3,395,084	-		Ga0059261_3261	0.56	+0.1
3,395,084	-		Ga0059261_3261	0.56	+0.1
3,395,084	-		Ga0059261_3261	0.56	+0.0
3,395,084	-		Ga0059261_3261	0.56	-0.1
3,395,162	+		Ga0059261_3261	0.69	+1.0
3,395,162	+		Ga0059261_3261	0.69	+0.6
3,395,162	+		Ga0059261_3261	0.69	-0.2
3,395,163	-		Ga0059261_3261	0.69	-0.2
3,395,348	+				-0.4
3,395,348	+				+0.3
3,395,349	-				-1.0
3,395,357	+				+0.1
3,395,423	+				-0.0
3,395,423	+				-0.2
3,395,423	+				+0.1
3,395,423	+				+0.4
3,395,423	+				+0.3
3,395,423	+				-0.0
3,395,424	-				-0.2
3,395,424	-				-0.8
3,395,424	-				-0.9
3,395,424	-				-0.5
3,395,424	-				-0.3
3,395,424	-				+0.4
3,395,424	-				+0.4
3,395,424	-				-0.4
3,395,424	-				+0.0
3,395,495	+		Ga0059261_3262	0.15	+0.6
3,395,495	+		Ga0059261_3262	0.15	+0.3
3,395,495	+		Ga0059261_3262	0.15	-3.1
3,395,495	+		Ga0059261_3262	0.15	+0.3
3,395,495	+		Ga0059261_3262	0.15	+0.5
3,395,495	+		Ga0059261_3262	0.15	+1.2
3,395,495	+		Ga0059261_3262	0.15	-0.0
3,395,495	+		Ga0059261_3262	0.15	+0.3
3,395,496	-		Ga0059261_3262	0.16	+0.2
3,395,496	-		Ga0059261_3262	0.16	+0.2
3,395,496	-		Ga0059261_3262	0.16	+0.3
3,395,501	+				-0.5
3,395,501	+		Ga0059261_3262	0.16	+0.2
3,395,501	+		Ga0059261_3262	0.16	+0.2
3,395,502	-		Ga0059261_3262	0.16	-0.5
3,395,529	-		Ga0059261_3262	0.19	-0.6
3,396,270	+				+0.4
3,396,270	+				-0.2
3,396,271	-				+0.5