Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1381

Experiment: Spectinomycin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 2 mg/ml
1,454,993	-		Ga0059261_1380	0.34	+0.4
1,455,012	+		Ga0059261_1380	0.35	-0.1
1,455,171	+		Ga0059261_1380	0.49	+1.3
1,455,171	+		Ga0059261_1380	0.49	+1.1
1,455,207	+		Ga0059261_1380	0.52	+0.9
1,455,207	+		Ga0059261_1380	0.52	+0.6
1,455,207	+		Ga0059261_1380	0.52	+1.3
1,455,207	+		Ga0059261_1380	0.52	+0.6
1,455,207	+		Ga0059261_1380	0.52	+0.9
1,455,207	+		Ga0059261_1380	0.52	+1.0
1,455,207	+		Ga0059261_1380	0.52	+0.9
1,455,208	-		Ga0059261_1380	0.52	+1.3
1,455,208	-				+1.7
1,455,208	-		Ga0059261_1380	0.52	+1.0
1,455,208	-		Ga0059261_1380	0.52	+1.1
1,455,208	-		Ga0059261_1380	0.52	-0.1
1,455,208	-		Ga0059261_1380	0.52	+0.7
1,455,208	-		Ga0059261_1380	0.52	+0.9
1,455,208	-		Ga0059261_1380	0.52	+0.4
1,455,318	-		Ga0059261_1380	0.61	+1.1
1,455,370	-		Ga0059261_1380	0.66	+1.1
1,455,371	+		Ga0059261_1380	0.66	+0.9
1,455,371	+		Ga0059261_1380	0.66	+0.8
1,455,371	+		Ga0059261_1380	0.66	+1.2
1,455,371	+		Ga0059261_1380	0.66	+0.4
1,455,371	+		Ga0059261_1380	0.66	+0.0
1,455,371	+		Ga0059261_1380	0.66	+0.7
1,455,371	+		Ga0059261_1380	0.66	+1.2
1,455,371	+		Ga0059261_1380	0.66	+1.1
1,455,371	+		Ga0059261_1380	0.66	+0.3
1,455,372	-		Ga0059261_1380	0.66	+0.5
1,455,372	-				+0.6
1,455,372	-				+2.9
1,455,501	+		Ga0059261_1380	0.77	+0.3
1,455,502	-		Ga0059261_1380	0.77	+1.9
1,455,558	+		Ga0059261_1380	0.82	+0.3
1,455,559	-		Ga0059261_1380	0.82	+0.9
1,455,559	-		Ga0059261_1380	0.82	+0.6
1,455,567	+		Ga0059261_1380	0.82	+0.8
1,455,568	-		Ga0059261_1380	0.83	+1.3
1,455,568	-		Ga0059261_1380	0.83	+0.4
1,455,603	+		Ga0059261_1380	0.85	+0.5
1,455,603	+		Ga0059261_1380	0.85	-0.0
1,455,603	+		Ga0059261_1380	0.85	+1.9
1,455,603	+		Ga0059261_1380	0.85	-1.0
1,455,603	+		Ga0059261_1380	0.85	+0.4
1,455,604	-		Ga0059261_1380	0.86	+1.1
1,455,604	-		Ga0059261_1380	0.86	+1.3
1,455,604	-		Ga0059261_1380	0.86	-0.1
1,455,606	+		Ga0059261_1380	0.86	+0.6
1,455,606	+		Ga0059261_1380	0.86	+1.0
1,455,606	+		Ga0059261_1380	0.86	+2.6
1,455,606	+		Ga0059261_1380	0.86	+1.6
1,455,606	+		Ga0059261_1380	0.86	+0.9
1,455,607	-		Ga0059261_1380	0.86	+0.6
1,455,607	-		Ga0059261_1380	0.86	+0.4
1,455,607	-		Ga0059261_1380	0.86	+1.3
1,455,607	-		Ga0059261_1380	0.86	+0.3
1,455,607	-		Ga0059261_1380	0.86	-0.2
1,455,675	+				+0.6
1,455,675	+				+0.6
1,455,676	-				+2.2
1,456,249	+		Ga0059261_1381	0.55	+2.6
1,456,249	+		Ga0059261_1381	0.55	+1.4
1,456,250	-		Ga0059261_1381	0.56	+0.9
1,456,271	+		Ga0059261_1381	0.58	+1.1
1,456,272	-		Ga0059261_1381	0.58	+1.6
1,456,283	+		Ga0059261_1381	0.59	+1.4
1,456,369	+		Ga0059261_1381	0.69	+0.3
1,456,466	+		Ga0059261_1381	0.81	+1.1
1,456,466	+		Ga0059261_1381	0.81	+1.4
1,456,467	-		Ga0059261_1381	0.81	+0.2
1,456,467	-		Ga0059261_1381	0.81	+0.8
1,456,500	-		Ga0059261_1381	0.84	-0.5
1,456,527	-		Ga0059261_1381	0.88	-0.5
1,456,601	+				+1.0
1,456,601	+				+0.6
1,456,602	-				+1.0
1,456,686	-				-0.5
1,456,704	+				-0.5
1,456,705	-				-0.8
1,456,705	-				-0.4
1,456,705	-				+2.2
1,456,705	-				-0.3
1,456,705	-				-1.1
1,456,705	-				+0.5
1,456,705	-				+0.2
1,456,718	-				-0.6
1,456,718	-				+0.4
1,456,794	+				-1.8
1,456,800	+				-0.2
1,456,800	+				-0.4
1,456,800	+				-1.4
1,456,800	+				+0.2
1,456,800	+				-0.2
1,456,800	+				+0.6
1,456,801	-				-1.4
1,456,801	-				+1.0
1,456,801	-				+0.6
1,456,801	-				-0.3
1,456,801	-				+0.2
1,456,801	-				+0.6
1,456,801	-				+1.0
1,456,951	+		Ga0059261_1382	0.14	-0.0
1,456,951	+		Ga0059261_1382	0.14	-0.9
1,457,127	+		Ga0059261_1382	0.26	-1.6
1,457,127	+		Ga0059261_1382	0.26	-0.7
1,457,127	+		Ga0059261_1382	0.26	-2.0
1,457,127	+		Ga0059261_1382	0.26	-0.2
1,457,127	+		Ga0059261_1382	0.26	-0.4
1,457,128	-		Ga0059261_1382	0.26	-0.7
1,457,196	-		Ga0059261_1382	0.30	-1.8
1,457,196	-				-0.4
1,457,196	-		Ga0059261_1382	0.30	-0.4
1,457,217	+		Ga0059261_1382	0.31	+1.2
1,457,217	+		Ga0059261_1382	0.31	+1.6
1,457,217	+		Ga0059261_1382	0.31	-0.5
1,457,217	+		Ga0059261_1382	0.31	-0.9
1,457,217	+		Ga0059261_1382	0.31	-0.9
1,457,217	+		Ga0059261_1382	0.31	-0.8
1,457,218	-		Ga0059261_1382	0.31	+1.6
1,457,218	-		Ga0059261_1382	0.31	-1.8
1,457,218	-		Ga0059261_1382	0.31	+0.6
1,457,218	-		Ga0059261_1382	0.31	-0.8
1,457,218	-		Ga0059261_1382	0.31	+2.2
1,457,218	-		Ga0059261_1382	0.31	+0.6
1,457,263	+		Ga0059261_1382	0.34	-1.0
1,457,263	+		Ga0059261_1382	0.34	-0.7
1,457,263	+		Ga0059261_1382	0.34	-1.0
1,457,411	+		Ga0059261_1382	0.44	-1.1
1,457,411	+		Ga0059261_1382	0.44	-0.4
1,457,412	-		Ga0059261_1382	0.44	+0.2
1,457,412	-		Ga0059261_1382	0.44	-0.1
1,457,529	+		Ga0059261_1382	0.51	+0.3
1,457,529	+		Ga0059261_1382	0.51	-0.0
1,457,529	+		Ga0059261_1382	0.51	-0.1
1,457,529	+		Ga0059261_1382	0.51	+0.6
1,457,530	-				+0.6
1,457,530	-		Ga0059261_1382	0.51	-0.0
1,457,530	-		Ga0059261_1382	0.51	-1.4
1,457,530	-		Ga0059261_1382	0.51	-2.1
1,457,530	-		Ga0059261_1382	0.51	-1.8