Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4022

Experiment: apoplastic, chopping recovery; Green bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	apoplastic, chopping recovery; Green bean
4,788,555	+				-2.9
4,788,611	-				-2.3
4,788,645	+				+0.6
4,788,673	-				+0.8
4,788,683	+				+2.2
4,788,702	+				-3.0
4,788,703	-				-2.3
4,788,703	-				-0.1
4,788,717	-				+1.5
4,788,720	+				-0.1
4,788,720	+				-1.5
4,788,721	-				+0.5
4,788,721	-				-0.1
4,788,721	-				+0.2
4,788,721	-				-1.3
4,788,848	-		Psyr_4021	0.12	-0.8
4,788,951	+		Psyr_4021	0.27	+1.3
4,789,010	+		Psyr_4021	0.35	-1.3
4,789,010	+		Psyr_4021	0.35	-2.5
4,789,010	+		Psyr_4021	0.35	+0.5
4,789,011	-		Psyr_4021	0.35	-1.1
4,789,011	-		Psyr_4021	0.35	-1.3
4,789,011	-		Psyr_4021	0.35	-0.8
4,789,011	-		Psyr_4021	0.35	+0.3
4,789,011	-		Psyr_4021	0.35	+0.4
4,789,011	-		Psyr_4021	0.35	+1.3
4,789,011	-		Psyr_4021	0.35	+0.0
4,789,180	+		Psyr_4021	0.58	-1.1
4,789,180	+		Psyr_4021	0.58	-2.5
4,789,180	+		Psyr_4021	0.58	-0.4
4,789,180	+		Psyr_4021	0.58	-0.8
4,789,180	+		Psyr_4021	0.58	+1.3
4,789,180	+		Psyr_4021	0.58	-0.8
4,789,181	-		Psyr_4021	0.58	-1.3
4,789,181	-		Psyr_4021	0.58	-0.8
4,789,181	-		Psyr_4021	0.58	+1.5
4,789,181	-		Psyr_4021	0.58	-2.3
4,789,181	-		Psyr_4021	0.58	+0.7
4,789,181	-		Psyr_4021	0.58	-3.6
4,789,181	-		Psyr_4021	0.58	+0.8
4,789,245	-		Psyr_4021	0.67	-2.6
4,789,447	-				+0.8
4,789,447	-				+0.4
4,789,447	-				+0.0
4,789,447	-				+0.5
4,789,477	+				+0.9
4,789,477	+				+1.3
4,789,478	-				-2.9
4,789,706	-		Psyr_4022	0.23	-1.3
4,789,850	-		Psyr_4022	0.38	+3.5
4,789,870	+		Psyr_4022	0.40	+2.3
4,789,870	+		Psyr_4022	0.40	+3.3
4,789,870	+		Psyr_4022	0.40	-3.6
4,789,870	+		Psyr_4022	0.40	-1.4
4,789,871	-		Psyr_4022	0.40	+0.2
4,789,871	-		Psyr_4022	0.40	-0.2
4,789,871	-		Psyr_4022	0.40	+0.9
4,789,871	-		Psyr_4022	0.40	+1.5
4,789,911	+		Psyr_4022	0.44	+1.3
4,789,911	+		Psyr_4022	0.44	+2.0
4,789,911	+		Psyr_4022	0.44	+0.3
4,789,911	+		Psyr_4022	0.44	-1.5
4,789,911	+		Psyr_4022	0.44	-1.0
4,789,911	+		Psyr_4022	0.44	+1.3
4,789,911	+		Psyr_4022	0.44	-1.3
4,789,911	+		Psyr_4022	0.44	-2.1
4,789,911	+		Psyr_4022	0.44	-0.1
4,789,911	+		Psyr_4022	0.44	-1.8
4,789,911	+		Psyr_4022	0.44	-2.3
4,789,911	+		Psyr_4022	0.44	+1.3
4,789,911	+		Psyr_4022	0.44	-2.9
4,789,911	+		Psyr_4022	0.44	-2.2
4,789,911	+		Psyr_4022	0.44	-1.9
4,789,912	-		Psyr_4022	0.44	+0.7
4,789,912	-		Psyr_4022	0.44	+0.1
4,789,912	-		Psyr_4022	0.44	-2.0
4,789,912	-		Psyr_4022	0.44	+0.2
4,789,912	-		Psyr_4022	0.44	+0.2
4,789,912	-		Psyr_4022	0.44	-1.5
4,789,912	-		Psyr_4022	0.44	+0.4
4,789,912	-		Psyr_4022	0.44	+2.0
4,789,912	-		Psyr_4022	0.44	+0.5
4,789,912	-		Psyr_4022	0.44	-1.7
4,789,912	-		Psyr_4022	0.44	+0.3
4,789,912	-		Psyr_4022	0.44	-0.2
4,789,912	-		Psyr_4022	0.44	+0.9
4,789,912	-		Psyr_4022	0.44	-1.5
4,789,912	-		Psyr_4022	0.44	-1.0
4,789,912	-		Psyr_4022	0.44	-0.0
4,789,915	+		Psyr_4022	0.44	+1.3
4,789,915	+		Psyr_4022	0.44	-0.9
4,789,915	+		Psyr_4022	0.44	-1.3
4,789,915	+		Psyr_4022	0.44	-0.0
4,789,915	+		Psyr_4022	0.44	-0.7
4,789,915	+		Psyr_4022	0.44	-3.1
4,789,915	+		Psyr_4022	0.44	-0.4
4,789,915	+		Psyr_4022	0.44	-1.0
4,789,915	+		Psyr_4022	0.44	-1.9
4,789,915	+		Psyr_4022	0.44	-0.1
4,789,915	+		Psyr_4022	0.44	-2.3
4,789,915	+		Psyr_4022	0.44	+2.8
4,789,915	+		Psyr_4022	0.44	-1.5
4,789,915	+		Psyr_4022	0.44	+0.2
4,789,915	+		Psyr_4022	0.44	+0.9
4,789,916	-		Psyr_4022	0.44	-0.5
4,789,916	-		Psyr_4022	0.44	-0.2
4,789,916	-		Psyr_4022	0.44	+0.1
4,789,916	-		Psyr_4022	0.44	+1.9
4,789,916	-		Psyr_4022	0.44	+0.5
4,789,916	-		Psyr_4022	0.44	-3.0
4,789,916	-		Psyr_4022	0.44	+2.3
4,789,916	-		Psyr_4022	0.44	+0.9
4,789,916	-		Psyr_4022	0.44	+0.7
4,789,916	-		Psyr_4022	0.44	+0.9
4,789,916	-		Psyr_4022	0.44	+0.5
4,789,916	-		Psyr_4022	0.44	-1.0
4,789,916	-		Psyr_4022	0.44	+4.1
4,789,916	-		Psyr_4022	0.44	-1.5
4,789,916	-		Psyr_4022	0.44	+1.8
4,789,916	-		Psyr_4022	0.44	+1.9
4,789,916	-		Psyr_4022	0.44	-1.8
4,789,916	-		Psyr_4022	0.44	-0.8
4,789,916	-		Psyr_4022	0.44	+1.3
4,789,990	+		Psyr_4022	0.52	+0.4
4,789,990	+		Psyr_4022	0.52	-1.8
4,789,990	+		Psyr_4022	0.52	-2.0
4,789,990	+		Psyr_4022	0.52	-0.5
4,789,990	+		Psyr_4022	0.52	-1.6
4,789,991	-		Psyr_4022	0.52	+1.5
4,789,991	-		Psyr_4022	0.52	-0.5
4,789,991	-		Psyr_4022	0.52	-1.9
4,789,991	-		Psyr_4022	0.52	-0.5
4,789,991	-		Psyr_4022	0.52	+0.2
4,789,991	-		Psyr_4022	0.52	+1.5
4,789,991	-		Psyr_4022	0.52	+3.4
4,790,026	+		Psyr_4022	0.56	-1.6
4,790,026	+		Psyr_4022	0.56	+1.0
4,790,341	+		Psyr_4022	0.88	-1.5
4,790,381	-				+0.4
4,790,439	+				+1.2
4,790,439	+				+0.4
4,790,439	+				-1.6
4,790,439	+				+0.8
4,790,439	+				+0.5
4,790,439	+				-0.0
4,790,440	-				+0.8
4,790,440	-				-2.2
4,790,440	-				-1.2
4,790,440	-				-1.0
4,790,440	-				-2.0
4,790,440	-				+0.5
4,790,440	-				+0.4
4,790,440	-				+0.5
4,790,475	+				-3.2
4,790,476	-				-0.5
4,790,928	-		Psyr_4023	0.30	+0.1
4,790,940	+		Psyr_4023	0.31	+0.2
4,790,961	-		Psyr_4023	0.32	-0.1
4,791,063	-		Psyr_4023	0.39	-1.1
4,791,063	-		Psyr_4023	0.39	-1.6
4,791,063	-		Psyr_4023	0.39	+0.4
4,791,063	-		Psyr_4023	0.39	+0.4
4,791,093	+		Psyr_4023	0.41	+0.3
4,791,093	+		Psyr_4023	0.41	-0.1
4,791,093	+		Psyr_4023	0.41	+1.5
4,791,093	+		Psyr_4023	0.41	-0.2
4,791,093	+		Psyr_4023	0.41	+0.9
4,791,093	+		Psyr_4023	0.41	-2.2
4,791,093	+		Psyr_4023	0.41	+0.2
4,791,093	+		Psyr_4023	0.41	+2.9
4,791,093	+		Psyr_4023	0.41	-2.1
4,791,093	+				-0.5
4,791,093	+		Psyr_4023	0.41	-0.2
4,791,093	+		Psyr_4023	0.41	+0.6
4,791,093	+		Psyr_4023	0.41	-0.8
4,791,093	+		Psyr_4023	0.41	+0.8
4,791,093	+		Psyr_4023	0.41	-1.9
4,791,093	+		Psyr_4023	0.41	-2.1
4,791,093	+		Psyr_4023	0.41	-1.5
4,791,093	+		Psyr_4023	0.41	+1.3
4,791,093	+		Psyr_4023	0.41	+1.7
4,791,093	+		Psyr_4023	0.41	+1.5
4,791,093	+		Psyr_4023	0.41	-1.1
4,791,093	+		Psyr_4023	0.41	+0.9
4,791,094	-		Psyr_4023	0.41	+0.9
4,791,094	-		Psyr_4023	0.41	+1.3
4,791,094	-		Psyr_4023	0.41	-0.5
4,791,094	-		Psyr_4023	0.41	+1.6
4,791,094	-		Psyr_4023	0.41	-0.8
4,791,094	-		Psyr_4023	0.41	-0.2
4,791,094	-		Psyr_4023	0.41	+0.3
4,791,094	-		Psyr_4023	0.41	+1.2
4,791,094	-		Psyr_4023	0.41	+2.0
4,791,094	-		Psyr_4023	0.41	-2.3
4,791,094	-		Psyr_4023	0.41	+0.8
4,791,094	-		Psyr_4023	0.41	-1.7
4,791,094	-		Psyr_4023	0.41	+1.9
4,791,094	-		Psyr_4023	0.41	-1.5
4,791,094	-		Psyr_4023	0.41	-0.3
4,791,094	-		Psyr_4023	0.41	+0.6
4,791,095	+		Psyr_4023	0.41	-1.9
4,791,095	+		Psyr_4023	0.41	-2.4
4,791,095	+		Psyr_4023	0.41	-0.8
4,791,095	+		Psyr_4023	0.41	+0.3
4,791,095	+		Psyr_4023	0.41	-0.7
4,791,095	+		Psyr_4023	0.41	+1.3
4,791,095	+		Psyr_4023	0.41	+1.1
4,791,095	+		Psyr_4023	0.41	-0.1
4,791,095	+		Psyr_4023	0.41	-2.6
4,791,095	+		Psyr_4023	0.41	+1.5
4,791,095	+		Psyr_4023	0.41	-0.1
4,791,095	+		Psyr_4023	0.41	+0.4
4,791,095	+		Psyr_4023	0.41	-2.3
4,791,095	+		Psyr_4023	0.41	-2.2
4,791,095	+		Psyr_4023	0.41	-0.7
4,791,095	+		Psyr_4023	0.41	+1.5
4,791,095	+		Psyr_4023	0.41	+0.8
4,791,095	+		Psyr_4023	0.41	+0.4
4,791,095	+		Psyr_4023	0.41	-2.6
4,791,095	+		Psyr_4023	0.41	-2.2
4,791,095	+		Psyr_4023	0.41	+0.7
4,791,095	+		Psyr_4023	0.41	-0.5
4,791,095	+		Psyr_4023	0.41	+0.2
4,791,096	-		Psyr_4023	0.41	-0.9
4,791,096	-		Psyr_4023	0.41	+0.7
4,791,096	-		Psyr_4023	0.41	+3.4
4,791,096	-		Psyr_4023	0.41	+0.5
4,791,096	-		Psyr_4023	0.41	-1.3
4,791,096	-		Psyr_4023	0.41	-1.4
4,791,096	-		Psyr_4023	0.41	-0.4
4,791,096	-		Psyr_4023	0.41	+0.5
4,791,096	-		Psyr_4023	0.41	-2.4
4,791,096	-		Psyr_4023	0.41	-0.6
4,791,119	+		Psyr_4023	0.42	+0.5
4,791,119	+		Psyr_4023	0.42	+1.8
4,791,119	+		Psyr_4023	0.42	+1.1
4,791,120	-		Psyr_4023	0.42	+1.3
4,791,120	-		Psyr_4023	0.42	+2.0
4,791,156	+		Psyr_4023	0.45	+0.7
4,791,156	+		Psyr_4023	0.45	-1.6
4,791,156	+		Psyr_4023	0.45	+0.5
4,791,156	+		Psyr_4023	0.45	-1.2
4,791,156	+		Psyr_4023	0.45	+0.7
4,791,156	+		Psyr_4023	0.45	-1.2
4,791,156	+		Psyr_4023	0.45	+1.8
4,791,156	+		Psyr_4023	0.45	+1.6
4,791,157	-		Psyr_4023	0.45	-1.5
4,791,157	-		Psyr_4023	0.45	-1.4
4,791,157	-		Psyr_4023	0.45	+1.6
4,791,157	-		Psyr_4023	0.45	-1.8
4,791,157	-		Psyr_4023	0.45	-0.1
4,791,157	-		Psyr_4023	0.45	+0.9
4,791,157	-		Psyr_4023	0.45	-1.1
4,791,157	-		Psyr_4023	0.45	-0.8
4,791,203	+		Psyr_4023	0.48	-1.6
4,791,203	+		Psyr_4023	0.48	+0.9
4,791,203	+		Psyr_4023	0.48	-1.3
4,791,210	+		Psyr_4023	0.48	-1.8
4,791,232	-		Psyr_4023	0.49	+0.8
4,791,275	+		Psyr_4023	0.52	+0.5
4,791,276	-		Psyr_4023	0.52	+0.3