Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3364

Experiment: apoplastic, chopping recovery; Green bean

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	apoplastic, chopping recovery; Green bean
4,021,714	-		Psyr_3363	0.47	-0.4
4,021,936	+		Psyr_3363	0.62	-0.3
4,021,936	+		Psyr_3363	0.62	-1.3
4,021,937	-		Psyr_3363	0.62	+0.9
4,021,937	-		Psyr_3363	0.62	-1.5
4,022,226	+		Psyr_3363	0.82	-0.2
4,022,226	+		Psyr_3363	0.82	+1.5
4,022,242	+		Psyr_3363	0.83	-0.8
4,022,243	-		Psyr_3363	0.83	+0.1
4,022,366	-				-0.1
4,022,466	+				+0.2
4,022,466	+				-0.4
4,022,466	+				+0.4
4,022,466	+				+0.6
4,022,466	+				-1.7
4,022,466	+				-0.9
4,022,466	+				+0.5
4,022,467	-				+0.8
4,022,467	-				+0.9
4,022,467	-				+0.1
4,022,467	-				-2.0
4,022,467	-				-1.1
4,022,467	-				-0.4
4,022,489	-				+0.8
4,022,531	+				-0.9
4,022,531	+				+0.9
4,022,531	+				+0.6
4,022,532	-				-0.2
4,022,532	-				-1.7
4,022,621	+				-1.1
4,022,621	+				+0.5
4,022,808	+		Psyr_3364	0.16	+1.3
4,022,808	+		Psyr_3364	0.16	-1.5
4,022,808	+		Psyr_3364	0.16	+2.8
4,022,809	-		Psyr_3364	0.16	+0.4
4,022,809	-		Psyr_3364	0.16	-1.2
4,022,809	-		Psyr_3364	0.16	+1.5
4,022,815	-		Psyr_3364	0.16	-0.6
4,022,815	-		Psyr_3364	0.16	-0.4
4,022,961	+		Psyr_3364	0.29	+1.2
4,022,961	+		Psyr_3364	0.29	-1.0
4,022,961	+		Psyr_3364	0.29	-2.0
4,022,961	+		Psyr_3364	0.29	+1.9
4,022,961	+		Psyr_3364	0.29	-2.0
4,022,961	+		Psyr_3364	0.29	-1.6
4,022,961	+		Psyr_3364	0.29	-1.2
4,022,961	+		Psyr_3364	0.29	+1.3
4,022,961	+		Psyr_3364	0.29	+1.6
4,022,961	+		Psyr_3364	0.29	+1.4
4,022,961	+		Psyr_3364	0.29	+1.4
4,022,961	+		Psyr_3364	0.29	-0.9
4,022,961	+		Psyr_3364	0.29	+1.5
4,022,961	+		Psyr_3364	0.29	+1.0
4,022,961	+		Psyr_3364	0.29	-1.9
4,022,962	-		Psyr_3364	0.29	-1.0
4,022,962	-		Psyr_3364	0.29	+0.3
4,022,962	-		Psyr_3364	0.29	-2.6
4,022,962	-		Psyr_3364	0.29	-2.2
4,022,962	-		Psyr_3364	0.29	-0.6
4,022,962	-		Psyr_3364	0.29	+0.1
4,022,962	-		Psyr_3364	0.29	+2.3
4,022,962	-		Psyr_3364	0.29	-2.5
4,022,962	-		Psyr_3364	0.29	-0.6
4,022,962	-		Psyr_3364	0.29	+0.7
4,022,962	-		Psyr_3364	0.29	+3.2
4,022,962	-		Psyr_3364	0.29	-0.2
4,022,962	-		Psyr_3364	0.29	+2.3
4,022,962	-		Psyr_3364	0.29	-1.2
4,022,962	-		Psyr_3364	0.29	+0.4
4,022,962	-		Psyr_3364	0.29	-0.2
4,022,962	-		Psyr_3364	0.29	+1.4
4,022,962	-		Psyr_3364	0.29	+0.8
4,022,963	+		Psyr_3364	0.29	+1.1
4,022,964	-		Psyr_3364	0.29	-0.3
4,022,964	-		Psyr_3364	0.29	-1.7
4,022,964	-		Psyr_3364	0.29	+0.9
4,023,087	+		Psyr_3364	0.40	+2.5
4,023,111	+		Psyr_3364	0.42	+0.5
4,023,111	+		Psyr_3364	0.42	+1.8
4,023,112	-		Psyr_3364	0.42	+2.3
4,023,135	+		Psyr_3364	0.44	+0.6
4,023,135	+		Psyr_3364	0.44	+0.9
4,023,136	-		Psyr_3364	0.44	-0.2
4,023,242	+		Psyr_3364	0.53	+1.4
4,023,249	+		Psyr_3364	0.54	-0.9
4,023,249	+		Psyr_3364	0.54	-3.0
4,023,249	+		Psyr_3364	0.54	+1.2
4,023,249	+		Psyr_3364	0.54	-0.9
4,023,249	+		Psyr_3364	0.54	+1.3
4,023,249	+		Psyr_3364	0.54	-0.6
4,023,249	+		Psyr_3364	0.54	-0.6
4,023,249	+		Psyr_3364	0.54	+0.2
4,023,249	+		Psyr_3364	0.54	-2.4
4,023,249	+		Psyr_3364	0.54	+1.9
4,023,249	+		Psyr_3364	0.54	+1.1
4,023,249	+		Psyr_3364	0.54	+0.2
4,023,249	+		Psyr_3364	0.54	+1.6
4,023,249	+		Psyr_3364	0.54	+1.4
4,023,249	+		Psyr_3364	0.54	-0.6
4,023,249	+		Psyr_3364	0.54	-2.2
4,023,250	-		Psyr_3364	0.54	-0.6
4,023,250	-		Psyr_3364	0.54	+2.1
4,023,250	-		Psyr_3364	0.54	-0.2
4,023,250	-		Psyr_3364	0.54	+2.9
4,023,250	-		Psyr_3364	0.54	+2.7
4,023,250	-		Psyr_3364	0.54	+0.3
4,023,250	-		Psyr_3364	0.54	-2.7
4,023,250	-		Psyr_3364	0.54	-1.8
4,023,250	-		Psyr_3364	0.54	-1.5
4,023,250	-		Psyr_3364	0.54	-1.7
4,023,250	-		Psyr_3364	0.54	-2.0
4,023,250	-		Psyr_3364	0.54	+0.4
4,023,250	-		Psyr_3364	0.54	-0.9
4,023,250	-		Psyr_3364	0.54	+3.5
4,023,250	-		Psyr_3364	0.54	+0.4
4,023,250	-		Psyr_3364	0.54	-0.6
4,023,250	-		Psyr_3364	0.54	-3.0
4,023,250	-		Psyr_3364	0.54	-1.2
4,023,251	+		Psyr_3364	0.54	+2.2
4,023,251	+		Psyr_3364	0.54	-0.9
4,023,251	+		Psyr_3364	0.54	-1.3
4,023,252	-		Psyr_3364	0.54	+0.4
4,023,252	-		Psyr_3364	0.54	-2.5
4,023,259	+		Psyr_3364	0.54	+0.6
4,023,260	-		Psyr_3364	0.55	+1.0
4,023,283	-		Psyr_3364	0.57	+1.4
4,023,383	-		Psyr_3364	0.65	+1.0
4,023,462	+		Psyr_3364	0.72	+1.4
4,023,507	+		Psyr_3364	0.76	+1.1
4,023,657	+		Psyr_3364	0.89	-3.0
4,023,658	-		Psyr_3364	0.89	+0.6
4,023,963	+		Psyr_3365	0.16	-0.3
4,023,963	+		Psyr_3365	0.16	-0.8
4,023,963	+		Psyr_3365	0.16	-0.4
4,023,964	-		Psyr_3365	0.16	-2.2
4,023,964	-		Psyr_3365	0.16	+1.1
4,023,983	+		Psyr_3365	0.18	+1.6
4,023,985	+		Psyr_3365	0.18	-0.7
4,023,985	+		Psyr_3365	0.18	-1.9
4,023,985	+		Psyr_3365	0.18	-2.2
4,023,986	-		Psyr_3365	0.18	-1.7
4,023,986	-		Psyr_3365	0.18	-2.0
4,023,986	-		Psyr_3365	0.18	-1.7
4,023,986	-		Psyr_3365	0.18	+0.6
4,023,986	-		Psyr_3365	0.18	-0.6
4,023,986	-		Psyr_3365	0.18	-1.1
4,023,986	-		Psyr_3365	0.18	-1.7
4,023,986	-		Psyr_3365	0.18	+0.8
4,023,986	-		Psyr_3365	0.18	-0.5
4,023,986	-		Psyr_3365	0.18	+2.8
4,024,226	+		Psyr_3365	0.39	+0.9
4,024,226	+		Psyr_3365	0.39	-0.4
4,024,390	+		Psyr_3365	0.53	-2.0
4,024,390	+		Psyr_3365	0.53	-1.9
4,024,390	+		Psyr_3365	0.53	+0.2
4,024,390	+		Psyr_3365	0.53	-2.6
4,024,391	-		Psyr_3365	0.53	-2.6
4,024,411	-		Psyr_3365	0.55	-1.1
4,024,411	-		Psyr_3365	0.55	+1.8
4,024,411	-		Psyr_3365	0.55	+0.6
4,024,462	+		Psyr_3365	0.60	+1.1
4,024,747	+		Psyr_3365	0.84	+0.6
4,024,747	+		Psyr_3365	0.84	+1.0
4,024,747	+		Psyr_3365	0.84	+1.6
4,024,747	+		Psyr_3365	0.84	-0.2
4,024,747	+		Psyr_3365	0.84	-1.9
4,024,747	+		Psyr_3365	0.84	-0.7
4,024,747	+		Psyr_3365	0.84	+0.3
4,024,748	-		Psyr_3365	0.84	-2.2
4,024,748	-		Psyr_3365	0.84	-0.2
4,024,748	-		Psyr_3365	0.84	+1.9
4,024,748	-		Psyr_3365	0.84	-2.4
4,024,748	-		Psyr_3365	0.84	-2.4
4,024,748	-		Psyr_3365	0.84	+1.1
4,024,748	-		Psyr_3365	0.84	-1.2
4,024,772	-		Psyr_3365	0.86	+0.2