Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_26510

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_26505 and AO356_26510 are separated by 3 nucleotidesAO356_26510 and AO356_26515 are separated by 100 nucleotides AO356_26505: AO356_26505 - non-ribosomal peptide synthetase, at 6,020,008 to 6,023,274 _26505 AO356_26510: AO356_26510 - asparagine synthase, at 6,023,278 to 6,025,173 _26510 AO356_26515: AO356_26515 - thioester reductase, at 6,025,274 to 6,028,651 _26515 Position (kb) 6023 6024 6025 6026Strain fitness (log2 ratio) -2 -1 0 1 2at 6022.315 kb on + strand, within AO356_26505at 6022.315 kb on + strand, within AO356_26505at 6022.414 kb on + strand, within AO356_26505at 6022.415 kb on - strand, within AO356_26505at 6022.415 kb on - strand, within AO356_26505at 6022.496 kb on - strand, within AO356_26505at 6022.561 kb on + strand, within AO356_26505at 6022.585 kb on + strand, within AO356_26505at 6022.662 kb on - strand, within AO356_26505at 6022.822 kb on + strand, within AO356_26505at 6022.823 kb on - strand, within AO356_26505at 6023.196 kb on + strandat 6023.197 kb on - strandat 6023.197 kb on - strandat 6023.236 kb on - strandat 6023.278 kb on - strandat 6023.506 kb on + strand, within AO356_26510at 6023.506 kb on + strand, within AO356_26510at 6023.756 kb on + strand, within AO356_26510at 6024.352 kb on - strand, within AO356_26510at 6024.359 kb on + strand, within AO356_26510at 6024.650 kb on - strand, within AO356_26510at 6024.746 kb on + strand, within AO356_26510at 6024.747 kb on - strand, within AO356_26510at 6024.747 kb on - strand, within AO356_26510at 6025.328 kb on - strandat 6025.774 kb on + strand, within AO356_26515at 6025.868 kb on - strand, within AO356_26515at 6025.922 kb on + strand, within AO356_26515at 6026.141 kb on + strand, within AO356_26515at 6026.142 kb on - strand, within AO356_26515at 6026.142 kb on - strand, within AO356_26515at 6026.142 kb on - strand, within AO356_26515at 6026.142 kb on - strand, within AO356_26515at 6026.142 kb on - strand, within AO356_26515at 6026.163 kb on - strand, within AO356_26515

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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6,022,315 + AO356_26505 0.71 +0.4
6,022,315 + AO356_26505 0.71 -0.4
6,022,414 + AO356_26505 0.74 -0.1
6,022,415 - AO356_26505 0.74 -0.2
6,022,415 - AO356_26505 0.74 +0.8
6,022,496 - AO356_26505 0.76 +0.9
6,022,561 + AO356_26505 0.78 +0.3
6,022,585 + AO356_26505 0.79 -0.2
6,022,662 - AO356_26505 0.81 -1.0
6,022,822 + AO356_26505 0.86 -0.1
6,022,823 - AO356_26505 0.86 +0.3
6,023,196 + -0.0
6,023,197 - +0.2
6,023,197 - +0.5
6,023,236 - +1.0
6,023,278 - +0.3
6,023,506 + AO356_26510 0.12 +0.2
6,023,506 + AO356_26510 0.12 -1.8
6,023,756 + AO356_26510 0.25 +1.9
6,024,352 - AO356_26510 0.57 -0.6
6,024,359 + AO356_26510 0.57 -0.2
6,024,650 - AO356_26510 0.72 -0.2
6,024,746 + AO356_26510 0.77 -0.9
6,024,747 - AO356_26510 0.77 -0.0
6,024,747 - AO356_26510 0.77 -0.1
6,025,328 - +1.2
6,025,774 + AO356_26515 0.15 -0.7
6,025,868 - AO356_26515 0.18 -0.2
6,025,922 + AO356_26515 0.19 +0.3
6,026,141 + AO356_26515 0.26 +0.6
6,026,142 - AO356_26515 0.26 +1.0
6,026,142 - AO356_26515 0.26 +1.0
6,026,142 - AO356_26515 0.26 -0.3
6,026,142 - AO356_26515 0.26 +0.5
6,026,142 - AO356_26515 0.26 +0.3
6,026,163 - AO356_26515 0.26 -0.3

Or see this region's nucleotide sequence