Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_0984

Experiment: Spectinomycin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 2 mg/ml
1,017,287	+		Ga0059261_0983	0.74	-0.1
1,017,288	-		Ga0059261_0983	0.74	+0.1
1,017,413	+		Ga0059261_0983	0.78	-0.2
1,017,413	+		Ga0059261_0983	0.78	-0.8
1,017,413	+		Ga0059261_0983	0.78	+1.3
1,017,414	-		Ga0059261_0983	0.78	+0.5
1,017,416	+		Ga0059261_0983	0.78	-0.8
1,017,416	+		Ga0059261_0983	0.78	+0.5
1,017,416	+		Ga0059261_0983	0.78	+0.3
1,017,416	+		Ga0059261_0983	0.78	-0.5
1,017,416	+		Ga0059261_0983	0.78	+0.2
1,017,416	+		Ga0059261_0983	0.78	-0.9
1,017,417	-		Ga0059261_0983	0.78	-0.3
1,017,417	-		Ga0059261_0983	0.78	+0.4
1,017,417	-		Ga0059261_0983	0.78	+0.5
1,017,417	-		Ga0059261_0983	0.78	-1.6
1,017,480	-		Ga0059261_0983	0.80	-1.6
1,017,584	+		Ga0059261_0983	0.83	-0.7
1,017,602	-		Ga0059261_0983	0.84	-0.7
1,017,602	-		Ga0059261_0983	0.84	-0.9
1,017,605	+		Ga0059261_0983	0.84	-1.8
1,017,605	+		Ga0059261_0983	0.84	-0.7
1,017,605	+		Ga0059261_0983	0.84	-1.0
1,017,605	+		Ga0059261_0983	0.84	+0.3
1,017,605	+		Ga0059261_0983	0.84	-0.9
1,017,605	+		Ga0059261_0983	0.84	-0.4
1,017,605	+		Ga0059261_0983	0.84	-1.0
1,017,606	-		Ga0059261_0983	0.84	-0.9
1,017,606	-		Ga0059261_0983	0.84	-1.8
1,017,606	-		Ga0059261_0983	0.84	-0.9
1,017,606	-		Ga0059261_0983	0.84	+0.5
1,017,606	-		Ga0059261_0983	0.84	-0.9
1,017,606	-		Ga0059261_0983	0.84	-1.5
1,017,634	+		Ga0059261_0983	0.85	-0.9
1,017,647	+		Ga0059261_0983	0.85	+0.9
1,017,647	+		Ga0059261_0983	0.85	+0.7
1,017,652	+		Ga0059261_0983	0.86	-1.0
1,017,652	+		Ga0059261_0983	0.86	-1.0
1,017,653	-		Ga0059261_0983	0.86	+0.1
1,017,860	+				+1.0
1,017,860	+				+0.2
1,017,861	-				-1.8
1,017,861	-				-0.4
1,017,882	-				-0.5
1,017,882	-				+0.3
1,017,882	-				+0.2
1,017,883	+				+0.1
1,017,883	+				+2.5
1,017,883	+				-0.9
1,017,883	+				-0.8
1,017,884	-				+0.5
1,017,884	-				+0.1
1,017,884	-				+0.4
1,017,921	-				-0.8
1,017,921	-				+0.5
1,017,954	-				-1.5
1,017,982	-				-0.5
1,018,016	-				+0.3
1,018,076	+				-0.0
1,018,076	+				-1.0
1,018,077	-				+0.9
1,018,077	-				-0.1
1,018,100	+				-1.6
1,018,100	+				-1.7
1,018,199	-				-0.7
1,018,199	-				-0.1
1,018,223	+				-0.0
1,018,223	+				+0.2
1,018,223	+				+1.5
1,018,224	-				+1.0
1,018,224	-				+0.2
1,018,240	+				+0.8
1,018,240	+				-0.1
1,018,241	-				-2.0
1,018,519	+		Ga0059261_0984	0.32	+0.2
1,018,519	+		Ga0059261_0984	0.32	-1.3
1,018,519	+		Ga0059261_0984	0.32	-0.2
1,018,519	+		Ga0059261_0984	0.32	-0.1
1,018,519	+		Ga0059261_0984	0.32	+0.7
1,018,519	+		Ga0059261_0984	0.32	+0.4
1,018,520	-		Ga0059261_0984	0.32	-0.0
1,018,520	-		Ga0059261_0984	0.32	-0.0
1,018,520	-		Ga0059261_0984	0.32	-0.3
1,018,520	-		Ga0059261_0984	0.32	+0.5
1,018,520	-				+0.5
1,018,520	-		Ga0059261_0984	0.32	+1.7
1,018,520	-		Ga0059261_0984	0.32	+0.2
1,018,520	-		Ga0059261_0984	0.32	-0.0
1,018,536	+		Ga0059261_0984	0.33	+0.6
1,018,536	+		Ga0059261_0984	0.33	+1.2
1,018,536	+		Ga0059261_0984	0.33	+1.1
1,018,537	-		Ga0059261_0984	0.34	-1.0
1,018,537	-		Ga0059261_0984	0.34	+0.4
1,018,537	-		Ga0059261_0984	0.34	+1.4
1,018,607	+		Ga0059261_0984	0.41	+0.5
1,018,607	+		Ga0059261_0984	0.41	-1.3
1,018,607	+		Ga0059261_0984	0.41	+0.2
1,018,607	+		Ga0059261_0984	0.41	+0.5
1,018,607	+		Ga0059261_0984	0.41	+0.0
1,018,607	+		Ga0059261_0984	0.41	+0.1
1,018,608	-		Ga0059261_0984	0.41	+0.1
1,018,608	-		Ga0059261_0984	0.41	+0.1
1,018,608	-		Ga0059261_0984	0.41	+0.5
1,018,608	-		Ga0059261_0984	0.41	+0.1
1,018,608	-		Ga0059261_0984	0.41	+0.2
1,018,608	-		Ga0059261_0984	0.41	+0.1
1,018,630	+		Ga0059261_0984	0.43	+0.6
1,018,630	+		Ga0059261_0984	0.43	+0.2
1,018,630	+		Ga0059261_0984	0.43	+0.0
1,018,631	-		Ga0059261_0984	0.43	-0.2
1,018,631	-		Ga0059261_0984	0.43	+0.0
1,018,631	-		Ga0059261_0984	0.43	+1.2
1,018,668	+		Ga0059261_0984	0.47	+1.1
1,018,680	-		Ga0059261_0984	0.48	+0.3
1,018,680	-		Ga0059261_0984	0.48	+0.0
1,018,680	-				+0.5
1,018,680	-				+0.5
1,018,709	+		Ga0059261_0984	0.51	-1.0
1,018,710	-		Ga0059261_0984	0.51	+1.5
1,018,748	+		Ga0059261_0984	0.55	-0.0
1,018,748	+		Ga0059261_0984	0.55	-0.3
1,018,748	+		Ga0059261_0984	0.55	+0.3
1,018,748	+		Ga0059261_0984	0.55	+1.4
1,018,749	-		Ga0059261_0984	0.55	-0.6
1,018,796	+		Ga0059261_0984	0.60	+0.5
1,018,797	-		Ga0059261_0984	0.60	+0.1
1,018,797	-		Ga0059261_0984	0.60	+0.6
1,018,820	+		Ga0059261_0984	0.63	-0.0
1,018,820	+		Ga0059261_0984	0.63	-0.0
1,018,820	-		Ga0059261_0984	0.63	+1.7
1,018,821	-		Ga0059261_0984	0.63	+0.3
1,018,821	-		Ga0059261_0984	0.63	+0.9
1,018,845	+		Ga0059261_0984	0.65	-0.1
1,018,846	-		Ga0059261_0984	0.65	-1.2
1,018,894	+		Ga0059261_0984	0.70	+0.9
1,018,894	+		Ga0059261_0984	0.70	+0.4
1,018,894	+		Ga0059261_0984	0.70	+0.3
1,018,895	-		Ga0059261_0984	0.70	-0.5
1,018,895	-		Ga0059261_0984	0.70	-0.4
1,018,895	-		Ga0059261_0984	0.70	+0.2
1,018,912	-		Ga0059261_0984	0.72	-0.1
1,018,940	+		Ga0059261_0984	0.75	-0.0
1,018,941	-		Ga0059261_0984	0.75	+0.1
1,018,941	-		Ga0059261_0984	0.75	+0.5
1,018,941	-		Ga0059261_0984	0.75	+0.3
1,018,941	-		Ga0059261_0984	0.75	+0.4
1,018,958	-				-0.5
1,018,958	-		Ga0059261_0984	0.77	-0.6
1,019,009	+		Ga0059261_0984	0.82	-0.9
1,019,009	+		Ga0059261_0984	0.82	-0.2
1,019,009	+		Ga0059261_0984	0.82	+0.4
1,019,009	+		Ga0059261_0984	0.82	-0.0
1,019,010	-		Ga0059261_0984	0.82	+0.3
1,019,108	+				+1.3
1,019,108	+				+0.7
1,019,109	-				+0.5
1,019,109	-				+0.0
1,019,126	+				+0.2
1,019,182	+				+0.0
1,019,183	-				-0.2
1,019,200	+				-0.3
1,019,213	+				+0.5
1,019,213	+				+1.5
1,019,214	-				-0.2
1,019,214	-				+0.5
1,019,214	-				-0.9
1,019,247	-				+0.1
1,019,247	-				+0.9
1,019,247	-				+0.4
1,019,342	+		Ga0059261_0985	0.30	+1.9
1,019,343	-		Ga0059261_0985	0.30	+0.1
1,019,343	-		Ga0059261_0985	0.30	+1.0
1,019,343	-		Ga0059261_0985	0.30	-0.3
1,019,361	+		Ga0059261_0985	0.35	+0.3
1,019,361	+		Ga0059261_0985	0.35	-0.3
1,019,408	+		Ga0059261_0985	0.46	-0.5
1,019,409	-		Ga0059261_0985	0.46	-0.3
1,019,409	-		Ga0059261_0985	0.46	+0.2
1,019,409	-		Ga0059261_0985	0.46	+0.9
1,019,469	+		Ga0059261_0985	0.61	-0.5
1,019,469	+		Ga0059261_0985	0.61	+0.5
1,019,469	+		Ga0059261_0985	0.61	+0.4
1,019,469	+		Ga0059261_0985	0.61	+1.9
1,019,469	+		Ga0059261_0985	0.61	-0.5
1,019,469	+		Ga0059261_0985	0.61	-0.4
1,019,469	+		Ga0059261_0985	0.61	-1.0
1,019,470	-		Ga0059261_0985	0.61	+0.1
1,019,470	-				+2.5
1,019,470	-		Ga0059261_0985	0.61	-0.6
1,019,622	+				+0.3
1,019,622	+				+0.9
1,019,622	+				+0.1
1,019,622	+				-0.5
1,019,622	+				-0.5
1,019,623	-				-0.3
1,019,623	-				+1.1
1,019,623	-				-0.8
1,019,623	-				-0.2
1,019,623	-				+0.4
1,019,646	+				-0.3
1,019,647	-				+0.1
1,019,653	-				-0.1
1,019,653	-				+0.4
1,019,653	-				+0.5
1,019,673	+				-0.4
1,019,673	+				-0.0
1,019,737	+				-1.0
1,019,747	+				-0.2
1,019,762	+				-1.8