Experiment: Spectinomycin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0725 and Ga0059261_0726 are separated by 238 nucleotides Ga0059261_0726 and Ga0059261_0727 overlap by 4 nucleotides Ga0059261_0727 and Ga0059261_0728 overlap by 8 nucleotides
Ga0059261_0725: Ga0059261_0725 - Fructose-1,6-bisphosphate aldolase, at 757,440 to 758,345
_0725
Ga0059261_0726: Ga0059261_0726 - hypothetical protein, at 758,584 to 758,976
_0726
Ga0059261_0727: Ga0059261_0727 - conserved hypothetical protein, at 758,973 to 759,629
_0727
Ga0059261_0728: Ga0059261_0728 - phosphoglycerate kinase (EC 2.7.2.3), at 759,622 to 760,815
_0728
Position (kb) 758
759 Strain fitness (log2 ratio) -2
-1
0
1 at 758.224 kb on + strand, within Ga0059261_0725 at 758.225 kb on - strand, within Ga0059261_0725 at 758.245 kb on + strand at 758.245 kb on + strand, within Ga0059261_0725 at 758.246 kb on - strand, within Ga0059261_0725 at 758.298 kb on - strand at 758.352 kb on + strand at 758.353 kb on - strand at 758.403 kb on + strand at 758.404 kb on - strand at 758.404 kb on - strand at 758.416 kb on + strand at 758.416 kb on + strand at 758.417 kb on - strand at 758.417 kb on - strand at 758.417 kb on - strand at 758.531 kb on - strand at 758.531 kb on - strand at 758.585 kb on + strand at 758.585 kb on + strand at 758.864 kb on + strand, within Ga0059261_0726 at 758.865 kb on - strand, within Ga0059261_0726 at 758.865 kb on - strand, within Ga0059261_0726 at 758.865 kb on - strand, within Ga0059261_0726 at 758.865 kb on - strand, within Ga0059261_0726 at 758.954 kb on + strand at 758.954 kb on + strand at 758.954 kb on + strand at 758.955 kb on - strand at 758.955 kb on - strand at 758.955 kb on - strand at 758.993 kb on + strand at 758.993 kb on + strand at 758.993 kb on + strand at 758.993 kb on + strand at 758.993 kb on + strand at 758.994 kb on - strand at 759.031 kb on + strand at 759.032 kb on - strand at 759.207 kb on + strand, within Ga0059261_0727 at 759.207 kb on + strand, within Ga0059261_0727 at 759.207 kb on + strand, within Ga0059261_0727 at 759.207 kb on + strand, within Ga0059261_0727 at 759.207 kb on + strand at 759.208 kb on - strand, within Ga0059261_0727 at 759.208 kb on - strand, within Ga0059261_0727 at 759.229 kb on + strand, within Ga0059261_0727 at 759.230 kb on - strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.244 kb on + strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.245 kb on - strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.247 kb on + strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.248 kb on - strand, within Ga0059261_0727 at 759.555 kb on + strand, within Ga0059261_0727 at 759.556 kb on - strand, within Ga0059261_0727 at 759.556 kb on - strand, within Ga0059261_0727
Per-strain Table
Position Strand Gene LocusTag Fraction Spectinomycin 2 mg/ml remove 758,224 + Ga0059261_0725 0.87 -0.9 758,225 - Ga0059261_0725 0.87 +0.4 758,245 + -1.1 758,245 + Ga0059261_0725 0.89 +0.9 758,246 - Ga0059261_0725 0.89 +1.0 758,298 - -0.7 758,352 + -0.0 758,353 - -0.8 758,403 + +0.0 758,404 - -0.1 758,404 - +0.1 758,416 + +0.5 758,416 + +0.3 758,417 - +0.2 758,417 - -0.2 758,417 - +0.4 758,531 - +0.2 758,531 - -0.6 758,585 + +1.1 758,585 + +0.3 758,864 + Ga0059261_0726 0.71 +0.5 758,865 - Ga0059261_0726 0.72 +0.9 758,865 - Ga0059261_0726 0.72 +0.5 758,865 - Ga0059261_0726 0.72 +0.5 758,865 - Ga0059261_0726 0.72 -0.4 758,954 + +0.2 758,954 + +1.3 758,954 + -0.7 758,955 - +1.5 758,955 - +0.1 758,955 - -0.1 758,993 + -0.3 758,993 + -0.2 758,993 + +0.6 758,993 + -2.1 758,993 + -0.1 758,994 - -0.1 759,031 + +0.0 759,032 - -0.2 759,207 + Ga0059261_0727 0.36 +0.2 759,207 + Ga0059261_0727 0.36 +1.3 759,207 + Ga0059261_0727 0.36 -1.5 759,207 + Ga0059261_0727 0.36 +0.1 759,207 + +0.5 759,208 - Ga0059261_0727 0.36 +0.0 759,208 - Ga0059261_0727 0.36 -0.4 759,229 + Ga0059261_0727 0.39 -0.3 759,230 - Ga0059261_0727 0.39 +0.2 759,244 + Ga0059261_0727 0.41 -0.5 759,244 + Ga0059261_0727 0.41 +0.5 759,244 + Ga0059261_0727 0.41 -0.1 759,244 + Ga0059261_0727 0.41 -0.6 759,244 + Ga0059261_0727 0.41 -0.5 759,244 + Ga0059261_0727 0.41 -0.2 759,244 + Ga0059261_0727 0.41 -1.0 759,244 + Ga0059261_0727 0.41 +0.0 759,245 - Ga0059261_0727 0.41 +1.2 759,245 - Ga0059261_0727 0.41 -1.2 759,245 - Ga0059261_0727 0.41 +0.4 759,245 - Ga0059261_0727 0.41 -0.6 759,245 - Ga0059261_0727 0.41 -0.5 759,245 - Ga0059261_0727 0.41 +0.1 759,245 - Ga0059261_0727 0.41 -0.9 759,247 + Ga0059261_0727 0.42 +0.5 759,247 + Ga0059261_0727 0.42 +0.0 759,247 + Ga0059261_0727 0.42 +0.4 759,247 + Ga0059261_0727 0.42 -0.2 759,247 + Ga0059261_0727 0.42 -1.6 759,247 + Ga0059261_0727 0.42 +0.1 759,247 + Ga0059261_0727 0.42 +0.1 759,247 + Ga0059261_0727 0.42 -0.6 759,247 + Ga0059261_0727 0.42 -0.0 759,247 + Ga0059261_0727 0.42 -0.0 759,248 - Ga0059261_0727 0.42 -0.7 759,248 - Ga0059261_0727 0.42 -0.1 759,248 - Ga0059261_0727 0.42 -0.3 759,248 - Ga0059261_0727 0.42 +0.8 759,248 - Ga0059261_0727 0.42 +0.5 759,248 - Ga0059261_0727 0.42 +0.1 759,248 - Ga0059261_0727 0.42 +0.2 759,248 - Ga0059261_0727 0.42 -0.2 759,248 - Ga0059261_0727 0.42 +0.1 759,555 + Ga0059261_0727 0.89 +0.0 759,556 - Ga0059261_0727 0.89 -0.8 759,556 - Ga0059261_0727 0.89 +0.4
Or see this region's nucleotide sequence